| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is abgT [H]
Identifier: 147674543
GI number: 147674543
Start: 418122
End: 419681
Strand: Direct
Name: abgT [H]
Synonym: VC0395_A0389
Alternate gene names: 147674543
Gene position: 418122-419681 (Clockwise)
Preceding gene: 147674019
Following gene: 147675155
Centisome position: 13.83
GC content: 48.46
Gene sequence:
>1560_bases ATGAGTAACCAAGCTATCAATCAAGCGCCATCGGCCAAACCAAGTGGGATGGATCGCTTTCTCAACTTTATTGAACGGGC AGGGAACAAGATCCCAGATCCCGCGATTCTTTTCTTTTGGGCATTAGTTATCGTTTGGGTTTCTTCCGCTCTACTCTCTA ACGTCAGTTTTGATTTGACTAACCCTCGTACTAATGAAGCATTAGAAATCAAAAACTTACTGACCGGCGAATCACTGGCT CATTTTCTGGCCAATATGGTGACCACATTTACCAGTTTTGCGCCATTGGGCATTGTTCTTGTCGCTATGCTCGGGGTTGG CGTGGCTGACTCTTCAGGCTTTATCACTACTGGCCTAAAGAAAATGCTTAATGTCACGCCAGCGAAATTGCTGACGCCTA TGCTGATTTTGGTGGCGATTATTTCGCACACCGCAGCCGATGCTGGTTATGTGTTGGTGATTCCTCTGGGCGGTATCATT TTCCACGCAGCAGGTCGTCATCCGCTCGCAGGTATTGCTGCCGCGTTTGCTGGCGTATCTGGTGGTTTCTCGGCAAACTT TATTCCGTCAGGTATCGATCCGCTGTTGGCGGGCTTTACGCAAACGGCAGCGCAAGTGTTGGATCAGTCTTATCAAGTTA ACCCATTAGCCAACATTTACTTCACGGGCCTTTCCTCAATCATCATCGTCGCGATTGGTTGGTATGTGACAGATAAAGTG ATTGAGCCACGTTTGGCGGCGACGAAAGTGGATGAGGATGCAGAATCAGCACCCGATTTGGGCTCTTTCACTGCGATTGA ATCAAAAGCTTTCCGTTACGCAGGCTGGGCAATGGTTGCGGGTATCGCACTGTTAGTGGCTGCCGTGTGGCCTGAAAATT CTGCGCTGCGTTCGCCTGACGGTGAAATTACCGCCTTCACTGCGCCGATCATGAAATCAATTGTGCCACTGATTTTTATC CTGTTTATTATCCCGGGGATTGTCTACGGCCGTGTCGCAGGAACCTTCAAAAACAGTAACGATGTGATCAAAGCAATGTC GGCCACCATGTCTACCATGGGCGCGTACATTGTGATGTCGTTTTTCTGTGCGCAATTCTTGTCTGCTTTTGGTCAATCTA ACATTGGTACTATGTTGGCTCTGTATGGTGCAGAAGGTCTAAAAGCGATGAATTTGCCGGGGCAAGCCACGATTGTGGGC ATGATTCTACTCACTGCGATGGTCAACTTATTAGTCGGTTCAGCATCGGCTAAGTGGGCGTTGATTGGTCCAATTTTGGT GCCAATGTTGATGGCAGTGGGTATTTCTCCTGAACTGTCTCAAGCGGCATATCGTGTGGGGGATTCTGTGTCTAACATTA TTTCTCCATTGATGGTGTTCTTCCCACTGGTGGTGGTGTATTGCCAACGCTATGTGAAATCAACCGGTATCGGCACTTTG GCTTCGATGATGATGCCGTACTCAATCGCTATGCTGATTGGTTGGTCACTGTTCCTGCTGGTTTACTGGGCACTGGGTAT CCCGCTGGGTATTCAAGCTCCGTACACTTACACCATGTAA
Upstream 100 bases:
>100_bases ATTGTGACCAATTTCAATGGTTCACAGGGAAACTCGAAACGGACACAGAAGGCCACACTAACAAGGCCTCACGCAGCAAC ATCACATTACGGAATTTACT
Downstream 100 bases:
>100_bases GTGATTAAACCGATAAACATCGTCAGCCCACTCCTTCGAGTGGGCTTTTTCTTAGGCTGGCTTTTGTTTTGTCCGCGATC TCCGCTAGAATCACCGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MSNQAINQAPSAKPSGMDRFLNFIERAGNKIPDPAILFFWALVIVWVSSALLSNVSFDLTNPRTNEALEIKNLLTGESLA HFLANMVTTFTSFAPLGIVLVAMLGVGVADSSGFITTGLKKMLNVTPAKLLTPMLILVAIISHTAADAGYVLVIPLGGII FHAAGRHPLAGIAAAFAGVSGGFSANFIPSGIDPLLAGFTQTAAQVLDQSYQVNPLANIYFTGLSSIIIVAIGWYVTDKV IEPRLAATKVDEDAESAPDLGSFTAIESKAFRYAGWAMVAGIALLVAAVWPENSALRSPDGEITAFTAPIMKSIVPLIFI LFIIPGIVYGRVAGTFKNSNDVIKAMSATMSTMGAYIVMSFFCAQFLSAFGQSNIGTMLALYGAEGLKAMNLPGQATIVG MILLTAMVNLLVGSASAKWALIGPILVPMLMAVGISPELSQAAYRVGDSVSNIISPLMVFFPLVVVYCQRYVKSTGIGTL ASMMMPYSIAMLIGWSLFLLVYWALGIPLGIQAPYTYTM
Sequences:
>Translated_519_residues MSNQAINQAPSAKPSGMDRFLNFIERAGNKIPDPAILFFWALVIVWVSSALLSNVSFDLTNPRTNEALEIKNLLTGESLA HFLANMVTTFTSFAPLGIVLVAMLGVGVADSSGFITTGLKKMLNVTPAKLLTPMLILVAIISHTAADAGYVLVIPLGGII FHAAGRHPLAGIAAAFAGVSGGFSANFIPSGIDPLLAGFTQTAAQVLDQSYQVNPLANIYFTGLSSIIIVAIGWYVTDKV IEPRLAATKVDEDAESAPDLGSFTAIESKAFRYAGWAMVAGIALLVAAVWPENSALRSPDGEITAFTAPIMKSIVPLIFI LFIIPGIVYGRVAGTFKNSNDVIKAMSATMSTMGAYIVMSFFCAQFLSAFGQSNIGTMLALYGAEGLKAMNLPGQATIVG MILLTAMVNLLVGSASAKWALIGPILVPMLMAVGISPELSQAAYRVGDSVSNIISPLMVFFPLVVVYCQRYVKSTGIGTL ASMMMPYSIAMLIGWSLFLLVYWALGIPLGIQAPYTYTM >Mature_518_residues SNQAINQAPSAKPSGMDRFLNFIERAGNKIPDPAILFFWALVIVWVSSALLSNVSFDLTNPRTNEALEIKNLLTGESLAH FLANMVTTFTSFAPLGIVLVAMLGVGVADSSGFITTGLKKMLNVTPAKLLTPMLILVAIISHTAADAGYVLVIPLGGIIF HAAGRHPLAGIAAAFAGVSGGFSANFIPSGIDPLLAGFTQTAAQVLDQSYQVNPLANIYFTGLSSIIIVAIGWYVTDKVI EPRLAATKVDEDAESAPDLGSFTAIESKAFRYAGWAMVAGIALLVAAVWPENSALRSPDGEITAFTAPIMKSIVPLIFIL FIIPGIVYGRVAGTFKNSNDVIKAMSATMSTMGAYIVMSFFCAQFLSAFGQSNIGTMLALYGAEGLKAMNLPGQATIVGM ILLTAMVNLLVGSASAKWALIGPILVPMLMAVGISPELSQAAYRVGDSVSNIISPLMVFFPLVVVYCQRYVKSTGIGTLA SMMMPYSIAMLIGWSLFLLVYWALGIPLGIQAPYTYTM
Specific function: Essential for aminobenzoyl-glutamate utilization. May transport aminobenzoyl-glutamate into the cell. Seems also to increase the sensitivity to low levels of aminobenzoyl-glutamate. Sufficient to confer aminobenzoyl-glutamate utilization phenotype [H]
COG id: COG2978
COG function: function code H; Putative p-aminobenzoyl-glutamate transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081879, Length=492, Percent_Identity=34.7560975609756, Blast_Score=307, Evalue=1e-84,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004697 - InterPro: IPR011540 [H]
Pfam domain/function: PF03806 ABG_transport [H]
EC number: NA
Molecular weight: Translated: 54926; Mature: 54794
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQAINQAPSAKPSGMDRFLNFIERAGNKIPDPAILFFWALVIVWVSSALLSNVSFDLT CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECC NPRTNEALEIKNLLTGESLAHFLANMVTTFTSFAPLGIVLVAMLGVGVADSSGFITTGLK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH KMLNVTPAKLLTPMLILVAIISHTAADAGYVLVIPLGGIIFHAAGRHPLAGIAAAFAGVS HHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCHHHHHHHHHHCC GGFSANFIPSGIDPLLAGFTQTAAQVLDQSYQVNPLANIYFTGLSSIIIVAIGWYVTDKV CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IEPRLAATKVDEDAESAPDLGSFTAIESKAFRYAGWAMVAGIALLVAAVWPENSALRSPD HCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GEITAFTAPIMKSIVPLIFILFIIPGIVYGRVAGTFKNSNDVIKAMSATMSTMGAYIVMS CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH FFCAQFLSAFGQSNIGTMLALYGAEGLKAMNLPGQATIVGMILLTAMVNLLVGSASAKWA HHHHHHHHHHCCCCHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH LIGPILVPMLMAVGISPELSQAAYRVGDSVSNIISPLMVFFPLVVVYCQRYVKSTGIGTL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ASMMMPYSIAMLIGWSLFLLVYWALGIPLGIQAPYTYTM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC >Mature Secondary Structure SNQAINQAPSAKPSGMDRFLNFIERAGNKIPDPAILFFWALVIVWVSSALLSNVSFDLT CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECC NPRTNEALEIKNLLTGESLAHFLANMVTTFTSFAPLGIVLVAMLGVGVADSSGFITTGLK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH KMLNVTPAKLLTPMLILVAIISHTAADAGYVLVIPLGGIIFHAAGRHPLAGIAAAFAGVS HHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCCCHHHHHHHHHHCC GGFSANFIPSGIDPLLAGFTQTAAQVLDQSYQVNPLANIYFTGLSSIIIVAIGWYVTDKV CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IEPRLAATKVDEDAESAPDLGSFTAIESKAFRYAGWAMVAGIALLVAAVWPENSALRSPD HCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC GEITAFTAPIMKSIVPLIFILFIIPGIVYGRVAGTFKNSNDVIKAMSATMSTMGAYIVMS CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH FFCAQFLSAFGQSNIGTMLALYGAEGLKAMNLPGQATIVGMILLTAMVNLLVGSASAKWA HHHHHHHHHHCCCCHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH LIGPILVPMLMAVGISPELSQAAYRVGDSVSNIISPLMVFFPLVVVYCQRYVKSTGIGTL HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ASMMMPYSIAMLIGWSLFLLVYWALGIPLGIQAPYTYTM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9829935; 9097039; 9278503; 2825131; 7567469 [H]