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The map label for this gene is ybgI [C]

Identifier: 147674477

GI number: 147674477

Start: 1807600

End: 1808370

Strand: Reverse

Name: ybgI [C]

Synonym: VC0395_A1679

Alternate gene names: 147674477

Gene position: 1808370-1807600 (Counterclockwise)

Preceding gene: 147674240

Following gene: 147673409

Centisome position: 59.8

GC content: 45.65

Gene sequence:

>771_bases
ATGGATTACAAGATGAACAATTTACAGCTAGAAGCGTTGCTAAATGAGACATTGTCCCCACAGTTAATTAAAGATTATTG
TCCTAATGGTTTACAAGTCGAAGGTAAAGTGGAAGTCAAACGAATTGTCACCGGTGTGACCGCTAGCATGGCTTTAATTG
AAGCTGCGATTGAGTTGAAAGCTGATGCTCTTCTGGTTCACCACGGCTATTTTTGGAAAAATGAACCCGAGGCCATTCGA
GGTATGAAAGGTCGCCGGATACGTACGCTTATCCAAAATGATCTTAATCTGTATGCCTACCATCTACCTTTGGATATTCA
TCCACAGTTGGGCAACAATGCTCAGCTTGCGCAGCGACTCGGGATTTGCGTTGATGGTGGGTTGGAAGGGCATCCTCAAT
CAGTTGCGATGTTTGGGCACTTTTTACAACCGTTAACCGGAGAAGAATTAGCTCATCGGATTGGCCAAGTCCTGAATCGT
ACTCCTTTGCATATTGCTCCCGATCAAGCCGATAAGCTGATTGAAACTGTCGGTTGGTGTACGGGTGGTGGGCAAGACTA
TATTGAACTCGCGGCTAGCCGAGGTTTAGATGCCTTTATTTCTGGAGAAATCTCGGAGCGTACAACCTATTCGGCACGTG
AACAGTCGATCCATTACTTTTCCGCAGGTCACCATGCTACCGAGCGCTACGGAATTAAAGCACTAGGGGAATGGCTCGCG
GAAAATCACGGCTTTGATGTGACCTTCATTGATATTGATAATCCAGTTTAG

Upstream 100 bases:

>100_bases
ATCCATTAAGTGTTTTAACTCCATCTGATCACCACCACTTTTTGACATATTTCGACATTCTAGCCTGAAATTGTTATAAC
CACGCCACCTCTGTTGCTCA

Downstream 100 bases:

>100_bases
AACAATAAAAAAGAGCGAGAAAATCTCGCTCTTTTGCTTTTGAATCAATGATTAACTGCGTTCATGCAAGGGTGTGAAAT
CGCGCAGTTTTTGACCTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MDYKMNNLQLEALLNETLSPQLIKDYCPNGLQVEGKVEVKRIVTGVTASMALIEAAIELKADALLVHHGYFWKNEPEAIR
GMKGRRIRTLIQNDLNLYAYHLPLDIHPQLGNNAQLAQRLGICVDGGLEGHPQSVAMFGHFLQPLTGEELAHRIGQVLNR
TPLHIAPDQADKLIETVGWCTGGGQDYIELAASRGLDAFISGEISERTTYSAREQSIHYFSAGHHATERYGIKALGEWLA
ENHGFDVTFIDIDNPV

Sequences:

>Translated_256_residues
MDYKMNNLQLEALLNETLSPQLIKDYCPNGLQVEGKVEVKRIVTGVTASMALIEAAIELKADALLVHHGYFWKNEPEAIR
GMKGRRIRTLIQNDLNLYAYHLPLDIHPQLGNNAQLAQRLGICVDGGLEGHPQSVAMFGHFLQPLTGEELAHRIGQVLNR
TPLHIAPDQADKLIETVGWCTGGGQDYIELAASRGLDAFISGEISERTTYSAREQSIHYFSAGHHATERYGIKALGEWLA
ENHGFDVTFIDIDNPV
>Mature_256_residues
MDYKMNNLQLEALLNETLSPQLIKDYCPNGLQVEGKVEVKRIVTGVTASMALIEAAIELKADALLVHHGYFWKNEPEAIR
GMKGRRIRTLIQNDLNLYAYHLPLDIHPQLGNNAQLAQRLGICVDGGLEGHPQSVAMFGHFLQPLTGEELAHRIGQVLNR
TPLHIAPDQADKLIETVGWCTGGGQDYIELAASRGLDAFISGEISERTTYSAREQSIHYFSAGHHATERYGIKALGEWLA
ENHGFDVTFIDIDNPV

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=251, Percent_Identity=57.3705179282869, Blast_Score=290, Evalue=5e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 28406; Mature: 28406

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYKMNNLQLEALLNETLSPQLIKDYCPNGLQVEGKVEVKRIVTGVTASMALIEAAIELK
CCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH
ADALLVHHGYFWKNEPEAIRGMKGRRIRTLIQNDLNLYAYHLPLDIHPQLGNNAQLAQRL
HCEEEEECCCCCCCCCHHHCCCCCHHHHHHHHCCCEEEEEEECEEECCCCCCCHHHHHHC
GICVDGGLEGHPQSVAMFGHFLQPLTGEELAHRIGQVLNRTPLHIAPDQADKLIETVGWC
CEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHCC
TGGGQDYIELAASRGLDAFISGEISERTTYSAREQSIHYFSAGHHATERYGIKALGEWLA
CCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHH
ENHGFDVTFIDIDNPV
CCCCCEEEEEECCCCC
>Mature Secondary Structure
MDYKMNNLQLEALLNETLSPQLIKDYCPNGLQVEGKVEVKRIVTGVTASMALIEAAIELK
CCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH
ADALLVHHGYFWKNEPEAIRGMKGRRIRTLIQNDLNLYAYHLPLDIHPQLGNNAQLAQRL
HCEEEEECCCCCCCCCHHHCCCCCHHHHHHHHCCCEEEEEEECEEECCCCCCCHHHHHHC
GICVDGGLEGHPQSVAMFGHFLQPLTGEELAHRIGQVLNRTPLHIAPDQADKLIETVGWC
CEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHCC
TGGGQDYIELAASRGLDAFISGEISERTTYSAREQSIHYFSAGHHATERYGIKALGEWLA
CCCCHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHH
ENHGFDVTFIDIDNPV
CCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]