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The map label for this gene is 147674317

Identifier: 147674317

GI number: 147674317

Start: 402719

End: 402877

Strand: Reverse

Name: 147674317

Synonym: VC0395_A0371

Alternate gene names: NA

Gene position: 402877-402719 (Counterclockwise)

Preceding gene: 147674820

Following gene: 147674631

Centisome position: 13.32

GC content: 37.11

Gene sequence:

>159_bases
ATGAATGAAATCATTAACTATGTGGTGAATAGCGGTGTCATTCATGCCAACCCATTGGCAGGGATCCGTGATGTGTTTAA
AAAACACAAAGTTGTACATATTAAAGCGCTACAACTGCATGAAATGCATTATCTTATATGTACAATATCCAGCACGTGA

Upstream 100 bases:

>100_bases
GATACCCGTTAGTAAACTTACAGCACAAATTGCCATCGCAACATGACGCCCAATTGAGTATCAAGGATTACTAGAAACCG
TAAAACACACTGCCCAACTT

Downstream 100 bases:

>100_bases
CGCGATTTTTAATTGAATGGCAAACTCACACCATGGTTCGGCCTAGCAAAGTCTCAGGCGCTCGTTGGGAATAAATCGAC
AGAGTTAATAAGCTTTGCAC

Product: phage family integrase

Products: NA

Alternate protein names: LOW QUALITY PROTEIN Integrase

Number of amino acids: Translated: 52; Mature: 52

Protein sequence:

>52_residues
MNEIINYVVNSGVIHANPLAGIRDVFKKHKVVHIKALQLHEMHYLICTISST

Sequences:

>Translated_52_residues
MNEIINYVVNSGVIHANPLAGIRDVFKKHKVVHIKALQLHEMHYLICTISST
>Mature_52_residues
MNEIINYVVNSGVIHANPLAGIRDVFKKHKVVHIKALQLHEMHYLICTISST

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5897; Mature: 5897

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEIINYVVNSGVIHANPLAGIRDVFKKHKVVHIKALQLHEMHYLICTISST
CCHHHHHHHCCCEEECCCCHHHHHHHHCCCEEEEEEEEECCEEEEEEEEECC
>Mature Secondary Structure
MNEIINYVVNSGVIHANPLAGIRDVFKKHKVVHIKALQLHEMHYLICTISST
CCHHHHHHHCCCEEECCCCHHHHHHHHCCCEEEEEEEEECCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA