| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is yigP [H]
Identifier: 147674266
GI number: 147674266
Start: 2586201
End: 2586824
Strand: Reverse
Name: yigP [H]
Synonym: VC0395_A2431
Alternate gene names: 147674266
Gene position: 2586824-2586201 (Counterclockwise)
Preceding gene: 147675615
Following gene: 147675207
Centisome position: 85.54
GC content: 50.8
Gene sequence:
>624_bases ATGTCATTGCTTGCAACCATGCCACTGTCTCCTTTGCTGACCGCGGTGATTGAAACCACGCTCAATACGCTCATCAACGA TGATCCGGCGTTAGGCCGCAAACTGCTGCGCCTGAAAGGCAAAGTGATTTCGCTGCATCTGCGAGAGTTAAATCAATCCC TGACCTTTGTGTTCAGTCAGCGCATCGATGTGATGACCGGCTTTGAAGGCCAGCCGGATTGCTATCTGGCATTAAACCTC TCGATTCTTCCTCAGTTGCGTGAGCAAGCCAATATTACCCAGTTGATCAAGCAAGATAAGCTAGAGCTGGAAGGCGATAT CCAACTGGCGCAGAAGTTTTCCGAGCTGATGACCGATTGCAAACCGGATGTGGAAGAGTGGTTATCGCGCATCACGGGTG ATGTGGTGGCACACAGTGTCGTGCATGGTGTGAAAAGCATCGTCGGCGCGCTAAAACAGCAAGCGCATAAGCATCAAAAC CACTTGGCACAGGTGCTCACTGAAGAGTGGCGGATTGCGCCGCCACCGTTGGAAATTGCCTATTTTTGCGATCAAGTGGA TGACGTGAAAAGTCACGCTGCGCGTTTAGAAGCGCGTTTGAACCAGTTACTGGAAAAAGCATGA
Upstream 100 bases:
>100_bases AAGGCATGATGGAAGAGGCGGGTTTTGAACAAACCACTTATTACAACCTGACCGGCGGCATTGTGGCGCTGCATCGTGGT TACAAATTTTAAGGGCTGCT
Downstream 100 bases:
>100_bases AACCTGCAGAGCTGAAACGTTTATACCGGATAGTTAAAGTTCAACTCGAATATGGCTTAGATGAGCTGTTGCCAGAGCAT CATCTGACCCGAGCGCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSLLATMPLSPLLTAVIETTLNTLINDDPALGRKLLRLKGKVISLHLRELNQSLTFVFSQRIDVMTGFEGQPDCYLALNL SILPQLREQANITQLIKQDKLELEGDIQLAQKFSELMTDCKPDVEEWLSRITGDVVAHSVVHGVKSIVGALKQQAHKHQN HLAQVLTEEWRIAPPPLEIAYFCDQVDDVKSHAARLEARLNQLLEKA
Sequences:
>Translated_207_residues MSLLATMPLSPLLTAVIETTLNTLINDDPALGRKLLRLKGKVISLHLRELNQSLTFVFSQRIDVMTGFEGQPDCYLALNL SILPQLREQANITQLIKQDKLELEGDIQLAQKFSELMTDCKPDVEEWLSRITGDVVAHSVVHGVKSIVGALKQQAHKHQN HLAQVLTEEWRIAPPPLEIAYFCDQVDDVKSHAARLEARLNQLLEKA >Mature_206_residues SLLATMPLSPLLTAVIETTLNTLINDDPALGRKLLRLKGKVISLHLRELNQSLTFVFSQRIDVMTGFEGQPDCYLALNLS ILPQLREQANITQLIKQDKLELEGDIQLAQKFSELMTDCKPDVEEWLSRITGDVVAHSVVHGVKSIVGALKQQAHKHQNH LAQVLTEEWRIAPPPLEIAYFCDQVDDVKSHAARLEARLNQLLEKA
Specific function: Unknown
COG id: COG3165
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI2367308, Length=201, Percent_Identity=37.3134328358209, Blast_Score=143, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003033 [H]
Pfam domain/function: PF02036 SCP2 [H]
EC number: NA
Molecular weight: Translated: 23231; Mature: 23100
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLATMPLSPLLTAVIETTLNTLINDDPALGRKLLRLKGKVISLHLRELNQSLTFVFSQ CCCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIDVMTGFEGQPDCYLALNLSILPQLREQANITQLIKQDKLELEGDIQLAQKFSELMTDC HHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KPDVEEWLSRITGDVVAHSVVHGVKSIVGALKQQAHKHQNHLAQVLTEEWRIAPPPLEIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH YFCDQVDDVKSHAARLEARLNQLLEKA HHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLLATMPLSPLLTAVIETTLNTLINDDPALGRKLLRLKGKVISLHLRELNQSLTFVFSQ CCHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RIDVMTGFEGQPDCYLALNLSILPQLREQANITQLIKQDKLELEGDIQLAQKFSELMTDC HHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KPDVEEWLSRITGDVVAHSVVHGVKSIVGALKQQAHKHQNHLAQVLTEEWRIAPPPLEIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH YFCDQVDDVKSHAARLEARLNQLLEKA HHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]