| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is hscA [H]
Identifier: 147674259
GI number: 147674259
Start: 1024835
End: 1026376
Strand: Reverse
Name: hscA [H]
Synonym: VC0395_A0987
Alternate gene names: 147674259
Gene position: 1026376-1024835 (Counterclockwise)
Preceding gene: 147674035
Following gene: 147675195
Centisome position: 33.94
GC content: 53.05
Gene sequence:
>1542_bases TTGCCATCGGGCAGCCCTGAAGATGTCAGCAAAATTTCCCCTCTGCGTGCCACTGAACTTTATTTAGAGCACTTACAAGC CGCGTGGGATCATGCGCATCCTGATGCCCCATTAGCTGAACAAGATGTCACCATTACCGTTCCTGCTTCGTTTGATCCTG CCGCCCGTGATTTAACCGCGGAAGCGGCACGTAATATTGGCCTGCAGCACTTTACTCTGCTCGAAGAACCACAAGCGGCG CTGTACAGCTGGATTGATAACCGCCATGAGCAATGGCGCAGTGAAGTGAGCGTTGGCGATGTGGTGTTAGTGATCGATAT CGGCGGCGGTACCACTGACCTCTCACTGGTCGAAGTGACCGAAGAAGAAGGCAACCTTGCCCTCAAGCGTATTGCCGTTG GCGAACATATTCTGCTCGGTGGCGATAACATGGATCTCGCCCTCGCCTATCGTCTGAAAATGAAGTTGGCGCAGGAAGGC AAAGAGCTGCAAATGTGGCAAGTACAAGCCATGACACACGCATGCCGTGATGCAAAAGAAGTACTCCTCAGCCAACCGGA TTTGGCCGCAGTGCCGATCGTGGTACCAAGCCGCGGTTCTAAACTGCTCGGCGCAACACTGAAAACCGAACTGACTCGTG AAGAAGTTCAGCAAACGCTAGTCGATGGTTTCTTCCCAGCAGTTTCTATCAACGAACATCCACAACACAAAATGCGCGGC GCACTGACTCAGATGAGTTTGCCTTACGCGCAAGATGCCGGCATCACTCGCCACATCGCCGCATTTTTAAGTAAACAAGC CAACGCGCAAGGTCAAACCGAAAGCCTGCCTTTCGCGATGGCCGGCATTCCGGGCATGGCCGCTCCACAAGCCGATTTCA TTAAGCCAAGTGCCATTTTACTTAACGGCGGTGTGCTTAAATCGACTCTGCTTGCCGATCGTTTGCTAGAAACCATCAAT GCTTGGTTAACTCAGGCCAATGCGGCTCCTGCCAAACTCCTTGCCGGAGTGGATTTGGATCTGGCAGTGGCACGTGGCGC GGCTTACTACGGCGTTGTGCGTCAAGGTCAAGGGATACGCATCCGTGGTGGTATTGCTTCGGCTTACTATGTCGGGATTG AAAGTGCGATGCCAGCCATTCCGGGCATGTTACCGCCGATGGAAGCACTCTGCGTTGCTCCATTTGGTATGGAAGAAGGC TCGAGCGCGCAAGTCGCGGATCGCCAGTTTGGCCTAGTGATTGGTGAGCCAGTGCACTTCCAATTCTATGGCTCCACCGT TCGCCGTGATGATGTTGCGGGGACTCACCTTGTCGATTGGGCCAATGATGAACTAGACGATCTGCCAACCATTCAGATCA CCTTACCTGTTTCTGAAGGTCGCCGAGCAGGAGAAGTGGTTCCGGTTACGCTGGCATCACGAGTGACTGAGCTCGGTACG CTCTATCTTGAAGCGATTGCGGCTGATAATGGCCAAAAATGGCATGTGGAATTTGATGTTCGGGATAACCCACAGAACGA ACCTACACCACAGCAACATTAA
Upstream 100 bases:
>100_bases TGCAATTGCGCGTAATTTGGGCTCAAAAACCCCGATTCGCCTAGTCGCAAGCGCCAAATCTTGATTATGCCATGCGGGCG TTAATCGTCGCGAAGCCTTT
Downstream 100 bases:
>100_bases CAAGACAGTAGCGGCATCCTTCGGGGTGCCGCTCAACCTTTATGAACACGAGGTATCGCATGTCATCACCACGTTTTCTG GTCGGCATTGATTTAGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 512
Protein sequence:
>513_residues MPSGSPEDVSKISPLRATELYLEHLQAAWDHAHPDAPLAEQDVTITVPASFDPAARDLTAEAARNIGLQHFTLLEEPQAA LYSWIDNRHEQWRSEVSVGDVVLVIDIGGGTTDLSLVEVTEEEGNLALKRIAVGEHILLGGDNMDLALAYRLKMKLAQEG KELQMWQVQAMTHACRDAKEVLLSQPDLAAVPIVVPSRGSKLLGATLKTELTREEVQQTLVDGFFPAVSINEHPQHKMRG ALTQMSLPYAQDAGITRHIAAFLSKQANAQGQTESLPFAMAGIPGMAAPQADFIKPSAILLNGGVLKSTLLADRLLETIN AWLTQANAAPAKLLAGVDLDLAVARGAAYYGVVRQGQGIRIRGGIASAYYVGIESAMPAIPGMLPPMEALCVAPFGMEEG SSAQVADRQFGLVIGEPVHFQFYGSTVRRDDVAGTHLVDWANDELDDLPTIQITLPVSEGRRAGEVVPVTLASRVTELGT LYLEAIAADNGQKWHVEFDVRDNPQNEPTPQQH
Sequences:
>Translated_513_residues MPSGSPEDVSKISPLRATELYLEHLQAAWDHAHPDAPLAEQDVTITVPASFDPAARDLTAEAARNIGLQHFTLLEEPQAA LYSWIDNRHEQWRSEVSVGDVVLVIDIGGGTTDLSLVEVTEEEGNLALKRIAVGEHILLGGDNMDLALAYRLKMKLAQEG KELQMWQVQAMTHACRDAKEVLLSQPDLAAVPIVVPSRGSKLLGATLKTELTREEVQQTLVDGFFPAVSINEHPQHKMRG ALTQMSLPYAQDAGITRHIAAFLSKQANAQGQTESLPFAMAGIPGMAAPQADFIKPSAILLNGGVLKSTLLADRLLETIN AWLTQANAAPAKLLAGVDLDLAVARGAAYYGVVRQGQGIRIRGGIASAYYVGIESAMPAIPGMLPPMEALCVAPFGMEEG SSAQVADRQFGLVIGEPVHFQFYGSTVRRDDVAGTHLVDWANDELDDLPTIQITLPVSEGRRAGEVVPVTLASRVTELGT LYLEAIAADNGQKWHVEFDVRDNPQNEPTPQQH >Mature_512_residues PSGSPEDVSKISPLRATELYLEHLQAAWDHAHPDAPLAEQDVTITVPASFDPAARDLTAEAARNIGLQHFTLLEEPQAAL YSWIDNRHEQWRSEVSVGDVVLVIDIGGGTTDLSLVEVTEEEGNLALKRIAVGEHILLGGDNMDLALAYRLKMKLAQEGK ELQMWQVQAMTHACRDAKEVLLSQPDLAAVPIVVPSRGSKLLGATLKTELTREEVQQTLVDGFFPAVSINEHPQHKMRGA LTQMSLPYAQDAGITRHIAAFLSKQANAQGQTESLPFAMAGIPGMAAPQADFIKPSAILLNGGVLKSTLLADRLLETINA WLTQANAAPAKLLAGVDLDLAVARGAAYYGVVRQGQGIRIRGGIASAYYVGIESAMPAIPGMLPPMEALCVAPFGMEEGS SAQVADRQFGLVIGEPVHFQFYGSTVRRDDVAGTHLVDWANDELDDLPTIQITLPVSEGRRAGEVVPVTLASRVTELGTL YLEAIAADNGQKWHVEFDVRDNPQNEPTPQQH
Specific function: Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by hscB [H]
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 70 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018181 - InterPro: IPR001023 - InterPro: IPR013126 - InterPro: IPR010236 [H]
Pfam domain/function: PF00012 HSP70 [H]
EC number: NA
Molecular weight: Translated: 55359; Mature: 55227
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: PS00329 HSP70_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSGSPEDVSKISPLRATELYLEHLQAAWDHAHPDAPLAEQDVTITVPASFDPAARDLTA CCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHH EAARNIGLQHFTLLEEPQAALYSWIDNRHEQWRSEVSVGDVVLVIDIGGGTTDLSLVEVT HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEE EEEGNLALKRIAVGEHILLGGDNMDLALAYRLKMKLAQEGKELQMWQVQAMTHACRDAKE CCCCCEEEEEEECCCEEEECCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH VLLSQPDLAAVPIVVPSRGSKLLGATLKTELTREEVQQTLVDGFFPAVSINEHPQHKMRG HHHCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHH ALTQMSLPYAQDAGITRHIAAFLSKQANAQGQTESLPFAMAGIPGMAAPQADFIKPSAIL HHHHHCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEE LNGGVLKSTLLADRLLETINAWLTQANAAPAKLLAGVDLDLAVARGAAYYGVVRQGQGIR EECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHCCCCEEHEEECCCCEE IRGGIASAYYVGIESAMPAIPGMLPPMEALCVAPFGMEEGSSAQVADRQFGLVIGEPVHF EECCCCEEEEEEHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCEEE QFYGSTVRRDDVAGTHLVDWANDELDDLPTIQITLPVSEGRRAGEVVPVTLASRVTELGT EEECCEECCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHH LYLEAIAADNGQKWHVEFDVRDNPQNEPTPQQH HHHHEEECCCCCEEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure PSGSPEDVSKISPLRATELYLEHLQAAWDHAHPDAPLAEQDVTITVPASFDPAARDLTA CCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHHHHHH EAARNIGLQHFTLLEEPQAALYSWIDNRHEQWRSEVSVGDVVLVIDIGGGTTDLSLVEVT HHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEE EEEGNLALKRIAVGEHILLGGDNMDLALAYRLKMKLAQEGKELQMWQVQAMTHACRDAKE CCCCCEEEEEEECCCEEEECCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH VLLSQPDLAAVPIVVPSRGSKLLGATLKTELTREEVQQTLVDGFFPAVSINEHPQHKMRG HHHCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHH ALTQMSLPYAQDAGITRHIAAFLSKQANAQGQTESLPFAMAGIPGMAAPQADFIKPSAIL HHHHHCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEE LNGGVLKSTLLADRLLETINAWLTQANAAPAKLLAGVDLDLAVARGAAYYGVVRQGQGIR EECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHCCCCEEHEEECCCCEE IRGGIASAYYVGIESAMPAIPGMLPPMEALCVAPFGMEEGSSAQVADRQFGLVIGEPVHF EECCCCEEEEEEHHHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCEEE QFYGSTVRRDDVAGTHLVDWANDELDDLPTIQITLPVSEGRRAGEVVPVTLASRVTELGT EEECCEECCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEEHHHHHHHHHHH LYLEAIAADNGQKWHVEFDVRDNPQNEPTPQQH HHHHEEECCCCCEEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA