| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is pgm [H]
Identifier: 147674240
GI number: 147674240
Start: 1809246
End: 1810892
Strand: Reverse
Name: pgm [H]
Synonym: VC0395_A1681
Alternate gene names: 147674240
Gene position: 1810892-1809246 (Counterclockwise)
Preceding gene: 147674637
Following gene: 147674477
Centisome position: 59.88
GC content: 48.94
Gene sequence:
>1647_bases ATGGCTATGCACCCTCGTGCTGGACAAAAGGCGCGACAAGAGGATCTCCATAATATCCCTGCGCTAGTTGCAAATTACTA CCTACTCCAGCCTGAAGCTGGCAATACGGCGCATAAAGTTGAATTTGGTACGTCGGGACACCGAGGTACGGCCGATAAAA CTACCTTTAATGAGCATCATATTCTTGCGATTGCGCAAGCGGTAGCGGATGTGCGCCATGAACATGGTGTGACTGGCCCA ATCTTTATTGGCAAAGATACTCATGCGCTGTCTGAACCTGCATTCAGTAGTGTTCTGGAAGTGTTGATTGCCAATGGCAT TGAAGTGATTGTGCAAGAAAACAACGGTTACACACCAACGCCGGGCATTTCACACGCTATTTTAACGTACAACCTGAAGC ATGCAGATAAAGCGGACGGCATTGTGATTACCCCTTCGCACAACCCGCCACAAGATGGTGGCATCAAATACAACCCACCA CACGGTGGCCCGGCGGAAGGGGAGTTAACCCAAGCGATTGAAGATCGTGCCAATGCTTACATCAGTCAGCAGCTTGCTGG TGTAAAACGCATGCCGATTGCGTTGGCTAAACAATCCGAGTTGCTCAAGCAAGTCGATTTGGTTAAGCCTTACGTTGATG ATCTGGTCAATGTGGTTGATATGGCGGCAATCCAAAAGGCCAAGCTCAAAATTGGGGTCGATCCTCTGGGTGGCAGTGGC ATTGATTACTGGCGTCAAATTGGCAACGCTTACCAACTCGATTTAACGCTGGTCAGCGAAGCCATTGATCCAAGCTTCCA ATTCATGTCATTAGATAAAGATGGCGTGATCCGTATGGATTGCTCTTCTCCATATGCCATGGCGGGTTTGCTGGCCCTGA AAGATGAATACGACTTGGCTTTTGGTAACGATCCTGACTACGACCGTCACGGCATTGTGACCCCTAAAGGCTTGATGAAT CCGAATCACTTCCTCGCGGTGTGCATTGATTATCTGTACCGTCATCGTCAAGGTTGGGCGGGCCATGTTGCCGTCGGTAA AACGCTGGTTTCCAGTGCGATGATTGATAAAGTGGTTGCCGATCTTGGCCGCGAACTGTGTGAAGTTCCAGTAGGCTTCA AATGGTTTGTTGATGGGCTCTACTCTGGTCGCTTTGGTTTTGGCGGTGAAGAGAGTGCGGGGGCTTCTTTCCTGCGTCAA GATGGCACGCCTTGGTCTACCGACAAAGATGGGATCATTTTGTGCTTACTGGCAGCGGAAATTACCGCTGTGACCGGCAA AAATCCGCAACAGTATTATGATGAATTGGCAGCTAAACACGGTGATTCTTATTACAGCCGTATTCAAGCCGTGGCGAATG GTCCACAGAAGAATGTGCTAAAGAAACTGTCTCCTGAAATGGTGTCGGCTCAAACGCTAGCGGGAGATGCAATTACGGCT CGCTTGACTCATGCTCCGGGTAATGGCGCAGCCATTGGCGGCCTCAAAGTGACTACGGATTATGGTTGGTTTGCGGCTCG TCCATCTGGCACAGAAGATATCTATAAGATTTATTGTGAGAGCTTCAAAGGGGCTGAGCACTTAAAACAAATTGAATCTG AAGCGCAGCAGATCGTAAACCAAGTGTTTAAAGACGCGGGTTTATAA
Upstream 100 bases:
>100_bases GATTACAGCCCAAAATTCTGATTCAAGCCTCATAATGCGTAGTGCTACACCGCTATTATGAGGTTTTATTTTATGTGAAA TTTAAAGAAAGGATGTCACT
Downstream 100 bases:
>100_bases TGTGATGAAATGAATCAGGGGCGATGAGATCGCCCCTTTTTTATGTCTCTTAACGCTGTGGCCACTGGTTTGGCACAATA AACCAGAATTTCCCAGATTC
Product: phosphoglucomutase
Products: NA
Alternate protein names: PGM; Glucose phosphomutase [H]
Number of amino acids: Translated: 548; Mature: 547
Protein sequence:
>548_residues MAMHPRAGQKARQEDLHNIPALVANYYLLQPEAGNTAHKVEFGTSGHRGTADKTTFNEHHILAIAQAVADVRHEHGVTGP IFIGKDTHALSEPAFSSVLEVLIANGIEVIVQENNGYTPTPGISHAILTYNLKHADKADGIVITPSHNPPQDGGIKYNPP HGGPAEGELTQAIEDRANAYISQQLAGVKRMPIALAKQSELLKQVDLVKPYVDDLVNVVDMAAIQKAKLKIGVDPLGGSG IDYWRQIGNAYQLDLTLVSEAIDPSFQFMSLDKDGVIRMDCSSPYAMAGLLALKDEYDLAFGNDPDYDRHGIVTPKGLMN PNHFLAVCIDYLYRHRQGWAGHVAVGKTLVSSAMIDKVVADLGRELCEVPVGFKWFVDGLYSGRFGFGGEESAGASFLRQ DGTPWSTDKDGIILCLLAAEITAVTGKNPQQYYDELAAKHGDSYYSRIQAVANGPQKNVLKKLSPEMVSAQTLAGDAITA RLTHAPGNGAAIGGLKVTTDYGWFAARPSGTEDIYKIYCESFKGAEHLKQIESEAQQIVNQVFKDAGL
Sequences:
>Translated_548_residues MAMHPRAGQKARQEDLHNIPALVANYYLLQPEAGNTAHKVEFGTSGHRGTADKTTFNEHHILAIAQAVADVRHEHGVTGP IFIGKDTHALSEPAFSSVLEVLIANGIEVIVQENNGYTPTPGISHAILTYNLKHADKADGIVITPSHNPPQDGGIKYNPP HGGPAEGELTQAIEDRANAYISQQLAGVKRMPIALAKQSELLKQVDLVKPYVDDLVNVVDMAAIQKAKLKIGVDPLGGSG IDYWRQIGNAYQLDLTLVSEAIDPSFQFMSLDKDGVIRMDCSSPYAMAGLLALKDEYDLAFGNDPDYDRHGIVTPKGLMN PNHFLAVCIDYLYRHRQGWAGHVAVGKTLVSSAMIDKVVADLGRELCEVPVGFKWFVDGLYSGRFGFGGEESAGASFLRQ DGTPWSTDKDGIILCLLAAEITAVTGKNPQQYYDELAAKHGDSYYSRIQAVANGPQKNVLKKLSPEMVSAQTLAGDAITA RLTHAPGNGAAIGGLKVTTDYGWFAARPSGTEDIYKIYCESFKGAEHLKQIESEAQQIVNQVFKDAGL >Mature_547_residues AMHPRAGQKARQEDLHNIPALVANYYLLQPEAGNTAHKVEFGTSGHRGTADKTTFNEHHILAIAQAVADVRHEHGVTGPI FIGKDTHALSEPAFSSVLEVLIANGIEVIVQENNGYTPTPGISHAILTYNLKHADKADGIVITPSHNPPQDGGIKYNPPH GGPAEGELTQAIEDRANAYISQQLAGVKRMPIALAKQSELLKQVDLVKPYVDDLVNVVDMAAIQKAKLKIGVDPLGGSGI DYWRQIGNAYQLDLTLVSEAIDPSFQFMSLDKDGVIRMDCSSPYAMAGLLALKDEYDLAFGNDPDYDRHGIVTPKGLMNP NHFLAVCIDYLYRHRQGWAGHVAVGKTLVSSAMIDKVVADLGRELCEVPVGFKWFVDGLYSGRFGFGGEESAGASFLRQD GTPWSTDKDGIILCLLAAEITAVTGKNPQQYYDELAAKHGDSYYSRIQAVANGPQKNVLKKLSPEMVSAQTLAGDAITAR LTHAPGNGAAIGGLKVTTDYGWFAARPSGTEDIYKIYCESFKGAEHLKQIESEAQQIVNQVFKDAGL
Specific function: This enzyme participates in both the breakdown and synthesis of glucose [H]
COG id: COG0033
COG function: function code G; Phosphoglucomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI133922562, Length=408, Percent_Identity=27.2058823529412, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI290463102, Length=441, Percent_Identity=24.9433106575964, Blast_Score=90, Evalue=6e-18, Organism=Homo sapiens, GI21361621, Length=436, Percent_Identity=24.5412844036697, Blast_Score=84, Evalue=3e-16, Organism=Escherichia coli, GI1786904, Length=546, Percent_Identity=70.1465201465201, Blast_Score=792, Evalue=0.0, Organism=Caenorhabditis elegans, GI17535441, Length=436, Percent_Identity=26.3761467889908, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6323752, Length=443, Percent_Identity=26.86230248307, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6322722, Length=442, Percent_Identity=27.6018099547511, Blast_Score=98, Evalue=4e-21, Organism=Drosophila melanogaster, GI17864244, Length=431, Percent_Identity=25.754060324826, Blast_Score=103, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005852 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 59286; Mature: 59154
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMHPRAGQKARQEDLHNIPALVANYYLLQPEAGNTAHKVEFGTSGHRGTADKTTFNEHH CCCCCCCCCHHHHHHHHHHHHHHHCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCHH ILAIAQAVADVRHEHGVTGPIFIGKDTHALSEPAFSSVLEVLIANGIEVIVQENNGYTPT HHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCCC PGISHAILTYNLKHADKADGIVITPSHNPPQDGGIKYNPPHGGPAEGELTQAIEDRANAY CCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHH ISQQLAGVKRMPIALAKQSELLKQVDLVKPYVDDLVNVVDMAAIQKAKLKIGVDPLGGSG HHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC IDYWRQIGNAYQLDLTLVSEAIDPSFQFMSLDKDGVIRMDCSSPYAMAGLLALKDEYDLA HHHHHHCCCEEEEEHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHHCCCCCCEE FGNDPDYDRHGIVTPKGLMNPNHFLAVCIDYLYRHRQGWAGHVAVGKTLVSSAMIDKVVA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH DLGRELCEVPVGFKWFVDGLYSGRFGFGGEESAGASFLRQDGTPWSTDKDGIILCLLAAE HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEHH ITAVTGKNPQQYYDELAAKHGDSYYSRIQAVANGPQKNVLKKLSPEMVSAQTLAGDAITA HHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCEEE RLTHAPGNGAAIGGLKVTTDYGWFAARPSGTEDIYKIYCESFKGAEHLKQIESEAQQIVN EEEECCCCCCEECCEEEEECCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QVFKDAGL HHHHHCCC >Mature Secondary Structure AMHPRAGQKARQEDLHNIPALVANYYLLQPEAGNTAHKVEFGTSGHRGTADKTTFNEHH CCCCCCCCHHHHHHHHHHHHHHHCEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCHH ILAIAQAVADVRHEHGVTGPIFIGKDTHALSEPAFSSVLEVLIANGIEVIVQENNGYTPT HHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCHHHHHHHHHHHHCCEEEEEECCCCCCCC PGISHAILTYNLKHADKADGIVITPSHNPPQDGGIKYNPPHGGPAEGELTQAIEDRANAY CCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHH ISQQLAGVKRMPIALAKQSELLKQVDLVKPYVDDLVNVVDMAAIQKAKLKIGVDPLGGSG HHHHHHCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC IDYWRQIGNAYQLDLTLVSEAIDPSFQFMSLDKDGVIRMDCSSPYAMAGLLALKDEYDLA HHHHHHCCCEEEEEHHHHHHHCCCCEEEEEECCCCEEEEECCCCHHHHHHHHCCCCCCEE FGNDPDYDRHGIVTPKGLMNPNHFLAVCIDYLYRHRQGWAGHVAVGKTLVSSAMIDKVVA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH DLGRELCEVPVGFKWFVDGLYSGRFGFGGEESAGASFLRQDGTPWSTDKDGIILCLLAAE HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEHH ITAVTGKNPQQYYDELAAKHGDSYYSRIQAVANGPQKNVLKKLSPEMVSAQTLAGDAITA HHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCEEE RLTHAPGNGAAIGGLKVTTDYGWFAARPSGTEDIYKIYCESFKGAEHLKQIESEAQQIVN EEEECCCCCCEECCEEEEECCCEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH QVFKDAGL HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8083177; 8905232; 9278503; 8011018 [H]