| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674189
Identifier: 147674189
GI number: 147674189
Start: 1667297
End: 1668172
Strand: Reverse
Name: 147674189
Synonym: VC0395_A1550
Alternate gene names: NA
Gene position: 1668172-1667297 (Counterclockwise)
Preceding gene: 147673322
Following gene: 147673775
Centisome position: 55.16
GC content: 48.86
Gene sequence:
>876_bases ATGAAACGTTTGTTTTCGCTTATCGCGTTAATCATGGTTTCGGTTGCGGTAACTCCGATTGCTGAGGCCAAAAAATTCGG AGGTGGTAAGTCGTTTGGTAATAACAGTTACAAAACGGCTCCGGCACCTAAACAGCAACAACAAAAAAATGACACCGTGA AAAATGATGCGGCGAATCCAGCCAGCTCTGCGAAGAAAGGCTTAATGGGCGGTTTGCTCGGCGGTCTACTGGCAGGTGGT CTGCTTGCTGCCTTCTTTGGCGGTGCATTTGAAGGTATCCAATTTATGGATATCCTGATCATGGGTCTGATTGCGTTTGT GATCTTCAAGCTGATGCGTGCTTTTCTGGCATCGAAGCAAGGCAGCATAAACCAATCTCAGCAGCAACCGGCCTACAGCG GCATGAACCGTACGCCGTTTGAGCAACCTAATGTACACAACTTTGAACAGCCACAATCTATGGGTGGTGGTTTTGGTAGT GCCGCTCAGAGCGATGTACCCCACAATTACCCAGCCGGTTTTGACCGCGTGGCGTTTGTGAATGGTGCACGTGAACACTA TCGCATCTTGCAAGGGGCGTGGAACCATAACCAACTCGAAACGATTCGTGAGTATGTCTCTCCAAGCTTGTTTGAAGATC TTAAAGCCGAGCGTGCGAATTACGAAGGCGATCAACATACGGACGTCATGTACGTGGATGCAGAGATTGTTCGTGCAGAC TACGATGCAAACCGCGCTCAGCTCAGCTTGCAGTTCAGCGGTCGTTATCGTGACGCTGTCGAAGGTATTGAAGAAAACAT CGAGGACGTATGGCACTTAGAACGTGATCTGACAGTCCCCAATGCTCCTTGGTTGATTGTTGGTATCCAAGGTTAA
Upstream 100 bases:
>100_bases TAAATGCAAAACGTTTCCATTGCGAGATGAACTGGCTATAGTGACTTTGAGAAGATAGATCGGCTGCAAAGCCCCATAAC ATCGAACCCTAAGGAAGTGT
Downstream 100 bases:
>100_bases AAAACAGACCAACGCCCAATTTAGTCATTGTATTCAACACCCAGCGAAAGCTGGGTGTTTTTTATCACGAAAATCCGAAG CCTGCCTCAACTGCAATCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Hypothtical Protein; Import Inner Membrane Translocase Subunit; Tim44 Domain Protein; Tim44-Like Domain-Contain Protein; Tim44-Like Domain Protein
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKRLFSLIALIMVSVAVTPIAEAKKFGGGKSFGNNSYKTAPAPKQQQQKNDTVKNDAANPASSAKKGLMGGLLGGLLAGG LLAAFFGGAFEGIQFMDILIMGLIAFVIFKLMRAFLASKQGSINQSQQQPAYSGMNRTPFEQPNVHNFEQPQSMGGGFGS AAQSDVPHNYPAGFDRVAFVNGAREHYRILQGAWNHNQLETIREYVSPSLFEDLKAERANYEGDQHTDVMYVDAEIVRAD YDANRAQLSLQFSGRYRDAVEGIEENIEDVWHLERDLTVPNAPWLIVGIQG
Sequences:
>Translated_291_residues MKRLFSLIALIMVSVAVTPIAEAKKFGGGKSFGNNSYKTAPAPKQQQQKNDTVKNDAANPASSAKKGLMGGLLGGLLAGG LLAAFFGGAFEGIQFMDILIMGLIAFVIFKLMRAFLASKQGSINQSQQQPAYSGMNRTPFEQPNVHNFEQPQSMGGGFGS AAQSDVPHNYPAGFDRVAFVNGAREHYRILQGAWNHNQLETIREYVSPSLFEDLKAERANYEGDQHTDVMYVDAEIVRAD YDANRAQLSLQFSGRYRDAVEGIEENIEDVWHLERDLTVPNAPWLIVGIQG >Mature_291_residues MKRLFSLIALIMVSVAVTPIAEAKKFGGGKSFGNNSYKTAPAPKQQQQKNDTVKNDAANPASSAKKGLMGGLLGGLLAGG LLAAFFGGAFEGIQFMDILIMGLIAFVIFKLMRAFLASKQGSINQSQQQPAYSGMNRTPFEQPNVHNFEQPQSMGGGFGS AAQSDVPHNYPAGFDRVAFVNGAREHYRILQGAWNHNQLETIREYVSPSLFEDLKAERANYEGDQHTDVMYVDAEIVRAD YDANRAQLSLQFSGRYRDAVEGIEENIEDVWHLERDLTVPNAPWLIVGIQG
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31905; Mature: 31905
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLFSLIALIMVSVAVTPIAEAKKFGGGKSFGNNSYKTAPAPKQQQQKNDTVKNDAANP CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCC ASSAKKGLMGGLLGGLLAGGLLAAFFGGAFEGIQFMDILIMGLIAFVIFKLMRAFLASKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GSINQSQQQPAYSGMNRTPFEQPNVHNFEQPQSMGGGFGSAAQSDVPHNYPAGFDRVAFV CCCCCHHCCHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH NGAREHYRILQGAWNHNQLETIREYVSPSLFEDLKAERANYEGDQHTDVMYVDAEIVRAD HCHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCC YDANRAQLSLQFSGRYRDAVEGIEENIEDVWHLERDLTVPNAPWLIVGIQG CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC >Mature Secondary Structure MKRLFSLIALIMVSVAVTPIAEAKKFGGGKSFGNNSYKTAPAPKQQQQKNDTVKNDAANP CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHCCCCCC ASSAKKGLMGGLLGGLLAGGLLAAFFGGAFEGIQFMDILIMGLIAFVIFKLMRAFLASKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GSINQSQQQPAYSGMNRTPFEQPNVHNFEQPQSMGGGFGSAAQSDVPHNYPAGFDRVAFV CCCCCHHCCHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHH NGAREHYRILQGAWNHNQLETIREYVSPSLFEDLKAERANYEGDQHTDVMYVDAEIVRAD HCHHHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHCC YDANRAQLSLQFSGRYRDAVEGIEENIEDVWHLERDLTVPNAPWLIVGIQG CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA