Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

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The map label for this gene is 147674118

Identifier: 147674118

GI number: 147674118

Start: 697290

End: 697868

Strand: Direct

Name: 147674118

Synonym: VC0395_A0663

Alternate gene names: NA

Gene position: 697290-697868 (Clockwise)

Preceding gene: 147673718

Following gene: 147674903

Centisome position: 23.06

GC content: 48.19

Gene sequence:

>579_bases
ATGTCCAAGCTCCTTAAACTTGTACAAATCGGTAAGCGCGAATTGCAACTCAGCGATGAAGCTTATCGAGATTTGCTAGA
GGAAGTCACAGGCCAGCGCAGTTCGCGCGGCCTGAACGATTTCAAGCTCAGAAAAATGGTGGATAGAATGAAGTCGCTCG
GCTTTGTTCCGCAAACCAAAAGCACGCAACCACAGGCTAAGGCCACCAAGCCAAGAGCGTTAGAGGTCACCAAGCTACGC
GCAATTTGGATTACCATGCACAAGCAAGGCTTCGTGAAGAACGGCAGTGATGCAGCGTTGGATGCTTACGTAAAGCGCAT
GACCAGTATCACCAATGGCGGCAAAGGCATTGAGCGTGCAGCGTGGCTGAAATCAGAAGAGGCTTATGTTGTGCTTGAGT
CTCTAAAGCGTTGGCACTACCGTTTGATGTCGGAGGCTATTGTTGCGGCGGGTGGTCGCATTCCATCTAATGACAACTGC
ACAGGCCCGGCGGGTTATGATAAGTTGGCGTATTATTATCAGCATGATTTTATGCGTTGGTTAGAAAAGAAAAAGGAACA
ACAAAATGACTATATATGA

Upstream 100 bases:

>100_bases
TACTGGTCTGGACTTGGAATCTTTTGTCTCACAGGGGTGTTAACTTCATTTGGCGGGCAAGAGGTTACGCACTGGATGCC
AAATAATTAAGGGTAGAGAA

Downstream 100 bases:

>100_bases
AATATTAATCTCTATCATCGTTGGTTTGATTGGTGCTATCCCTCTGTTTAAGTTAGGTGGGAAAGTTGGCGCTGATATTG
GCGGCGGTGGCTTTGCTCTG

Product: protein gp16

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MSKLLKLVQIGKRELQLSDEAYRDLLEEVTGQRSSRGLNDFKLRKMVDRMKSLGFVPQTKSTQPQAKATKPRALEVTKLR
AIWITMHKQGFVKNGSDAALDAYVKRMTSITNGGKGIERAAWLKSEEAYVVLESLKRWHYRLMSEAIVAAGGRIPSNDNC
TGPAGYDKLAYYYQHDFMRWLEKKKEQQNDYI

Sequences:

>Translated_192_residues
MSKLLKLVQIGKRELQLSDEAYRDLLEEVTGQRSSRGLNDFKLRKMVDRMKSLGFVPQTKSTQPQAKATKPRALEVTKLR
AIWITMHKQGFVKNGSDAALDAYVKRMTSITNGGKGIERAAWLKSEEAYVVLESLKRWHYRLMSEAIVAAGGRIPSNDNC
TGPAGYDKLAYYYQHDFMRWLEKKKEQQNDYI
>Mature_191_residues
SKLLKLVQIGKRELQLSDEAYRDLLEEVTGQRSSRGLNDFKLRKMVDRMKSLGFVPQTKSTQPQAKATKPRALEVTKLRA
IWITMHKQGFVKNGSDAALDAYVKRMTSITNGGKGIERAAWLKSEEAYVVLESLKRWHYRLMSEAIVAAGGRIPSNDNCT
GPAGYDKLAYYYQHDFMRWLEKKKEQQNDYI

Specific function: Unknown

COG id: COG4382

COG function: function code S; Mu-like prophage protein gp16

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein gp16 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009363 [H]

Pfam domain/function: PF06252 DUF1018 [H]

EC number: NA

Molecular weight: Translated: 22036; Mature: 21904

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLLKLVQIGKRELQLSDEAYRDLLEEVTGQRSSRGLNDFKLRKMVDRMKSLGFVPQTK
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCCCCC
STQPQAKATKPRALEVTKLRAIWITMHKQGFVKNGSDAALDAYVKRMTSITNGGKGIERA
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHH
AWLKSEEAYVVLESLKRWHYRLMSEAIVAAGGRIPSNDNCTGPAGYDKLAYYYQHDFMRW
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LEKKKEQQNDYI
HHHHHHHHCCCC
>Mature Secondary Structure 
SKLLKLVQIGKRELQLSDEAYRDLLEEVTGQRSSRGLNDFKLRKMVDRMKSLGFVPQTK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHCCCCCCCC
STQPQAKATKPRALEVTKLRAIWITMHKQGFVKNGSDAALDAYVKRMTSITNGGKGIERA
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHH
AWLKSEEAYVVLESLKRWHYRLMSEAIVAAGGRIPSNDNCTGPAGYDKLAYYYQHDFMRW
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
LEKKKEQQNDYI
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]