| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is hemK [H]
Identifier: 147674049
GI number: 147674049
Start: 1875866
End: 1876726
Strand: Reverse
Name: hemK [H]
Synonym: VC0395_A1755
Alternate gene names: 147674049
Gene position: 1876726-1875866 (Counterclockwise)
Preceding gene: 147674456
Following gene: 147675215
Centisome position: 62.06
GC content: 52.03
Gene sequence:
>861_bases ATGTCAGTTACCATTGAAGCGGCATTAAAAGCGGCAACCGAGCAACTGCAGCAAAGCGGCAGTGATTCGCCAGCCCTAGA TGCCGCAGTACTCCTTTGCCATGTACTGGCTAAGCCTCGTTCTTACTTGTTGACTTGGCCTGATAAAATCTTGGAGAAGC CTACTTTGGCTTCTCTCGAGCTGCTCCTTGCTCGCCGCAGAGCGGGAGAGCCGATGGCCTACATCCTTGGTGAGCGCGAA TTTTGGTCGCTGCCGCTGAAAGTCTCTCCTTCGACACTTATTCCACGTCCGGATACGGAACGTTTGGTTGAATTAGCGCT GGATAAAGCGGCGTTGATTGATGGCGAACTGCTGGATCTTGGCACCGGAACTGGGGCGATTGCGTTGGCTTTGGCTTCGG AATTGCCCACGCGGCAAGTCACGGGGATTGATTTACGTCCGGAGGCGGCAGAGTTAGCAAGAGAAAACGCGACTCGCTTG GCGATCCACAATGCGCAGTTTTTTCAGGGCAGTTGGTTTAGCCCATTAGCAGACGGTACGAAGTTTGCTTTGATCGTCTC CAACCCGCCTTATATCGAAGAAAATGATCCGCATTTGAGTCTGGGCGATGTGCGTTTTGAGCCGAAAAGCGCGCTGGTTG CCGCAGAAAATGGTTTGGCGGACATTCGCCACATCAGCACGCACGCGCCGCGTTTTTTGCTCGATGACGGCTGGCTTTTG TTTGAGCATGGTTACGATCAAGGCGTTGCGGTGCGCACGATTATGAGTGATTTAGGCTATCAAAACATCATGACCGAGCA AGATTACGCCGGTCATGATCGAGTTACACTGGGACAATATAAAACGGAAAGAGAAGCATAA
Upstream 100 bases:
>100_bases GACCGAAGTGATGGAAGGGGATATGCAATCCTTGATTGACCCTGTGATTCACGAGCATCAAGCGGATCAATTGGCGGCAC TGGCGGATCAAAACTAATCC
Downstream 100 bases:
>100_bases TGTACGAAGGATTAAAACATTTTCACCTGTTCACTATCGGCGTCAGTGTAGTCATGCTGTCGATTCGCTATGTGCTCATG ATGATGAATTCAGCACACCT
Product: hemK protein
Products: NA
Alternate protein names: M.VchAHemK2P [H]
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSVTIEAALKAATEQLQQSGSDSPALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGERE FWSLPLKVSPSTLIPRPDTERLVELALDKAALIDGELLDLGTGTGAIALALASELPTRQVTGIDLRPEAAELARENATRL AIHNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDPHLSLGDVRFEPKSALVAAENGLADIRHISTHAPRFLLDDGWLL FEHGYDQGVAVRTIMSDLGYQNIMTEQDYAGHDRVTLGQYKTEREA
Sequences:
>Translated_286_residues MSVTIEAALKAATEQLQQSGSDSPALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGERE FWSLPLKVSPSTLIPRPDTERLVELALDKAALIDGELLDLGTGTGAIALALASELPTRQVTGIDLRPEAAELARENATRL AIHNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDPHLSLGDVRFEPKSALVAAENGLADIRHISTHAPRFLLDDGWLL FEHGYDQGVAVRTIMSDLGYQNIMTEQDYAGHDRVTLGQYKTEREA >Mature_285_residues SVTIEAALKAATEQLQQSGSDSPALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLELLLARRRAGEPMAYILGEREF WSLPLKVSPSTLIPRPDTERLVELALDKAALIDGELLDLGTGTGAIALALASELPTRQVTGIDLRPEAAELARENATRLA IHNAQFFQGSWFSPLADGTKFALIVSNPPYIEENDPHLSLGDVRFEPKSALVAAENGLADIRHISTHAPRFLLDDGWLLF EHGYDQGVAVRTIMSDLGYQNIMTEQDYAGHDRVTLGQYKTEREA
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=266, Percent_Identity=34.2105263157895, Blast_Score=94, Evalue=1e-19, Organism=Escherichia coli, GI1787463, Length=272, Percent_Identity=53.3088235294118, Blast_Score=271, Evalue=4e-74, Organism=Escherichia coli, GI87082085, Length=185, Percent_Identity=32.4324324324324, Blast_Score=85, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6324266, Length=178, Percent_Identity=31.4606741573034, Blast_Score=70, Evalue=5e-13, Organism=Drosophila melanogaster, GI24582226, Length=282, Percent_Identity=32.6241134751773, Blast_Score=115, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 31362; Mature: 31231
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTIEAALKAATEQLQQSGSDSPALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLE CCEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCHHHHH LLLARRRAGEPMAYILGEREFWSLPLKVSPSTLIPRPDTERLVELALDKAALIDGELLDL HHHHHHHCCCCCEEEECCCHHEECCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEC GTGTGAIALALASELPTRQVTGIDLRPEAAELARENATRLAIHNAQFFQGSWFSPLADGT CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCEECCCCCCCCCCCC KFALIVSNPPYIEENDPHLSLGDVRFEPKSALVAAENGLADIRHISTHAPRFLLDDGWLL EEEEEECCCCCCCCCCCCEEECCEEECCCCEEEEECCCCHHHHHHHHCCCEEEECCCEEE FEHGYDQGVAVRTIMSDLGYQNIMTEQDYAGHDRVTLGQYKTEREA EECCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCEEECCCCCCCCC >Mature Secondary Structure SVTIEAALKAATEQLQQSGSDSPALDAAVLLCHVLAKPRSYLLTWPDKILEKPTLASLE CEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCHHHHH LLLARRRAGEPMAYILGEREFWSLPLKVSPSTLIPRPDTERLVELALDKAALIDGELLDL HHHHHHHCCCCCEEEECCCHHEECCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEC GTGTGAIALALASELPTRQVTGIDLRPEAAELARENATRLAIHNAQFFQGSWFSPLADGT CCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECCCEECCCCCCCCCCCC KFALIVSNPPYIEENDPHLSLGDVRFEPKSALVAAENGLADIRHISTHAPRFLLDDGWLL EEEEEECCCCCCCCCCCCEEECCEEECCCCEEEEECCCCHHHHHHHHCCCEEEECCCEEE FEHGYDQGVAVRTIMSDLGYQNIMTEQDYAGHDRVTLGQYKTEREA EECCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]