| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674035
Identifier: 147674035
GI number: 147674035
Start: 1026413
End: 1026730
Strand: Reverse
Name: 147674035
Synonym: VC0395_A0988
Alternate gene names: NA
Gene position: 1026730-1026413 (Counterclockwise)
Preceding gene: 147673096
Following gene: 147674259
Centisome position: 33.95
GC content: 50.63
Gene sequence:
>318_bases ATGGAGATGCCAATTCATTCCGCCAAATACAGTGTAGGTATCGACCTTGGTACAACCCACTGCGTACTCGCTTATCAAGA TGTACAGAGTGAAGAGAGCCGTGTTGAAGTGATGTCGATTGCGCAAATGACAGCGCCGGGCACTGTGGAAAACCTCAACC AGCTCGGTTCTTTCGTTTATCAACCCCATGAACATGAAATGGCTGCCGCTTCACGCCGTTTGCCTTGGAGCAGTGAACCA ACTGCACTGGTCGGTGCAATTGCGCGTAATTTGGGCTCAAAAACCCCGATTCGCCTAGTCGCAAGCGCCAAATCTTGA
Upstream 100 bases:
>100_bases CTCTGATTCACAAAGGTTGGCGTGCAGATTCCATAACCCTGCCGAAACTGGCGGACAATTACGACACTTCTATCCTCGCG CCTGCGGAGGTAGAACTGTA
Downstream 100 bases:
>100_bases TTATGCCATGCGGGCGTTAATCGTCGCGAAGCCTTTTTGCCATCGGGCAGCCCTGAAGATGTCAGCAAAATTTCCCCTCT GCGTGCCACTGAACTTTATT
Product: heat shock protein 70
Products: NA
Alternate protein names: Molecular Chaperone; Heat-Shock Chaperone Protein; Heat Shock Family Protein; Molecular Chaperone Protein HspA/DNAK; Chaperone Heat-Shock Protein; Chaperone Protein HscA/DNAK; Heat Shock Protein; Heat-Shock Chaperone; DNAK-Like Protein; Molecular Chaperone-Like; Hsp70 Heat Shock Protein; Chaperone DNAK-Related Protein; Heat Shock DNAK
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MEMPIHSAKYSVGIDLGTTHCVLAYQDVQSEESRVEVMSIAQMTAPGTVENLNQLGSFVYQPHEHEMAAASRRLPWSSEP TALVGAIARNLGSKTPIRLVASAKS
Sequences:
>Translated_105_residues MEMPIHSAKYSVGIDLGTTHCVLAYQDVQSEESRVEVMSIAQMTAPGTVENLNQLGSFVYQPHEHEMAAASRRLPWSSEP TALVGAIARNLGSKTPIRLVASAKS >Mature_105_residues MEMPIHSAKYSVGIDLGTTHCVLAYQDVQSEESRVEVMSIAQMTAPGTVENLNQLGSFVYQPHEHEMAAASRRLPWSSEP TALVGAIARNLGSKTPIRLVASAKS
Specific function: Unknown
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11353; Mature: 11353
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00297 HSP70_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMPIHSAKYSVGIDLGTTHCVLAYQDVQSEESRVEVMSIAQMTAPGTVENLNQLGSFVY CCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHC QPHEHEMAAASRRLPWSSEPTALVGAIARNLGSKTPIRLVASAKS CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCC >Mature Secondary Structure MEMPIHSAKYSVGIDLGTTHCVLAYQDVQSEESRVEVMSIAQMTAPGTVENLNQLGSFVY CCCCCCCCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHC QPHEHEMAAASRRLPWSSEPTALVGAIARNLGSKTPIRLVASAKS CCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA