Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

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The map label for this gene is 147674028

Identifier: 147674028

GI number: 147674028

Start: 1491842

End: 1492882

Strand: Reverse

Name: 147674028

Synonym: VC0395_A1388

Alternate gene names: NA

Gene position: 1492882-1491842 (Counterclockwise)

Preceding gene: 147673269

Following gene: 147674768

Centisome position: 49.37

GC content: 44.0

Gene sequence:

>1041_bases
ATGGCTAACAATTTAAAAACGGATATTGTTTTAAACCTCCAGGGTGATCTTGCCCAGAAAGCGCGGTCGTATAGCAAAGA
AATGACAACGCTAGCAACACGTTCAAAAGCTGCATTTAGCATGATTAGTTCATCAGCAATAGCGGCTAGCAGAGGCATTG
ACACTTTCGGTAATCGACTGCTTTTTATTACTGGTGCTGCTGCGGTTGGTTTTGAACGTACATTCGTAAAAACTGCTGCT
GAATTTGAACGTTACCAAACGATGCTAAATAAGCTTCAAGGCTCACCAGAAGCTGGAGCTAAGGCGATGGCATGGATTGA
AGAGTTCACACAAAACACCCCTTACGCTATCGATGAAGTAACACAGTCATTTGTACGTCTAAAAGCCTTTGGTATTGATC
CTATGGATGGGACTATGCAAAGTATCGCCGATCAAGCGGCAATGATTGGCGGTACAGCAGAAACAGTTGAAGGTATCGCT
ACAGCGTTAGGTCAAGCGTGGACTAAAGGAAAACTTCAATCAGAAGAGGCTCTCCAACTACTAGAGCGAGGTGTTCCTGT
TTGGGATTACCTAATTAAATCCAGCAAAGAACTGGGAATGAACAATGGCCGTGGATTTACCAAAGAAGAGCTGGATGATA
TGTCATCTAAGGGAAAGCTAGGTAGGGATGCAATCAGGGCTTTAATTAAGCAAATGGGTAAAGAATCCGCTGGTGCAGCC
AAAGAGCAGATGAATACATGGAATGGTATGATCTCTAACATGGGCGATCACTGGAAGCTTTTTCAAAAAGATGTGATGGG
AAGCGGAGCATTCACAGTTCTAAAAGACCAATTGGGTGAGTTCTTGGGGATGCTTGATGAAATGAAAAAGACTGGCGAAT
ACGACGAGTTTGTCGATAAAGTCGGGCGTGATCTTGTTGAGGCCTTTAAATCAGCCGCTGCTGCTGCAAGAGAAATTAAA
GAGGTCGGTGAGGAACTATGGCCTGTGATTCGAGAGATTGGCTCAATGGCTTGTAGTGGCATAGTGAATTTGGTCACTTA
G

Upstream 100 bases:

>100_bases
AACGTAGGCTCACGCTATCCTGTAAGTGATTTCAATCATCAACCAATTCGTAGACTTATCCAACTCATTTTTCGATTAAA
AGAGCAGCAGTGAGATCCCC

Downstream 100 bases:

>100_bases
TTAGAGGTGATATCATCACCTCATAAGTTAACAGGTGACATTATGACAAAACGTACAAGACGACTATTTAGCGCAGAATT
TAAGTTAGAAGCAGCGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MANNLKTDIVLNLQGDLAQKARSYSKEMTTLATRSKAAFSMISSSAIAASRGIDTFGNRLLFITGAAAVGFERTFVKTAA
EFERYQTMLNKLQGSPEAGAKAMAWIEEFTQNTPYAIDEVTQSFVRLKAFGIDPMDGTMQSIADQAAMIGGTAETVEGIA
TALGQAWTKGKLQSEEALQLLERGVPVWDYLIKSSKELGMNNGRGFTKEELDDMSSKGKLGRDAIRALIKQMGKESAGAA
KEQMNTWNGMISNMGDHWKLFQKDVMGSGAFTVLKDQLGEFLGMLDEMKKTGEYDEFVDKVGRDLVEAFKSAAAAAREIK
EVGEELWPVIREIGSMACSGIVNLVT

Sequences:

>Translated_346_residues
MANNLKTDIVLNLQGDLAQKARSYSKEMTTLATRSKAAFSMISSSAIAASRGIDTFGNRLLFITGAAAVGFERTFVKTAA
EFERYQTMLNKLQGSPEAGAKAMAWIEEFTQNTPYAIDEVTQSFVRLKAFGIDPMDGTMQSIADQAAMIGGTAETVEGIA
TALGQAWTKGKLQSEEALQLLERGVPVWDYLIKSSKELGMNNGRGFTKEELDDMSSKGKLGRDAIRALIKQMGKESAGAA
KEQMNTWNGMISNMGDHWKLFQKDVMGSGAFTVLKDQLGEFLGMLDEMKKTGEYDEFVDKVGRDLVEAFKSAAAAAREIK
EVGEELWPVIREIGSMACSGIVNLVT
>Mature_345_residues
ANNLKTDIVLNLQGDLAQKARSYSKEMTTLATRSKAAFSMISSSAIAASRGIDTFGNRLLFITGAAAVGFERTFVKTAAE
FERYQTMLNKLQGSPEAGAKAMAWIEEFTQNTPYAIDEVTQSFVRLKAFGIDPMDGTMQSIADQAAMIGGTAETVEGIAT
ALGQAWTKGKLQSEEALQLLERGVPVWDYLIKSSKELGMNNGRGFTKEELDDMSSKGKLGRDAIRALIKQMGKESAGAAK
EQMNTWNGMISNMGDHWKLFQKDVMGSGAFTVLKDQLGEFLGMLDEMKKTGEYDEFVDKVGRDLVEAFKSAAAAAREIKE
VGEELWPVIREIGSMACSGIVNLVT

Specific function: Unknown

COG id: COG3941

COG function: function code R; Mu-like prophage protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phage Mu protein gp42 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013491 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37685; Mature: 37553

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANNLKTDIVLNLQGDLAQKARSYSKEMTTLATRSKAAFSMISSSAIAASRGIDTFGNRL
CCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEE
LFITGAAAVGFERTFVKTAAEFERYQTMLNKLQGSPEAGAKAMAWIEEFTQNTPYAIDEV
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHH
TQSFVRLKAFGIDPMDGTMQSIADQAAMIGGTAETVEGIATALGQAWTKGKLQSEEALQL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LERGVPVWDYLIKSSKELGMNNGRGFTKEELDDMSSKGKLGRDAIRALIKQMGKESAGAA
HHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHH
KEQMNTWNGMISNMGDHWKLFQKDVMGSGAFTVLKDQLGEFLGMLDEMKKTGEYDEFVDK
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VGRDLVEAFKSAAAAAREIKEVGEELWPVIREIGSMACSGIVNLVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ANNLKTDIVLNLQGDLAQKARSYSKEMTTLATRSKAAFSMISSSAIAASRGIDTFGNRL
CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEE
LFITGAAAVGFERTFVKTAAEFERYQTMLNKLQGSPEAGAKAMAWIEEFTQNTPYAIDEV
EEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHH
TQSFVRLKAFGIDPMDGTMQSIADQAAMIGGTAETVEGIATALGQAWTKGKLQSEEALQL
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
LERGVPVWDYLIKSSKELGMNNGRGFTKEELDDMSSKGKLGRDAIRALIKQMGKESAGAA
HHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHH
KEQMNTWNGMISNMGDHWKLFQKDVMGSGAFTVLKDQLGEFLGMLDEMKKTGEYDEFVDK
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VGRDLVEAFKSAAAAAREIKEVGEELWPVIREIGSMACSGIVNLVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]