Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

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The map label for this gene is 147674019

Identifier: 147674019

GI number: 147674019

Start: 417312

End: 417689

Strand: Direct

Name: 147674019

Synonym: VC0395_A0388

Alternate gene names: NA

Gene position: 417312-417689 (Clockwise)

Preceding gene: 147675549

Following gene: 147674543

Centisome position: 13.8

GC content: 46.03

Gene sequence:

>378_bases
ATGCGCAATAAGCAATCTGGTTTTAGCTTAATCGAAGTGATGATCTCGTTTGTACTGATTGGCGTTGGTGCGCTTGGTTT
GGTGAAATTACAAGCTTATATCGAGCAACGCGCTGATTACGCGATGCACAGTATTGAAGCGTTAAATCTTGCCGAGCAAA
AATTGGAGTGGTTTCGTTCTCGTGGCGCTTCTTCAGCTAACCCTGCCATACCAACTGCAAATTTCGCGACCGATATTGTC
TCTGGGAATGATGTTTCACATCCTTTCTATACTTTGTCTTGGTCTGTACCCGCTGCAACCTTGTCGGGGCTCTCAAAACC
ATTCATATCCAAGCGTCATGGAAGGATCGCCATGGTGAAACTCAGTCGGTGGAGTTGA

Upstream 100 bases:

>100_bases
GCGGCATTTAATAACTCCTTAGTATTTAATTTTAATAAAGATGTGATCGATCATATTGCGAGTAATTTTGTAAAACCGCG
TTGGAAAGAAGGAAGCTGGA

Downstream 100 bases:

>100_bases
AAACCATGATCTCTAAATACAGCGAATTTGACTGAACGAGTCCTTCTTGCCACGCGATTTTTCTCGCTTTATTGTGCTGT
GATTTTCGCTTCTTTATGCT

Product: putative type IV pilin

Products: NA

Alternate protein names: Tfp Pilus Assembly Protein PilV; TypIV Pilin; Type 4 Fimbrial Biogenesis Protein PilV

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MRNKQSGFSLIEVMISFVLIGVGALGLVKLQAYIEQRADYAMHSIEALNLAEQKLEWFRSRGASSANPAIPTANFATDIV
SGNDVSHPFYTLSWSVPAATLSGLSKPFISKRHGRIAMVKLSRWS

Sequences:

>Translated_125_residues
MRNKQSGFSLIEVMISFVLIGVGALGLVKLQAYIEQRADYAMHSIEALNLAEQKLEWFRSRGASSANPAIPTANFATDIV
SGNDVSHPFYTLSWSVPAATLSGLSKPFISKRHGRIAMVKLSRWS
>Mature_125_residues
MRNKQSGFSLIEVMISFVLIGVGALGLVKLQAYIEQRADYAMHSIEALNLAEQKLEWFRSRGASSANPAIPTANFATDIV
SGNDVSHPFYTLSWSVPAATLSGLSKPFISKRHGRIAMVKLSRWS

Specific function: Unknown

COG id: COG4967

COG function: function code NU; Tfp pilus assembly protein PilV

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13726; Mature: 13726

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNKQSGFSLIEVMISFVLIGVGALGLVKLQAYIEQRADYAMHSIEALNLAEQKLEWFRS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGASSANPAIPTANFATDIVSGNDVSHPFYTLSWSVPAATLSGLSKPFISKRHGRIAMVK
CCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCHHHHHHCCCHHHHCCCCCEEEEE
LSRWS
ECCCC
>Mature Secondary Structure
MRNKQSGFSLIEVMISFVLIGVGALGLVKLQAYIEQRADYAMHSIEALNLAEQKLEWFRS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGASSANPAIPTANFATDIVSGNDVSHPFYTLSWSVPAATLSGLSKPFISKRHGRIAMVK
CCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCHHHHHHCCCHHHHCCCCCEEEEE
LSRWS
ECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA