Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

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The map label for this gene is 147674013

Identifier: 147674013

GI number: 147674013

Start: 975125

End: 975622

Strand: Reverse

Name: 147674013

Synonym: VC0395_A0949

Alternate gene names: NA

Gene position: 975622-975125 (Counterclockwise)

Preceding gene: 147673864

Following gene: 147673243

Centisome position: 32.26

GC content: 48.19

Gene sequence:

>498_bases
ATGTCGGACCTGCCAACCAAAATTTTCACCAAAGAAAACTTACTCTGCCGTGACCGAGTGGGAGCCATGTTATTCCTGCT
GTTCACCCTTGGTTACGGCTATCAAACCTCACTCATCACCATGTTTCCGAGCGATGAGTTGGAACCCTTTAACGCCCGAA
CCTTACCGACCATTCTGACTTATGCTGGTATCGGTTTATCGCTGCTACTGCTCGTAGTGGGTCAGCCGGATAAAAAAAGC
GGTGCGGTGCTTGAGTTTAACTGGAAACTGCTGATCGGCTTTTTGGTACTGATGGCACTGTACGGTCTTGGCCTGACTTA
TCTCGGCTTTGTGCTGGCCACTTCCTTCTTCTTACTTGCTGGTTTTTACCTGCTAGGCGAACGACGTAAAAGCATCCTGT
TTGGTGCTTCATTCCCCTTCGTGCTCGCTTTTTATTTGTTACTGACCAAAGGACTGGATGTGTATCTAGAGCCGGGTCAT
CTGTTTACTTTCGGATAG

Upstream 100 bases:

>100_bases
TTTTGCTGGCAGTGTGACAGGTTTGGTTAATCCCCATTTATTAACTTGTGTTTACTCGGCTCTTTCTCGCACACCGTTCA
CAAACCCAATGGAGTTGGAT

Downstream 100 bases:

>100_bases
GAAATCATCATGTTAGACGGAATTTTACAAGGGCTGGCAACGGCGGTAATGCCGACCAACCTGATGATGGTCATGATCGG
CTGCTTTGTCGGCACCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Tricarboxylic Transport Membrane Protein

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSDLPTKIFTKENLLCRDRVGAMLFLLFTLGYGYQTSLITMFPSDELEPFNARTLPTILTYAGIGLSLLLLVVGQPDKKS
GAVLEFNWKLLIGFLVLMALYGLGLTYLGFVLATSFFLLAGFYLLGERRKSILFGASFPFVLAFYLLLTKGLDVYLEPGH
LFTFG

Sequences:

>Translated_165_residues
MSDLPTKIFTKENLLCRDRVGAMLFLLFTLGYGYQTSLITMFPSDELEPFNARTLPTILTYAGIGLSLLLLVVGQPDKKS
GAVLEFNWKLLIGFLVLMALYGLGLTYLGFVLATSFFLLAGFYLLGERRKSILFGASFPFVLAFYLLLTKGLDVYLEPGH
LFTFG
>Mature_164_residues
SDLPTKIFTKENLLCRDRVGAMLFLLFTLGYGYQTSLITMFPSDELEPFNARTLPTILTYAGIGLSLLLLVVGQPDKKSG
AVLEFNWKLLIGFLVLMALYGLGLTYLGFVLATSFFLLAGFYLLGERRKSILFGASFPFVLAFYLLLTKGLDVYLEPGHL
FTFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18375; Mature: 18244

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLPTKIFTKENLLCRDRVGAMLFLLFTLGYGYQTSLITMFPSDELEPFNARTLPTILT
CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHH
YAGIGLSLLLLVVGQPDKKSGAVLEFNWKLLIGFLVLMALYGLGLTYLGFVLATSFFLLA
HHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFYLLGERRKSILFGASFPFVLAFYLLLTKGLDVYLEPGHLFTFG
HHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCEEECCCEEEECC
>Mature Secondary Structure 
SDLPTKIFTKENLLCRDRVGAMLFLLFTLGYGYQTSLITMFPSDELEPFNARTLPTILT
CCCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHH
YAGIGLSLLLLVVGQPDKKSGAVLEFNWKLLIGFLVLMALYGLGLTYLGFVLATSFFLLA
HHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFYLLGERRKSILFGASFPFVLAFYLLLTKGLDVYLEPGHLFTFG
HHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCEEECCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA