| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674008
Identifier: 147674008
GI number: 147674008
Start: 1767762
End: 1768778
Strand: Reverse
Name: 147674008
Synonym: VC0395_A1648
Alternate gene names: NA
Gene position: 1768778-1767762 (Counterclockwise)
Preceding gene: 147675595
Following gene: 147674307
Centisome position: 58.49
GC content: 46.8
Gene sequence:
>1017_bases ATGAGTAGTGCATTGATATCCAGCGAACAAGCGCTGAACGATTATTTTACGGCGCTACTGGATGAAGAAACGGCCGAATT TGAGTCCACTCTCAAGCCTGAACCGGTGTGGGAGATGGCTCCTGCCATCCAGTCTGTGCCAAATAAAAGTTATTTTGATG CAGAAATTGAAGAGCTTGAGCTGCCTAATCTTGAAGATGTGCAGCGTTTGCTCAGTCAGTTGGAATCGAGTAATCCAGTA GCCGATCTGGATCTGGAACAGATTCTCGAAGAAAACACGGCAAAAATCGCTAAAATCGACCCCGTTGTTCAGCCCTGCAG CGTTGTTGAAGAGATCCAAGAGTGGGAAATCGAAACCAGCTATGTTGAGCCGGACATCGAGACGCCAGAGAGTGTTATTG AAGACGATCTCGAACCAGAGTCTGTGGATACTGAGGCAGAGCGTGAAATTGCGATAGAAACCAGCATCGAGGAACCTGTC GCTGAGGTACCGGTTGTTGAGGCGCAAGCCGTTCCAGAAACACAAGCTGGGCGCAATAAACTGGGCACTTGGACCAACAC GATCCGTGAAAAAGATTTCCAAGTCCTCTATTTTGATGTCAATGGTGTCACTTTCGCAGTGCCACTCGATGAGTTAGGTG GGATTCATCGTATGACCACACTTAACCATTTAATTGGTCGTCCGGCTTGGTATTTAGGCTTACAAACCAATCGAGATTCA CAACTTGATGTGGTTGATACAGCAAAATGGGTAATGGCTGAGAAGCTGCGTGATGAGAGTTATAAGCAAGCTTATCAGTA TATTGTGATGTTGGGAGAAAGTGCGTGGGGACTTGCCAGCACTCAACTCATGGGCACAGAGTTACTCAGTACAGAAAAAG TGCGATGGCGTGAGCAAGTCGGTAAACGGCCTTGGCTCGCGGGCATGGTGAAAGAAAAAATGTGCGCTTTGATCCATGTT CAAGCATTGATAGCTATGCTTAATGCAGGGCTTGATGTAAAAGCACTGGAAAATTAA
Upstream 100 bases:
>100_bases GCCAGTTTACAGCGACTCCCCGCTTCGCATTTTGCAGAGGGGAGCCGTGGCGTTTTCGCTTATAAGCAGCTTCTGCTTTT CTTAGAGAGGCTCGCTATCG
Downstream 100 bases:
>100_bases AACATTGGGTGTCGGAAACGACTCAGAGAGGGAAAGGTATGTCTCAGGCGAATGAAGTGAAAGTCAGAAAAGAAAAGTCG AACGATGAAGTACTTCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: CheW Domain-Containing Protein; CheW-Like Protein; CheW Domain Protein; CheW-Like Domain-Containing Protein; Chemotaxis Coupling Protein; Chemotaxis-Like Protein; Flagellar Hook-Basal Body Complex Protein FliE
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MSSALISSEQALNDYFTALLDEETAEFESTLKPEPVWEMAPAIQSVPNKSYFDAEIEELELPNLEDVQRLLSQLESSNPV ADLDLEQILEENTAKIAKIDPVVQPCSVVEEIQEWEIETSYVEPDIETPESVIEDDLEPESVDTEAEREIAIETSIEEPV AEVPVVEAQAVPETQAGRNKLGTWTNTIREKDFQVLYFDVNGVTFAVPLDELGGIHRMTTLNHLIGRPAWYLGLQTNRDS QLDVVDTAKWVMAEKLRDESYKQAYQYIVMLGESAWGLASTQLMGTELLSTEKVRWREQVGKRPWLAGMVKEKMCALIHV QALIAMLNAGLDVKALEN
Sequences:
>Translated_338_residues MSSALISSEQALNDYFTALLDEETAEFESTLKPEPVWEMAPAIQSVPNKSYFDAEIEELELPNLEDVQRLLSQLESSNPV ADLDLEQILEENTAKIAKIDPVVQPCSVVEEIQEWEIETSYVEPDIETPESVIEDDLEPESVDTEAEREIAIETSIEEPV AEVPVVEAQAVPETQAGRNKLGTWTNTIREKDFQVLYFDVNGVTFAVPLDELGGIHRMTTLNHLIGRPAWYLGLQTNRDS QLDVVDTAKWVMAEKLRDESYKQAYQYIVMLGESAWGLASTQLMGTELLSTEKVRWREQVGKRPWLAGMVKEKMCALIHV QALIAMLNAGLDVKALEN >Mature_337_residues SSALISSEQALNDYFTALLDEETAEFESTLKPEPVWEMAPAIQSVPNKSYFDAEIEELELPNLEDVQRLLSQLESSNPVA DLDLEQILEENTAKIAKIDPVVQPCSVVEEIQEWEIETSYVEPDIETPESVIEDDLEPESVDTEAEREIAIETSIEEPVA EVPVVEAQAVPETQAGRNKLGTWTNTIREKDFQVLYFDVNGVTFAVPLDELGGIHRMTTLNHLIGRPAWYLGLQTNRDSQ LDVVDTAKWVMAEKLRDESYKQAYQYIVMLGESAWGLASTQLMGTELLSTEKVRWREQVGKRPWLAGMVKEKMCALIHVQ ALIAMLNAGLDVKALEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37997; Mature: 37866
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSALISSEQALNDYFTALLDEETAEFESTLKPEPVWEMAPAIQSVPNKSYFDAEIEELE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCC LPNLEDVQRLLSQLESSNPVADLDLEQILEENTAKIAKIDPVVQPCSVVEEIQEWEIETS CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHEECCCCHHHHHHHHHHHHHCCCHHH YVEPDIETPESVIEDDLEPESVDTEAEREIAIETSIEEPVAEVPVVEAQAVPETQAGRNK CCCCCCCCCHHHHHCCCCCCCCCCHHHHHEEEECCHHCHHHHCCCCCCCCCCCHHCCCCC LGTWTNTIREKDFQVLYFDVNGVTFAVPLDELGGIHRMTTLNHLIGRPAWYLGLQTNRDS CCHHHHHHHCCCCEEEEEEECCEEEEEEHHHHCCHHHHHHHHHHHCCCEEEEEEECCCCC QLDVVDTAKWVMAEKLRDESYKQAYQYIVMLGESAWGLASTQLMGTELLSTEKVRWREQV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GKRPWLAGMVKEKMCALIHVQALIAMLNAGLDVKALEN CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC >Mature Secondary Structure SSALISSEQALNDYFTALLDEETAEFESTLKPEPVWEMAPAIQSVPNKSYFDAEIEELE CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCC LPNLEDVQRLLSQLESSNPVADLDLEQILEENTAKIAKIDPVVQPCSVVEEIQEWEIETS CCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHEECCCCHHHHHHHHHHHHHCCCHHH YVEPDIETPESVIEDDLEPESVDTEAEREIAIETSIEEPVAEVPVVEAQAVPETQAGRNK CCCCCCCCCHHHHHCCCCCCCCCCHHHHHEEEECCHHCHHHHCCCCCCCCCCCHHCCCCC LGTWTNTIREKDFQVLYFDVNGVTFAVPLDELGGIHRMTTLNHLIGRPAWYLGLQTNRDS CCHHHHHHHCCCCEEEEEEECCEEEEEEHHHHCCHHHHHHHHHHHCCCEEEEEEECCCCC QLDVVDTAKWVMAEKLRDESYKQAYQYIVMLGESAWGLASTQLMGTELLSTEKVRWREQV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GKRPWLAGMVKEKMCALIHVQALIAMLNAGLDVKALEN CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA