| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673885
Identifier: 147673885
GI number: 147673885
Start: 707450
End: 707833
Strand: Direct
Name: 147673885
Synonym: VC0395_A0680
Alternate gene names: NA
Gene position: 707450-707833 (Clockwise)
Preceding gene: 147674551
Following gene: 147674736
Centisome position: 23.39
GC content: 49.48
Gene sequence:
>384_bases ATGGCAAATGTGGATGCCGCCACCGCAGGTGTTTGGCTTCCGCTTATTCCGGCCGGAACATTTCAAGGGATTGATGGACG CACTTGGAACAACTCCAACCCTAACGCCATTATCCAGCGCTTCACTAAAAAGCGCCCATTCGATGTAGAACATTCAACCC ATATCAAAGCGCCAAACGGTGAGCCTGCACCCGCTTACGGCTGGATCACGTCACTGGAAAATCGCAACGGCGAGATTTGG GGGTTTGTGGAATTGAATGCCGAAGGCCGAGAAATGATTGAGGAGAGAAGTACGCCTTCTATTCCCCAGCGTTTGGTTAC GATAAGGAAACAGGTGTTATCTACAGCATCGAAAGTTCAGGTTTTACCAACAATCCCAACCTAA
Upstream 100 bases:
>100_bases AAAACAAGTTCATATCAACCGACCACCAAGGAGGTTGTTATGTAGTGCTTATGAACCGGAGTAATCAATGGCTAATTGTC TTACTGCCCTTTGTTTCAAC
Downstream 100 bases:
>100_bases ATGTACCCGCCCTCAACCGACAAGAGGAAAACGAAATGAAGCTACCACAGCTTATTCTCGCTGCGCTTGGCTTGGCCGAA ACCGCAACCGAGCAAGACGC
Product: I protein
Products: NA
Alternate protein names: I Protein; Mu-Like Prophage I Protein-Like Protein; Prophage MuSo2 ; Mu-Like Prophage I Protein-Like
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MANVDAATAGVWLPLIPAGTFQGIDGRTWNNSNPNAIIQRFTKKRPFDVEHSTHIKAPNGEPAPAYGWITSLENRNGEIW GFVELNAEGREMIEERSTPSIPQRLVTIRKQVLSTASKVQVLPTIPT
Sequences:
>Translated_127_residues MANVDAATAGVWLPLIPAGTFQGIDGRTWNNSNPNAIIQRFTKKRPFDVEHSTHIKAPNGEPAPAYGWITSLENRNGEIW GFVELNAEGREMIEERSTPSIPQRLVTIRKQVLSTASKVQVLPTIPT >Mature_126_residues ANVDAATAGVWLPLIPAGTFQGIDGRTWNNSNPNAIIQRFTKKRPFDVEHSTHIKAPNGEPAPAYGWITSLENRNGEIWG FVELNAEGREMIEERSTPSIPQRLVTIRKQVLSTASKVQVLPTIPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14032; Mature: 13901
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVDAATAGVWLPLIPAGTFQGIDGRTWNNSNPNAIIQRFTKKRPFDVEHSTHIKAPNG CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCC EPAPAYGWITSLENRNGEIWGFVELNAEGREMIEERSTPSIPQRLVTIRKQVLSTASKVQ CCCCCCHHEEECCCCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEE VLPTIPT EEECCCC >Mature Secondary Structure ANVDAATAGVWLPLIPAGTFQGIDGRTWNNSNPNAIIQRFTKKRPFDVEHSTHIKAPNG CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCCC EPAPAYGWITSLENRNGEIWGFVELNAEGREMIEERSTPSIPQRLVTIRKQVLSTASKVQ CCCCCCHHEEECCCCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHEE VLPTIPT EEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA