| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673865
Identifier: 147673865
GI number: 147673865
Start: 1494761
End: 1495135
Strand: Reverse
Name: 147673865
Synonym: VC0395_A1393
Alternate gene names: NA
Gene position: 1495135-1494761 (Counterclockwise)
Preceding gene: 147673501
Following gene: 147674980
Centisome position: 49.44
GC content: 39.73
Gene sequence:
>375_bases ATGTTAGCTATAGAAAGAGCAATCCCATTGGTTGTTGACGCTTTGAGCAAGGATTCGGGGCTTTTTAGCTTTGATGATCT TGAAAGCGGTGATGCTTTATATCCAGAGCTGCTAAGTGATGTTCATGACATTTTTCTTGGTGTCATTGAAGACGCAGGTA TTGAAGATAACGGGTTGGCATTACATCTGGTTTTTAAATTGATGGAATACGGCAATGGTGTGCAGTTTTACCTACCGAAG CCTGACTCTATTGTAAAAACCATTATCAAGAAAATGATGAAAAATGACTTCAACGGCAGCAACTACGTTGAATTAGCTAA GCGTTATCAGTGTTCAACGAATCATGTAAGGAGAGTTATCAATGGCACCCACTGA
Upstream 100 bases:
>100_bases CATTAAATGGCAATACATTTGCCATCAACTTAGCGTAGCCCTATCTGCAAATTTGGGTAGGGTTACGCTAGGTTCTTCGA TGTCTATATAGAGGATAACG
Downstream 100 bases:
>100_bases TAATCAAAGGTCGCTTGTGATTTCAAAACTCACTCCTAGCGCTCAAGTGCTCTACCGTGCATTAGATGAAGCCATTAAGC AAAGTGCTGGTAAACCTGAT
Product: putative transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MLAIERAIPLVVDALSKDSGLFSFDDLESGDALYPELLSDVHDIFLGVIEDAGIEDNGLALHLVFKLMEYGNGVQFYLPK PDSIVKTIIKKMMKNDFNGSNYVELAKRYQCSTNHVRRVINGTH
Sequences:
>Translated_124_residues MLAIERAIPLVVDALSKDSGLFSFDDLESGDALYPELLSDVHDIFLGVIEDAGIEDNGLALHLVFKLMEYGNGVQFYLPK PDSIVKTIIKKMMKNDFNGSNYVELAKRYQCSTNHVRRVINGTH >Mature_124_residues MLAIERAIPLVVDALSKDSGLFSFDDLESGDALYPELLSDVHDIFLGVIEDAGIEDNGLALHLVFKLMEYGNGVQFYLPK PDSIVKTIIKKMMKNDFNGSNYVELAKRYQCSTNHVRRVINGTH
Specific function: Unknown
COG id: COG5566
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13875; Mature: 13875
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAIERAIPLVVDALSKDSGLFSFDDLESGDALYPELLSDVHDIFLGVIEDAGIEDNGLA CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH LHLVFKLMEYGNGVQFYLPKPDSIVKTIIKKMMKNDFNGSNYVELAKRYQCSTNHVRRVI HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH NGTH CCCC >Mature Secondary Structure MLAIERAIPLVVDALSKDSGLFSFDDLESGDALYPELLSDVHDIFLGVIEDAGIEDNGLA CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH LHLVFKLMEYGNGVQFYLPKPDSIVKTIIKKMMKNDFNGSNYVELAKRYQCSTNHVRRVI HHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHH NGTH CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA