| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673837
Identifier: 147673837
GI number: 147673837
Start: 1868402
End: 1869550
Strand: Reverse
Name: 147673837
Synonym: VC0395_A1748
Alternate gene names: NA
Gene position: 1869550-1868402 (Counterclockwise)
Preceding gene: 147675041
Following gene: 147675026
Centisome position: 61.82
GC content: 49.96
Gene sequence:
>1149_bases ATGCGCTATTTAGCTGTGTTGATGATGGGATTGCTCACGTTTCCCGCCTTCGCCCTCACTCGAGTCAACTTGTATCAGGC AGAAGTTGCGGTCGATCCGCAGCAAAGTAACGCTGATGCGGCGGCGCGTGTCCGTGGTATGGAAGAAGTGATTGTCCGCG CTACTGGTAGCCAAGATGCGCTCAAAAATGATGCTGTGCAAAAAGCTTTGCGTCAGAGTAACCAGTACATCACCCAGATC AGCACTCAACAAGAGGGTGCTCAGTCGGTGATGCGTTTGCAATTCAGCGCGCAGCACATTCGCTCACTGTTAAGTCAAGC TCAGTTGCCATTCTGGCCTGAAAGCCGCAGTAATTTGCTGGTATGGCTGGTGGAAGAAGCCAACTACGATCGCAGCGTGA GTTGGGAACATGCAGATACGCCGTTACTGAACCAAATGAAAGTTCGCGCCCGTATTCGCGGCTTACCCTTAACGGTTCCG GTTGGTGATTTTGATGATGTAACCGGTGTGCAGGTCTCCGATTTATGGGGCGGCTTTATCAACCCGATCAGCATCGCAAG TCAACGTTATCCGACCGATGCGGTTTTGGTCGTGCGTGCTCAAGGCTCTGAACTGCGTTGGACTCTGTTTGATCAGTTGG CTAACACCATGGTGAGTCAACCGAAAGCGCCTATCTCAGGTCAAGCCTCGGGTGAGCAAGCGGTCACCGAGATGATTGAT GAAATCAGTGATTACTACGCGCGTAAAAGCGCGGTTGTAGTAAGCAGTGAATCCTCGCAATCGGTATTGGCGCAATTTAG CCCACTCGATAGCGCGCAGGATTTCTTTGTGGTTGAGAATAAACTCAAGCGCTTAAGCTCAGTTGCTTCGCTAGATATTT TGAAGGTTCAAGGTACTCAAGTGACCTTTAACGTGCATTTATTGGCCAGTGTGGAAGAGTTCACTAATGAAGTGGTGCGC ATGGGGCAGGCAGTATTGATGGATATGCCGCCAGAAGAGCCCGTCTCTGCAGACAATAATTTGCTGGAAAATAGTTCACT GGAAAATAGTGCGTCAGAAATGCCGGTAGACCCGAGCAACCCAAATAACGCTGCTGCTCAGCCACAACCTGTTCAACCTA AAACTCTCTATTTCTCTTGGCAAGGTTAA
Upstream 100 bases:
>100_bases GCGTCGCACAAATTCTGACGCACTCCTGTAACCTCTCGCCTTGCTGAACTTTAGATAGTTGCTTATCATCGTCGTTCAGT AAACAGAATGTAGGTATGGT
Downstream 100 bases:
>100_bases TGCTTTGAGGAGAGAGCCCCAAATGACTTGAATTGTCAGGAAGGTAGGGGATAAACCAAAGCAAAAAATAGCGCCGAAAA AGGCGCTATTTTTATTGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MRYLAVLMMGLLTFPAFALTRVNLYQAEVAVDPQQSNADAAARVRGMEEVIVRATGSQDALKNDAVQKALRQSNQYITQI STQQEGAQSVMRLQFSAQHIRSLLSQAQLPFWPESRSNLLVWLVEEANYDRSVSWEHADTPLLNQMKVRARIRGLPLTVP VGDFDDVTGVQVSDLWGGFINPISIASQRYPTDAVLVVRAQGSELRWTLFDQLANTMVSQPKAPISGQASGEQAVTEMID EISDYYARKSAVVVSSESSQSVLAQFSPLDSAQDFFVVENKLKRLSSVASLDILKVQGTQVTFNVHLLASVEEFTNEVVR MGQAVLMDMPPEEPVSADNNLLENSSLENSASEMPVDPSNPNNAAAQPQPVQPKTLYFSWQG
Sequences:
>Translated_382_residues MRYLAVLMMGLLTFPAFALTRVNLYQAEVAVDPQQSNADAAARVRGMEEVIVRATGSQDALKNDAVQKALRQSNQYITQI STQQEGAQSVMRLQFSAQHIRSLLSQAQLPFWPESRSNLLVWLVEEANYDRSVSWEHADTPLLNQMKVRARIRGLPLTVP VGDFDDVTGVQVSDLWGGFINPISIASQRYPTDAVLVVRAQGSELRWTLFDQLANTMVSQPKAPISGQASGEQAVTEMID EISDYYARKSAVVVSSESSQSVLAQFSPLDSAQDFFVVENKLKRLSSVASLDILKVQGTQVTFNVHLLASVEEFTNEVVR MGQAVLMDMPPEEPVSADNNLLENSSLENSASEMPVDPSNPNNAAAQPQPVQPKTLYFSWQG >Mature_382_residues MRYLAVLMMGLLTFPAFALTRVNLYQAEVAVDPQQSNADAAARVRGMEEVIVRATGSQDALKNDAVQKALRQSNQYITQI STQQEGAQSVMRLQFSAQHIRSLLSQAQLPFWPESRSNLLVWLVEEANYDRSVSWEHADTPLLNQMKVRARIRGLPLTVP VGDFDDVTGVQVSDLWGGFINPISIASQRYPTDAVLVVRAQGSELRWTLFDQLANTMVSQPKAPISGQASGEQAVTEMID EISDYYARKSAVVVSSESSQSVLAQFSPLDSAQDFFVVENKLKRLSSVASLDILKVQGTQVTFNVHLLASVEEFTNEVVR MGQAVLMDMPPEEPVSADNNLLENSSLENSASEMPVDPSNPNNAAAQPQPVQPKTLYFSWQG
Specific function: Unknown
COG id: COG3249
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42120; Mature: 42120
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYLAVLMMGLLTFPAFALTRVNLYQAEVAVDPQQSNADAAARVRGMEEVIVRATGSQDA CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHCHHHHHEECCCCHHH LKNDAVQKALRQSNQYITQISTQQEGAQSVMRLQFSAQHIRSLLSQAQLPFWPESRSNLL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE VWLVEEANYDRSVSWEHADTPLLNQMKVRARIRGLPLTVPVGDFDDVTGVQVSDLWGGFI EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHCCCCC NPISIASQRYPTDAVLVVRAQGSELRWTLFDQLANTMVSQPKAPISGQASGEQAVTEMID CHHHHHHCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH EISDYYARKSAVVVSSESSQSVLAQFSPLDSAQDFFVVENKLKRLSSVASLDILKVQGTQ HHHHHHHHCCEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCE VTFNVHLLASVEEFTNEVVRMGQAVLMDMPPEEPVSADNNLLENSSLENSASEMPVDPSN EEEEEEEEHHHHHHHHHHHHHCHHEEECCCCCCCCCCCCCHHCCCCCCCCHHCCCCCCCC PNNAAAQPQPVQPKTLYFSWQG CCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MRYLAVLMMGLLTFPAFALTRVNLYQAEVAVDPQQSNADAAARVRGMEEVIVRATGSQDA CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHCHHHHHEECCCCHHH LKNDAVQKALRQSNQYITQISTQQEGAQSVMRLQFSAQHIRSLLSQAQLPFWPESRSNLL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE VWLVEEANYDRSVSWEHADTPLLNQMKVRARIRGLPLTVPVGDFDDVTGVQVSDLWGGFI EEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHCCCCC NPISIASQRYPTDAVLVVRAQGSELRWTLFDQLANTMVSQPKAPISGQASGEQAVTEMID CHHHHHHCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH EISDYYARKSAVVVSSESSQSVLAQFSPLDSAQDFFVVENKLKRLSSVASLDILKVQGTQ HHHHHHHHCCEEEEECCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCE VTFNVHLLASVEEFTNEVVRMGQAVLMDMPPEEPVSADNNLLENSSLENSASEMPVDPSN EEEEEEEEHHHHHHHHHHHHHCHHEEECCCCCCCCCCCCCHHCCCCCCCCHHCCCCCCCC PNNAAAQPQPVQPKTLYFSWQG CCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA