| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
Click here to switch to the map view.
The map label for this gene is 147673821
Identifier: 147673821
GI number: 147673821
Start: 640120
End: 640704
Strand: Direct
Name: 147673821
Synonym: VC0395_A0602
Alternate gene names: NA
Gene position: 640120-640704 (Clockwise)
Preceding gene: 147674579
Following gene: 147673721
Centisome position: 21.17
GC content: 44.27
Gene sequence:
>585_bases ATGAGCATTGTACTTTCCGCAGATCACAAAGACGCATTGCAGGAATTCATGAACATCTCTATGGGTCGAGCCGCCAGTAA GCTTGCGACCTTGCTTAATTTGCACGTCACCATCTCCGTTCCCAACATTCGGGTCGCGACAGAGGAAGATATGCGTGCGC TGCAGTCTTATGCCGCTGATTATTATTACACCCGACAATCTTTCTACGGCGGAATGGATGGAGAGCTGATCACCTTAATG AGCCGTTGCGGTTGTGAGCAAGTGGTCAATGACCTTAACCATTCGAAAGGTATGGCGGATGGATTAGTCAGTATTGAAGA GAGCATTTTGGATATCTCCAACATCCTTTCTGGGGCGAGTTTAAAAGGTCTATGTCAACAGATTGAATTGAAAACCAAAA TTCAACCACCAGTCATCTTTGATCCGACCCATCAGCCTTTGCCAATTTTGCAATGGCGTCTGTCTTTGATTATGGAAATC AATTTTCTGGTTGAGAAGGCCTCTTTTTCTGCCAAAACCATCATCTGTTTTGCTGATAAAGAGTTAGATAAGGTATTTGC CCATCTCGACGAACTCTTGATGTAA
Upstream 100 bases:
>100_bases TGGTTCAGCAACGAGTTCGAGAGTTGGGCGCGCTGAACTTTTTGCAAAAGCCACTCGATCCAGCGCAACTGGAACAAACA CTTCATGAGGCAGGGTTGCT
Downstream 100 bases:
>100_bases GGATACGAGTATGGCAAAGAGTCGTTTATTGCTCTCTGAACTACTGGATCAACTCTCTTTTGCGCTCTGTATCGTGCGTA ATGACTATGTGATCGTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Response Regulator; Chemotaxis Protein; Chemotaxis Protein CheC Inhibitor Of MCP Methylation; MCP Methylation Inhibitor CheC; CheC Family Protein
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSIVLSADHKDALQEFMNISMGRAASKLATLLNLHVTISVPNIRVATEEDMRALQSYAADYYYTRQSFYGGMDGELITLM SRCGCEQVVNDLNHSKGMADGLVSIEESILDISNILSGASLKGLCQQIELKTKIQPPVIFDPTHQPLPILQWRLSLIMEI NFLVEKASFSAKTIICFADKELDKVFAHLDELLM
Sequences:
>Translated_194_residues MSIVLSADHKDALQEFMNISMGRAASKLATLLNLHVTISVPNIRVATEEDMRALQSYAADYYYTRQSFYGGMDGELITLM SRCGCEQVVNDLNHSKGMADGLVSIEESILDISNILSGASLKGLCQQIELKTKIQPPVIFDPTHQPLPILQWRLSLIMEI NFLVEKASFSAKTIICFADKELDKVFAHLDELLM >Mature_193_residues SIVLSADHKDALQEFMNISMGRAASKLATLLNLHVTISVPNIRVATEEDMRALQSYAADYYYTRQSFYGGMDGELITLMS RCGCEQVVNDLNHSKGMADGLVSIEESILDISNILSGASLKGLCQQIELKTKIQPPVIFDPTHQPLPILQWRLSLIMEIN FLVEKASFSAKTIICFADKELDKVFAHLDELLM
Specific function: Unknown
COG id: COG1776
COG function: function code NT; Chemotaxis protein CheC, inhibitor of MCP methylation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21626; Mature: 21495
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVLSADHKDALQEFMNISMGRAASKLATLLNLHVTISVPNIRVATEEDMRALQSYAAD CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEECHHHHHHHHHHHHH YYYTRQSFYGGMDGELITLMSRCGCEQVVNDLNHSKGMADGLVSIEESILDISNILSGAS HHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH LKGLCQQIELKTKIQPPVIFDPTHQPLPILQWRLSLIMEINFLVEKASFSAKTIICFADK HHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCH ELDKVFAHLDELLM HHHHHHHHHHHHCC >Mature Secondary Structure SIVLSADHKDALQEFMNISMGRAASKLATLLNLHVTISVPNIRVATEEDMRALQSYAAD EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEECHHHHHHHHHHHHH YYYTRQSFYGGMDGELITLMSRCGCEQVVNDLNHSKGMADGLVSIEESILDISNILSGAS HHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH LKGLCQQIELKTKIQPPVIFDPTHQPLPILQWRLSLIMEINFLVEKASFSAKTIICFADK HHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCH ELDKVFAHLDELLM HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA