| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673819
Identifier: 147673819
GI number: 147673819
Start: 636232
End: 636720
Strand: Reverse
Name: 147673819
Synonym: VC0395_A0596
Alternate gene names: NA
Gene position: 636720-636232 (Counterclockwise)
Preceding gene: 147673107
Following gene: 147674172
Centisome position: 21.06
GC content: 45.4
Gene sequence:
>489_bases ATGTCTGATGTTTCTACCACCGTCGATTTTGCCACACAAACCGTACAACCTGTAGTTGAGTCAAGCGGCTCCATTTGGGG TTATGTGGTCGGCGGGATCGTCATCGTGATTGCTGCGGGTTATTTTGGTTTTAGAAAAATTAACAAACCTGCGTTTATGA TCAAGCAACTGCGTAAACGTAACCAAAAAGAGATGAAAAAGAATGGCGTGGAAAGTGCCGAAGCCATGAACGACCTCGAT CTTGTGCTGGATGCCGTTGAAGCGTACGCCACTGAGAAAAAAATGAAAGGCACGGAAATGGTGAAATTGCTTGCGCCACT CAATGACGCCACCAAGATTAAATCTGCCAGCGATTTCTATCATGCGATGTCTTACATCGCCAAAAGCATTGATAACCAAA CGTTAGCGAAAAATCTGCTCAACAAATCTAAGCAAGTGAAATCGAGCTCAGCGTTGATGGCAGGCCTTCTAAAGCGCGCG GGCATTTAA
Upstream 100 bases:
>100_bases TCGCCCTTTCAATAAAGATTGATGCACCGCAATGCGCCGACTCGGCAGCCAGATTAATTAATAGCTTCTGTTTCGAAGCG CCACCGATAGGATTTGTAAG
Downstream 100 bases:
>100_bases TCTCGGTAATCCAATCCATAGTTCAAGAGCCACCTAAGGTGGCTCTTTTTATTTTTCCGGCTTATCCGTAATGGTTTGTA AATACTGATAAGGCGTAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MSDVSTTVDFATQTVQPVVESSGSIWGYVVGGIVIVIAAGYFGFRKINKPAFMIKQLRKRNQKEMKKNGVESAEAMNDLD LVLDAVEAYATEKKMKGTEMVKLLAPLNDATKIKSASDFYHAMSYIAKSIDNQTLAKNLLNKSKQVKSSSALMAGLLKRA GI
Sequences:
>Translated_162_residues MSDVSTTVDFATQTVQPVVESSGSIWGYVVGGIVIVIAAGYFGFRKINKPAFMIKQLRKRNQKEMKKNGVESAEAMNDLD LVLDAVEAYATEKKMKGTEMVKLLAPLNDATKIKSASDFYHAMSYIAKSIDNQTLAKNLLNKSKQVKSSSALMAGLLKRA GI >Mature_161_residues SDVSTTVDFATQTVQPVVESSGSIWGYVVGGIVIVIAAGYFGFRKINKPAFMIKQLRKRNQKEMKKNGVESAEAMNDLDL VLDAVEAYATEKKMKGTEMVKLLAPLNDATKIKSASDFYHAMSYIAKSIDNQTLAKNLLNKSKQVKSSSALMAGLLKRAG I
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17669; Mature: 17538
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVSTTVDFATQTVQPVVESSGSIWGYVVGGIVIVIAAGYFGFRKINKPAFMIKQLRKR CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH NQKEMKKNGVESAEAMNDLDLVLDAVEAYATEKKMKGTEMVKLLAPLNDATKIKSASDFY HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH HAMSYIAKSIDNQTLAKNLLNKSKQVKSSSALMAGLLKRAGI HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDVSTTVDFATQTVQPVVESSGSIWGYVVGGIVIVIAAGYFGFRKINKPAFMIKQLRKR CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH NQKEMKKNGVESAEAMNDLDLVLDAVEAYATEKKMKGTEMVKLLAPLNDATKIKSASDFY HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH HAMSYIAKSIDNQTLAKNLLNKSKQVKSSSALMAGLLKRAGI HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA