| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673785
Identifier: 147673785
GI number: 147673785
Start: 833887
End: 834612
Strand: Reverse
Name: 147673785
Synonym: VC0395_A0821
Alternate gene names: NA
Gene position: 834612-833887 (Counterclockwise)
Preceding gene: 147674751
Following gene: 147674612
Centisome position: 27.6
GC content: 47.93
Gene sequence:
>726_bases ATGTTCCTGACTGCATACCATTCAAATCAACAGCACCAATTTCAATTTACTCGCCAACAGGCTAGCCACTTTGCCAAATT GGTCGCGGGTGATTTCAACCCCATCCATGACGAAGATAGTAAACGTTTCTGCGTACCGGGCGATCTGCTGTTTGCTGTAT TGCTGCAAAAAGAAGGCATTAGCCAAAAGATGCGTTTTGATTTCTCTGGCATGGTGAGTGATGGCGTTGCTCTGCACATT GAAAATAAGTGTCAGCGTGAAAGCGCAGTCGTGGATGCCAGCGGCAAAGAGTATCTGCACATGTCACGTGAAGGTGAAGT CAACCGCAACCCTGCTTTTATTGAGCATGTGGTGACCAGCTATGTGCAGTTTTCTGGCATGAACTTCCCGCACATCATGG TGCCGTTGATGGAAGAGCAGCAGATGATGATCAACTGCCAGCGTCCACTGGTGATTTATGAATCGATGGAAGTGGAATTT ACCCGCCTTGATCTCACCCATCCAGAAGTAGAGTTTGCGGGCGCGACCTTTGATGTGGATGGCAAACGCGGCTTAGTGAC ACTCAACTTCGTGTTTAAAGATGAAGGACAAGTGGTCGGTAAAGGCCTAAAACGTATGGTTGCCAGCGGTTTAAAACCTT ACGACCAAGCGGAAATCGATGATCTCGTCAACCGTTTCAATGAGCGCAAAGAAGCCTTCCTTAGCCAGATTGAGCAAGCG GCATAA
Upstream 100 bases:
>100_bases AAATCACTTGAAGTGGTAAAAGAACATCTCCACTGGATAGACCAATGATTGTAAGATTCTGTCCTATAATGCGCGCAGTT TAGTTGAGATAGCGATAACC
Downstream 100 bases:
>100_bases TTCGTAGAGCATCTAAATCTAATGCAAAAAAATAACCCGCGGATAGCGGGTTATTTTTTATCTCGGATAGGTAATCAAGC GGTTTTCCGTCTCATCCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MFLTAYHSNQQHQFQFTRQQASHFAKLVAGDFNPIHDEDSKRFCVPGDLLFAVLLQKEGISQKMRFDFSGMVSDGVALHI ENKCQRESAVVDASGKEYLHMSREGEVNRNPAFIEHVVTSYVQFSGMNFPHIMVPLMEEQQMMINCQRPLVIYESMEVEF TRLDLTHPEVEFAGATFDVDGKRGLVTLNFVFKDEGQVVGKGLKRMVASGLKPYDQAEIDDLVNRFNERKEAFLSQIEQA A
Sequences:
>Translated_241_residues MFLTAYHSNQQHQFQFTRQQASHFAKLVAGDFNPIHDEDSKRFCVPGDLLFAVLLQKEGISQKMRFDFSGMVSDGVALHI ENKCQRESAVVDASGKEYLHMSREGEVNRNPAFIEHVVTSYVQFSGMNFPHIMVPLMEEQQMMINCQRPLVIYESMEVEF TRLDLTHPEVEFAGATFDVDGKRGLVTLNFVFKDEGQVVGKGLKRMVASGLKPYDQAEIDDLVNRFNERKEAFLSQIEQA A >Mature_241_residues MFLTAYHSNQQHQFQFTRQQASHFAKLVAGDFNPIHDEDSKRFCVPGDLLFAVLLQKEGISQKMRFDFSGMVSDGVALHI ENKCQRESAVVDASGKEYLHMSREGEVNRNPAFIEHVVTSYVQFSGMNFPHIMVPLMEEQQMMINCQRPLVIYESMEVEF TRLDLTHPEVEFAGATFDVDGKRGLVTLNFVFKDEGQVVGKGLKRMVASGLKPYDQAEIDDLVNRFNERKEAFLSQIEQA A
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27476; Mature: 27476
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLTAYHSNQQHQFQFTRQQASHFAKLVAGDFNPIHDEDSKRFCVPGDLLFAVLLQKEGI CEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHCCC SQKMRFDFSGMVSDGVALHIENKCQRESAVVDASGKEYLHMSREGEVNRNPAFIEHVVTS CHHHHCCCCCCCCCCEEEEECCHHHHHHEEECCCCCCEEEECCCCCCCCCHHHHHHHHHH YVQFSGMNFPHIMVPLMEEQQMMINCQRPLVIYESMEVEFTRLDLTHPEVEFAGATFDVD HHHHCCCCCCEEEEEHHHCCHHHEECCCCEEEEECCCEEEEEEECCCCCEEECCCEEEEC GKRGLVTLNFVFKDEGQVVGKGLKRMVASGLKPYDQAEIDDLVNRFNERKEAFLSQIEQA CCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC A C >Mature Secondary Structure MFLTAYHSNQQHQFQFTRQQASHFAKLVAGDFNPIHDEDSKRFCVPGDLLFAVLLQKEGI CEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHHCCC SQKMRFDFSGMVSDGVALHIENKCQRESAVVDASGKEYLHMSREGEVNRNPAFIEHVVTS CHHHHCCCCCCCCCCEEEEECCHHHHHHEEECCCCCCEEEECCCCCCCCCHHHHHHHHHH YVQFSGMNFPHIMVPLMEEQQMMINCQRPLVIYESMEVEFTRLDLTHPEVEFAGATFDVD HHHHCCCCCCEEEEEHHHCCHHHEECCCCEEEEECCCEEEEEEECCCCCEEECCCEEEEC GKRGLVTLNFVFKDEGQVVGKGLKRMVASGLKPYDQAEIDDLVNRFNERKEAFLSQIEQA CCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA