| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673775
Identifier: 147673775
GI number: 147673775
Start: 1666819
End: 1667316
Strand: Reverse
Name: 147673775
Synonym: VC0395_A1549
Alternate gene names: NA
Gene position: 1667316-1666819 (Counterclockwise)
Preceding gene: 147674189
Following gene: 147674473
Centisome position: 55.13
GC content: 45.98
Gene sequence:
>498_bases TTGTTGGTATCCAAGGTTAAAAAACAGACCAACGCCCAATTTAGTCATTGTATTCAACACCCAGCGAAAGCTGGGTGTTT TTTATCACGAAAATCCGAAGCCTGCCTCAACTGCAATCTGCCGATTTTTGGGTATATACTGGTCGCCTTCAATATGGCAC AAAAGGAAAGTGACGTGGCGCAATTCAAACATCAACAACTCAGCCAAGCCGAGCAAGATAAACTCGATGCCGCAGTGTTT CGTCAACTGCTACAACATCTTGATCAACATAAAGAAGTTCAGAACATCGACCTGATGATTTTGGCGGATTTTTGCCGCAA CTGCTTGTGTAAATGGTACGCTGCTGAAGCGGAAAAACAGGGGTTGGATTTGAATATTGATGATGCGCGTGAGCGCGTTT ACGGTATGACTTACGATGAGTGGAAGGCAAACCACCAGCCGCCTGCGACGCCAGAGCAACTCGCCGCCTTTGAAGCGAAA ACGAAAAGCAAAGCTTAA
Upstream 100 bases:
>100_bases AGCGGTCGTTATCGTGACGCTGTCGAAGGTATTGAAGAAAACATCGAGGACGTATGGCACTTAGAACGTGATCTGACAGT CCCCAATGCTCCTTGGTTGA
Downstream 100 bases:
>100_bases ATGTAGGCAATAAAAAACGCGCCCAATGGATGGCGCGTTTTTCGTAAACCGTATAAGCGGCTCGGTTTATTGCTTGCTTA GCACGTAAAACTCAGCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MLVSKVKKQTNAQFSHCIQHPAKAGCFLSRKSEACLNCNLPIFGYILVAFNMAQKESDVAQFKHQQLSQAEQDKLDAAVF RQLLQHLDQHKEVQNIDLMILADFCRNCLCKWYAAEAEKQGLDLNIDDARERVYGMTYDEWKANHQPPATPEQLAAFEAK TKSKA
Sequences:
>Translated_165_residues MLVSKVKKQTNAQFSHCIQHPAKAGCFLSRKSEACLNCNLPIFGYILVAFNMAQKESDVAQFKHQQLSQAEQDKLDAAVF RQLLQHLDQHKEVQNIDLMILADFCRNCLCKWYAAEAEKQGLDLNIDDARERVYGMTYDEWKANHQPPATPEQLAAFEAK TKSKA >Mature_165_residues MLVSKVKKQTNAQFSHCIQHPAKAGCFLSRKSEACLNCNLPIFGYILVAFNMAQKESDVAQFKHQQLSQAEQDKLDAAVF RQLLQHLDQHKEVQNIDLMILADFCRNCLCKWYAAEAEKQGLDLNIDDARERVYGMTYDEWKANHQPPATPEQLAAFEAK TKSKA
Specific function: Unknown
COG id: COG3492
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18803; Mature: 18803
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVSKVKKQTNAQFSHCIQHPAKAGCFLSRKSEACLNCNLPIFGYILVAFNMAQKESDVA CCHHHHHHHHHHHHHHHHHCHHHHCHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHH QFKHQQLSQAEQDKLDAAVFRQLLQHLDQHKEVQNIDLMILADFCRNCLCKWYAAEAEKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC GLDLNIDDARERVYGMTYDEWKANHQPPATPEQLAAFEAKTKSKA CCCCCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MLVSKVKKQTNAQFSHCIQHPAKAGCFLSRKSEACLNCNLPIFGYILVAFNMAQKESDVA CCHHHHHHHHHHHHHHHHHCHHHHCHHHCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHH QFKHQQLSQAEQDKLDAAVFRQLLQHLDQHKEVQNIDLMILADFCRNCLCKWYAAEAEKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC GLDLNIDDARERVYGMTYDEWKANHQPPATPEQLAAFEAKTKSKA CCCCCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA