| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673753
Identifier: 147673753
GI number: 147673753
Start: 365436
End: 365654
Strand: Reverse
Name: 147673753
Synonym: VC0395_A0343
Alternate gene names: NA
Gene position: 365654-365436 (Counterclockwise)
Preceding gene: 147675066
Following gene: 147673172
Centisome position: 12.09
GC content: 43.84
Gene sequence:
>219_bases ATGCCGAAACCTCGCTACAAAACAACGAATTGGAAACAGTACAACAAAGCCTTAATCAACCGTGGTTCACTCACTTTCTG GATTGATGAAGAAGCCACTCGCCAGTGGAAGCAGAGCAAACAAGATAAACGAGGTAGACCTCGCCAGTTCAGCGACTTAG CCATTATTACTGCGCTTATGGTGAAACGAGTTTTCTCAATGCAGTTTAGAGCATTGTAA
Upstream 100 bases:
>100_bases AAAATAATGCCACCGTGGGCAGGCTTTGTTGCGTAATTCGAGGGAACTAAATCCGAAGGTTACGATCTGATCCGTTAAGT AAGTTAATTCCCCTAGTCTC
Downstream 100 bases:
>100_bases GGGTTTATCGATTCTGTTTTTTCATTGGCTAACGTCCCTATAGTCTGCCCACATTACAGTTGTATCAGTCGAAGAGCTAA GCAAGTCGAGGTTTCATTTA
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALMVKRVFSMQFRAL
Sequences:
>Translated_72_residues MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALMVKRVFSMQFRAL >Mature_71_residues PKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALMVKRVFSMQFRAL
Specific function: Required for transposition of transposon Tn903 [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002559 [H]
Pfam domain/function: PF01609 Transposase_11 [H]
EC number: NA
Molecular weight: Translated: 8706; Mature: 8575
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALM CCCCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VKRVFSMQFRAL HHHHHHHHHHCC >Mature Secondary Structure PKPRYKTTNWKQYNKALINRGSLTFWIDEEATRQWKQSKQDKRGRPRQFSDLAIITALM CCCCCCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH VKRVFSMQFRAL HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6270337; 6261245; 6271455 [H]