| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673750
Identifier: 147673750
GI number: 147673750
Start: 750282
End: 750830
Strand: Reverse
Name: 147673750
Synonym: VC0395_A0724
Alternate gene names: NA
Gene position: 750830-750282 (Counterclockwise)
Preceding gene: 147673334
Following gene: 147675342
Centisome position: 24.83
GC content: 50.64
Gene sequence:
>549_bases ATGCGTAAAACAATCGTTGCAACTGCACTACTTCTCGTCGCTGGCTCGGCACTGGCTGAAGGTGAGCGTGATAGCCGTAC CGTAATGAGCAACTTTAGCTATGACTATGTAGAAGCGCGCATCGGCACCAGCCCTATGACTTTTGGTGCTGCGATGAGCC GCTCTGTTCACCCTAATGCTCATGTGATTGGTCGAATCGACTCAGAATTTGAAAGTGACTACGATGTCGCGGCCGGATTT GGATTCCACGCGCCGGTCAATAACTGGGCAGATCTTACCGGTGAAATGCTGTTTCGTTTAGTCGATGATCGCAAACGCTC TAGCGCCGATACCGGCATGGAACTGAACATTGGTATTCGTCAGTGGTTAGGGCCTCAGCTTGAGGTGGGCGGTAAAGCAG GTTACGTCTCTATCGACAACAATGATGATTGGCTAGGCTCAGTATACGCACGCTTCCACGCAACCGAGCTGTTCTCTCTC GGTGCAGAAGCTCGCATAAACGACTTTTACGACGATCAGTTGATGTTCACAGCTCGCTTTAACTTCTGA
Upstream 100 bases:
>100_bases TGTCAAACCATGAACCCGGAGTCGATTTTAAGGCTTCAGTCACTGCAACTTTCAGGTAGTGGCCTTGGAATTAATCAGAA GATAAAGGTTTATCTTAATT
Downstream 100 bases:
>100_bases TCCGTTAGGGTTCGTCGCGATACAGTAAAAAAGCCATAAGCCAGAAATCTGGCTTATGGCTTTTTTATGATTGAGAACGT GGCTAACGCTTTAACTTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MRKTIVATALLLVAGSALAEGERDSRTVMSNFSYDYVEARIGTSPMTFGAAMSRSVHPNAHVIGRIDSEFESDYDVAAGF GFHAPVNNWADLTGEMLFRLVDDRKRSSADTGMELNIGIRQWLGPQLEVGGKAGYVSIDNNDDWLGSVYARFHATELFSL GAEARINDFYDDQLMFTARFNF
Sequences:
>Translated_182_residues MRKTIVATALLLVAGSALAEGERDSRTVMSNFSYDYVEARIGTSPMTFGAAMSRSVHPNAHVIGRIDSEFESDYDVAAGF GFHAPVNNWADLTGEMLFRLVDDRKRSSADTGMELNIGIRQWLGPQLEVGGKAGYVSIDNNDDWLGSVYARFHATELFSL GAEARINDFYDDQLMFTARFNF >Mature_182_residues MRKTIVATALLLVAGSALAEGERDSRTVMSNFSYDYVEARIGTSPMTFGAAMSRSVHPNAHVIGRIDSEFESDYDVAAGF GFHAPVNNWADLTGEMLFRLVDDRKRSSADTGMELNIGIRQWLGPQLEVGGKAGYVSIDNNDDWLGSVYARFHATELFSL GAEARINDFYDDQLMFTARFNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20164; Mature: 20164
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTIVATALLLVAGSALAEGERDSRTVMSNFSYDYVEARIGTSPMTFGAAMSRSVHPNA CCHHHHHHHHHHHHCHHHHCCCCCCHHHHHCCCCHHHEEECCCCCCHHHHHHCCCCCCCC HVIGRIDSEFESDYDVAAGFGFHAPVNNWADLTGEMLFRLVDDRKRSSADTGMELNIGIR EEEECCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHH QWLGPQLEVGGKAGYVSIDNNDDWLGSVYARFHATELFSLGAEARINDFYDDQLMFTARF HHCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEC NF CC >Mature Secondary Structure MRKTIVATALLLVAGSALAEGERDSRTVMSNFSYDYVEARIGTSPMTFGAAMSRSVHPNA CCHHHHHHHHHHHHCHHHHCCCCCCHHHHHCCCCHHHEEECCCCCCHHHHHHCCCCCCCC HVIGRIDSEFESDYDVAAGFGFHAPVNNWADLTGEMLFRLVDDRKRSSADTGMELNIGIR EEEECCCCCCCCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHH QWLGPQLEVGGKAGYVSIDNNDDWLGSVYARFHATELFSLGAEARINDFYDDQLMFTARF HHCCCCEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEC NF CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA