| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is pgsA [H]
Identifier: 147673568
GI number: 147673568
Start: 851569
End: 852126
Strand: Direct
Name: pgsA [H]
Synonym: VC0395_A0835
Alternate gene names: 147673568
Gene position: 851569-852126 (Clockwise)
Preceding gene: 147674383
Following gene: 147674755
Centisome position: 28.16
GC content: 47.31
Gene sequence:
>558_bases ATGCGTTTCAACATTCCTAACCTTCTCTCCTTGCTCAGATTATTTCTGATCCCCGTGTTTGTGGTGACCTTTTATCTCCC TTTTGAATGGGCTCCCTTTGTCGCCGCTATGGTGTTTTGGGTGGCTGGATTCACTGATTGGTTAGATGGAATGTTGGCGC GAAAATTAGGCCAAACCTCGCGTTTTGGTGCATTTATTGACCCAGTAGCGGATAAAGTACTGGTTGCCACGGCGCTGATT TTGATCACCGAACATTACCACAGTATCTGGATCACCATTCCTGCGGTGACCATGATCGCTCGCGAAATCATCATTTCAGC ACTGCGTGAGTGGATGGCAGAAATTGGCAAACGAGCCAGTGTCGCAGTGTCATGGGTTGGCAAAGTAAAAACTCTGACTC AAATGTTTGCGCTGTGGGTACTGATCTGGCGTTATGACGACTGGATGATTTGGCTTGGCTACATTTCTATCTATGTGGCG ACTGTGCTGACCTATTGGTCAATGGTGCAATATTTGGCGGCGGCCAAAGACGACTTACTGAATGAAGAACATCACTAG
Upstream 100 bases:
>100_bases CGGGCATCAGCCACGCATTGGCAGAAAACATTTATCAAGCATTGAAACAATAAGAAAAATACAGCAACATTAACGCGCCA TCGAAAAGAGCCTATACATT
Downstream 100 bases:
>100_bases AAAACGGGCGAAAGCCCGTTTTTTTATCGTTGCGCGATAGGCGAGTAAAACAAAAAAGTGAAGCTTGGGATCCAGTTATC TCTATAAATATACGGTGTTT
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MRFNIPNLLSLLRLFLIPVFVVTFYLPFEWAPFVAAMVFWVAGFTDWLDGMLARKLGQTSRFGAFIDPVADKVLVATALI LITEHYHSIWITIPAVTMIAREIIISALREWMAEIGKRASVAVSWVGKVKTLTQMFALWVLIWRYDDWMIWLGYISIYVA TVLTYWSMVQYLAAAKDDLLNEEHH
Sequences:
>Translated_185_residues MRFNIPNLLSLLRLFLIPVFVVTFYLPFEWAPFVAAMVFWVAGFTDWLDGMLARKLGQTSRFGAFIDPVADKVLVATALI LITEHYHSIWITIPAVTMIAREIIISALREWMAEIGKRASVAVSWVGKVKTLTQMFALWVLIWRYDDWMIWLGYISIYVA TVLTYWSMVQYLAAAKDDLLNEEHH >Mature_185_residues MRFNIPNLLSLLRLFLIPVFVVTFYLPFEWAPFVAAMVFWVAGFTDWLDGMLARKLGQTSRFGAFIDPVADKVLVATALI LITEHYHSIWITIPAVTMIAREIIISALREWMAEIGKRASVAVSWVGKVKTLTQMFALWVLIWRYDDWMIWLGYISIYVA TVLTYWSMVQYLAAAKDDLLNEEHH
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=182, Percent_Identity=65.3846153846154, Blast_Score=245, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 21406; Mature: 21406
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFNIPNLLSLLRLFLIPVFVVTFYLPFEWAPFVAAMVFWVAGFTDWLDGMLARKLGQTS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RFGAFIDPVADKVLVATALILITEHYHSIWITIPAVTMIAREIIISALREWMAEIGKRAS HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VAVSWVGKVKTLTQMFALWVLIWRYDDWMIWLGYISIYVATVLTYWSMVQYLAAAKDDLL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NEEHH CCCCC >Mature Secondary Structure MRFNIPNLLSLLRLFLIPVFVVTFYLPFEWAPFVAAMVFWVAGFTDWLDGMLARKLGQTS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RFGAFIDPVADKVLVATALILITEHYHSIWITIPAVTMIAREIIISALREWMAEIGKRAS HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH VAVSWVGKVKTLTQMFALWVLIWRYDDWMIWLGYISIYVATVLTYWSMVQYLAAAKDDLL HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NEEHH CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]