| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is glmM [H]
Identifier: 147673470
GI number: 147673470
Start: 133600
End: 135012
Strand: Reverse
Name: glmM [H]
Synonym: VC0395_A0140
Alternate gene names: 147673470
Gene position: 135012-133600 (Counterclockwise)
Preceding gene: 147673254
Following gene: 147675081
Centisome position: 4.46
GC content: 49.47
Gene sequence:
>1413_bases ATGATTAAATTTGGTACTGGCGGCTGGCGTGCGTTTATTGGTGAAGAATTCACTAAAGATAATGTGCGCTTGGTGGCTCA AGCGTTAGCCAACATCATCCATCATGAGCAAGCCGCAAACGAAGGCTTCGTAATTGGTTACGACCGCCGTTTTCTGTCAG ACAAAGCGGGACGCTGGTTTGCCGAAGTGTTAGCCGCGAATGGCGTTGTGGTGAGCTTTATCGACAAGTTTGTGCCAACA CCGGTGGTGATGTTTAAAGCCAAAGCGATGGATTGTGCTTATTCAGCCTGTATTACCGCCTCGCACAACCCGGCCGACTA CAACGGCATCAAAGTGTTTATCCGTGGTGGCCGTGATGCAGATGAAGTGATCACTCAGAAGATCGAGCAGCAAATTGCCA CACTGACTTTACAAGACGTGAAATCGATCGACTTTGATCAAGCCGTCAACGACAAACTGATCGCCATCATCAACCCGATG AACGAGTTCGTCGACAGCATCATCAACTTCATCGATATTGAAGCGATCAAAAAAGCCAATCTACGAGTGTTGATCGACCC TATGTTCGGGGTGGCGAAAAACGCGCTGCAAACGGTACTGATCAATGGCCGCTGCGACGTGGACGTGATCAACGATGGCA AAAACCCTGATTTCGGTGGTTTGATGCCTTCGCCTAGCGCTGCCACCTTGTATCGCTTGAAGCATCTGGTGAAACACGAA GGTTATGACATCGGTATCGGCACCGATGGCGATGCGGACCGCCTTGGCATCATCGATGAAAAAGGCAACTTTATTCACCC GAACGAAGTGCTGATCCTGCTTTACTACTACCTGCTGGAGTACAAAGGCTGGAAAGGTTCTGTGGTGCGTAACATCGCAA CCACACATCTGTTGGATAAGATCGCCGCCGATCATGGTGAGCGGTGCTTTGAAGTGCCTGTGGGCTTTAAACACATCTCT TCACAAATGGAAGCGGACGACTCTCTGATTGGCGGGGAGAGCTCTGGCGGCCTCACGATTCGTGGTCACATCAAGGGGAA AGATGGCGTGTTCGCTTCTAGCCTATTGGTGGAAATGATCAGCGTGACGGGCAAGAAACTCTCTGAGCTGTTAACCGAGA TCTATGATCGTTACGGCTATGCCTACACTGCGGAAGGCGATTGCAAATTTAAGCCCGCCCAGCGTGATGAGATCTACAAC AAGGCCTACATTGAGAAAAAACTGCCTGAGTTTGAATTCGACATCGATAAAGTCAGCTATGAAGATGGGGCGAAAGTCTA CTTCAAGAACGGTGGCTGGGTAATTGCCCGCTTCTCCGGTACTGAACCTTTATTACGTATTTTCGCCGAAATGGCCGACA AAGATACTGCGGAGCGTGTTCTTCAACAGATGAAAGCTTTCTTGGCGTTGTAA
Upstream 100 bases:
>100_bases GTGCCCGTTTGCTAATACCTAAGCGTTTTATATGCCCAGACCACTTGTCGTTGCAGCCAACACTCTTGCAGCGTCAGTAG AAAAGGGATAGGGGGAGAAA
Downstream 100 bases:
>100_bases TCATCGCCTTGTCAAATCATCCCCTGAGGTTAAGTCCCCTCAGCGGAGAAGAACACTTGCCCGACGCTCGACGTCGGGCT TTTTTATGCGGGTAACATAG
Product: putative phosphoglucomutase/phosphomannomutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MIKFGTGGWRAFIGEEFTKDNVRLVAQALANIIHHEQAANEGFVIGYDRRFLSDKAGRWFAEVLAANGVVVSFIDKFVPT PVVMFKAKAMDCAYSACITASHNPADYNGIKVFIRGGRDADEVITQKIEQQIATLTLQDVKSIDFDQAVNDKLIAIINPM NEFVDSIINFIDIEAIKKANLRVLIDPMFGVAKNALQTVLINGRCDVDVINDGKNPDFGGLMPSPSAATLYRLKHLVKHE GYDIGIGTDGDADRLGIIDEKGNFIHPNEVLILLYYYLLEYKGWKGSVVRNIATTHLLDKIAADHGERCFEVPVGFKHIS SQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMISVTGKKLSELLTEIYDRYGYAYTAEGDCKFKPAQRDEIYN KAYIEKKLPEFEFDIDKVSYEDGAKVYFKNGGWVIARFSGTEPLLRIFAEMADKDTAERVLQQMKAFLAL
Sequences:
>Translated_470_residues MIKFGTGGWRAFIGEEFTKDNVRLVAQALANIIHHEQAANEGFVIGYDRRFLSDKAGRWFAEVLAANGVVVSFIDKFVPT PVVMFKAKAMDCAYSACITASHNPADYNGIKVFIRGGRDADEVITQKIEQQIATLTLQDVKSIDFDQAVNDKLIAIINPM NEFVDSIINFIDIEAIKKANLRVLIDPMFGVAKNALQTVLINGRCDVDVINDGKNPDFGGLMPSPSAATLYRLKHLVKHE GYDIGIGTDGDADRLGIIDEKGNFIHPNEVLILLYYYLLEYKGWKGSVVRNIATTHLLDKIAADHGERCFEVPVGFKHIS SQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMISVTGKKLSELLTEIYDRYGYAYTAEGDCKFKPAQRDEIYN KAYIEKKLPEFEFDIDKVSYEDGAKVYFKNGGWVIARFSGTEPLLRIFAEMADKDTAERVLQQMKAFLAL >Mature_470_residues MIKFGTGGWRAFIGEEFTKDNVRLVAQALANIIHHEQAANEGFVIGYDRRFLSDKAGRWFAEVLAANGVVVSFIDKFVPT PVVMFKAKAMDCAYSACITASHNPADYNGIKVFIRGGRDADEVITQKIEQQIATLTLQDVKSIDFDQAVNDKLIAIINPM NEFVDSIINFIDIEAIKKANLRVLIDPMFGVAKNALQTVLINGRCDVDVINDGKNPDFGGLMPSPSAATLYRLKHLVKHE GYDIGIGTDGDADRLGIIDEKGNFIHPNEVLILLYYYLLEYKGWKGSVVRNIATTHLLDKIAADHGERCFEVPVGFKHIS SQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMISVTGKKLSELLTEIYDRYGYAYTAEGDCKFKPAQRDEIYN KAYIEKKLPEFEFDIDKVSYEDGAKVYFKNGGWVIARFSGTEPLLRIFAEMADKDTAERVLQQMKAFLAL
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI21361621, Length=499, Percent_Identity=25.0501002004008, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI290463102, Length=483, Percent_Identity=24.6376811594203, Blast_Score=118, Evalue=1e-26, Organism=Homo sapiens, GI133922562, Length=514, Percent_Identity=23.5408560311284, Blast_Score=113, Evalue=5e-25, Organism=Homo sapiens, GI31377548, Length=534, Percent_Identity=25.4681647940075, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI290463104, Length=322, Percent_Identity=25.1552795031056, Blast_Score=88, Evalue=2e-17, Organism=Escherichia coli, GI1786904, Length=496, Percent_Identity=27.4193548387097, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI1788361, Length=451, Percent_Identity=25.2771618625277, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1789566, Length=481, Percent_Identity=22.8690228690229, Blast_Score=81, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17535441, Length=502, Percent_Identity=26.2948207171315, Blast_Score=125, Evalue=6e-29, Organism=Saccharomyces cerevisiae, GI6323752, Length=504, Percent_Identity=26.1904761904762, Blast_Score=118, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6322722, Length=537, Percent_Identity=25.6983240223464, Blast_Score=108, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6323934, Length=407, Percent_Identity=24.5700245700246, Blast_Score=84, Evalue=4e-17, Organism=Drosophila melanogaster, GI17864244, Length=532, Percent_Identity=27.4436090225564, Blast_Score=139, Evalue=3e-33, Organism=Drosophila melanogaster, GI20129809, Length=525, Percent_Identity=25.3333333333333, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI24651977, Length=433, Percent_Identity=25.635103926097, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI24653722, Length=378, Percent_Identity=25.1322751322751, Blast_Score=82, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 52212; Mature: 52212
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKFGTGGWRAFIGEEFTKDNVRLVAQALANIIHHEQAANEGFVIGYDRRFLSDKAGRWF CCEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHH AEVLAANGVVVSFIDKFVPTPVVMFKAKAMDCAYSACITASHNPADYNGIKVFIRGGRDA HHHHHCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHEECCCCCCCCCCEEEEEECCCCH DEVITQKIEQQIATLTLQDVKSIDFDQAVNDKLIAIINPMNEFVDSIINFIDIEAIKKAN HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCC LRVLIDPMFGVAKNALQTVLINGRCDVDVINDGKNPDFGGLMPSPSAATLYRLKHLVKHE CEEEECCHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GYDIGIGTDGDADRLGIIDEKGNFIHPNEVLILLYYYLLEYKGWKGSVVRNIATTHLLDK CEEEECCCCCCCCCEEEEECCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH IAADHGERCFEVPVGFKHISSQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMI HHHHCCCCEEECCCCHHHHHHHHCCCCCEECCCCCCCEEEEEEECCCCCHHHHHHHHHHH SVTGKKLSELLTEIYDRYGYAYTAEGDCKFKPAQRDEIYNKAYIEKKLPEFEFDIDKVSY HHHHHHHHHHHHHHHHHCCCEEECCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCC EDGAKVYFKNGGWVIARFSGTEPLLRIFAEMADKDTAERVLQQMKAFLAL CCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MIKFGTGGWRAFIGEEFTKDNVRLVAQALANIIHHEQAANEGFVIGYDRRFLSDKAGRWF CCEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHH AEVLAANGVVVSFIDKFVPTPVVMFKAKAMDCAYSACITASHNPADYNGIKVFIRGGRDA HHHHHCCCHHHHHHHHHCCCCEEEEEHHHHHHHHHHHEECCCCCCCCCCEEEEEECCCCH DEVITQKIEQQIATLTLQDVKSIDFDQAVNDKLIAIINPMNEFVDSIINFIDIEAIKKAN HHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCC LRVLIDPMFGVAKNALQTVLINGRCDVDVINDGKNPDFGGLMPSPSAATLYRLKHLVKHE CEEEECCHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GYDIGIGTDGDADRLGIIDEKGNFIHPNEVLILLYYYLLEYKGWKGSVVRNIATTHLLDK CEEEECCCCCCCCCEEEEECCCCEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH IAADHGERCFEVPVGFKHISSQMEADDSLIGGESSGGLTIRGHIKGKDGVFASSLLVEMI HHHHCCCCEEECCCCHHHHHHHHCCCCCEECCCCCCCEEEEEEECCCCCHHHHHHHHHHH SVTGKKLSELLTEIYDRYGYAYTAEGDCKFKPAQRDEIYNKAYIEKKLPEFEFDIDKVSY HHHHHHHHHHHHHHHHHCCCEEECCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCC EDGAKVYFKNGGWVIARFSGTEPLLRIFAEMADKDTAERVLQQMKAFLAL CCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]