| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673457
Identifier: 147673457
GI number: 147673457
Start: 1213878
End: 1214636
Strand: Reverse
Name: 147673457
Synonym: VC0395_A1154
Alternate gene names: NA
Gene position: 1214636-1213878 (Counterclockwise)
Preceding gene: 147675741
Following gene: 147673075
Centisome position: 40.17
GC content: 47.83
Gene sequence:
>759_bases ATGAAAAGATGTCTCTCACTTCTTTGCGTTTCGGCACTTTTGCCAGCGCATGCCGCTTCGCTCGATCAAGCGCAAGCGAT TCAAAACAGTACTAACCAAGCTTCTGCACAGAGCCAGCAAAAAATTGACCGCAGTGCCGAGCAGAGTTTGTTACTGCGTG CGGAAATCGAACAGTTGAATGAAGAAGTCAAAAATCTTCAGGTCTACCGTAATCACTTACAATCTTTGGTTGCCAATCAA CAGCAAGAGATGGCCAGTCTTGAACAGCAAACCGAAGAGATCAAACGCACGCGCCAAGGCATAGTTCCTTTGATGTATGA CATGATTGAAGGACTGGAGGAGTGGGTTGCACAAGATAAACCGATTCGTCTTGCGGCACGTCAAGAACGCATTGAGAAAC TCAAAGAACTGATGCCTCGGGCAGATGTCAGTGATGCTGAAAAGTACCGTCGTATTCTCGAGGCATATCAGATTGAACTC GACTACGGCAATAAACTTGGCACCTATCAAGCCAAAATCACTCTCCCTTCTGCACAAGAAGTGGAAGCGGATGTGCTCTA TTTAGGTCGTCTGTCGCTATTAGCACGCAGTTTGGATGGCGAGCAGTTCTGGACTTGGAATTCCAAGCAGAACGCATGGC AAGCAATCACGGATGCCAACAAAAGCGATCTCGCTGCCGCTTACCAATTGGCTCAGCAACAGATTGCGCCGACACTGTTG AACTTGCCTGTTTCGTTAACCGCTGCGGAGGCTAAATAA
Upstream 100 bases:
>100_bases TTAAAACGGTATGAATGGAAAACAATGGTTGAACTTGGTTGATAATGAGAGCGTTTCTCAATAGAATCCCAATCATTCCT TAAACGGCTAATCACAACCC
Downstream 100 bases:
>100_bases TGACACTTAGAAAGACCACCTTAGCACTGGCATTAAGTCTGCCATTCGCCTTTGTAAGTGTTGCTAACGCTTCGAATAGC CTCGTCCAACAAGCGACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Chromosome Segregation ATPase
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKRCLSLLCVSALLPAHAASLDQAQAIQNSTNQASAQSQQKIDRSAEQSLLLRAEIEQLNEEVKNLQVYRNHLQSLVANQ QQEMASLEQQTEEIKRTRQGIVPLMYDMIEGLEEWVAQDKPIRLAARQERIEKLKELMPRADVSDAEKYRRILEAYQIEL DYGNKLGTYQAKITLPSAQEVEADVLYLGRLSLLARSLDGEQFWTWNSKQNAWQAITDANKSDLAAAYQLAQQQIAPTLL NLPVSLTAAEAK
Sequences:
>Translated_252_residues MKRCLSLLCVSALLPAHAASLDQAQAIQNSTNQASAQSQQKIDRSAEQSLLLRAEIEQLNEEVKNLQVYRNHLQSLVANQ QQEMASLEQQTEEIKRTRQGIVPLMYDMIEGLEEWVAQDKPIRLAARQERIEKLKELMPRADVSDAEKYRRILEAYQIEL DYGNKLGTYQAKITLPSAQEVEADVLYLGRLSLLARSLDGEQFWTWNSKQNAWQAITDANKSDLAAAYQLAQQQIAPTLL NLPVSLTAAEAK >Mature_252_residues MKRCLSLLCVSALLPAHAASLDQAQAIQNSTNQASAQSQQKIDRSAEQSLLLRAEIEQLNEEVKNLQVYRNHLQSLVANQ QQEMASLEQQTEEIKRTRQGIVPLMYDMIEGLEEWVAQDKPIRLAARQERIEKLKELMPRADVSDAEKYRRILEAYQIEL DYGNKLGTYQAKITLPSAQEVEADVLYLGRLSLLARSLDGEQFWTWNSKQNAWQAITDANKSDLAAAYQLAQQQIAPTLL NLPVSLTAAEAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28464; Mature: 28464
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRCLSLLCVSALLPAHAASLDQAQAIQNSTNQASAQSQQKIDRSAEQSLLLRAEIEQLN CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEVKNLQVYRNHLQSLVANQQQEMASLEQQTEEIKRTRQGIVPLMYDMIEGLEEWVAQDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC PIRLAARQERIEKLKELMPRADVSDAEKYRRILEAYQIELDYGNKLGTYQAKITLPSAQE CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHH VEADVLYLGRLSLLARSLDGEQFWTWNSKQNAWQAITDANKSDLAAAYQLAQQQIAPTLL HHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH NLPVSLTAAEAK HCCCEEECCCCC >Mature Secondary Structure MKRCLSLLCVSALLPAHAASLDQAQAIQNSTNQASAQSQQKIDRSAEQSLLLRAEIEQLN CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEVKNLQVYRNHLQSLVANQQQEMASLEQQTEEIKRTRQGIVPLMYDMIEGLEEWVAQDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCC PIRLAARQERIEKLKELMPRADVSDAEKYRRILEAYQIELDYGNKLGTYQAKITLPSAQE CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHH VEADVLYLGRLSLLARSLDGEQFWTWNSKQNAWQAITDANKSDLAAAYQLAQQQIAPTLL HHHHHHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH NLPVSLTAAEAK HCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA