| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is fieF [H]
Identifier: 147673451
GI number: 147673451
Start: 2411881
End: 2412789
Strand: Reverse
Name: fieF [H]
Synonym: VC0395_A2262
Alternate gene names: 147673451
Gene position: 2412789-2411881 (Counterclockwise)
Preceding gene: 147674434
Following gene: 147673340
Centisome position: 79.79
GC content: 51.49
Gene sequence:
>909_bases GTGATGAAAAAAGAATACGCTCGTTTGGTCACCATGGCCGCTTGGACCGCGACGGCGGTAGCCTCGCTGCTCTTGGTGGT CAAGGTTGCAGCGTGGTGGGTAACGGGGTCAGTGAGCTTACTGGCGTCTTTAATCGACTCAGTACTCGATATCGCCGCCT CTGTGGTTAACCTTATCGTATTACGTTTTGCACTACAGCCCGCTGACCATGAACATGCGTTTGGGCATGGTAAAGCAGAA TCGCTCGCGGCACTGGCACAAGCCATGTTTATTTCGGGCTCCGCGTGCTTTTTGATCCTCAACGGTGTCGACCGCTTCTT CCGACCCCATGAATTGAATGCTCCTGAATTAGGCATCTATGTCAGCGCCATCGCCATATTGGTGACTTTTGGCTTAGTAC TGTTTCAGCGCTATGTGGTCAGAAAAACCGGCAGCCAAGCGATTGCCGCAGACTCGCTCCATTATCAATCCGATCTGCTG ATGAACGCGGCCATCATGGTTGCGCTGGGATTAAGTTGGTGGGGATTGGGTCAAGCGGATGCCATTTTTGCGATCGGTAT CGGTCTCTATATCTTATTCAGCGCCTTTAAAATGGTGCATGATGCGGTGCAGACGCTGCTTGACCGTAAATTACCCGATG AAGAGTTGGAACAAATTCATGCGATCTGCCTCAGTGTGGCTGGCGTGATTGGTATGCATCAACTGCGTACGCGTATGTCC GGCCCGGTGCGCTTCATTCAGCTCCATTTGGAATTAGATGACAACATTTCGTTGCTCGAAGCACATCAGATCTCGGATCG GGTGGAGGATAAATTGCGTGAACATTTTGTGGGGGCTGATGTTTTGATCCACCAAGACCCGCATTCCGTGGTGCTTGAGG CCGAGCAGCAACAAAAATCGCTCCAGTGA
Upstream 100 bases:
>100_bases GCGCAGTGTTGACTGGGCTCGTTCCACCTGACACCTGCAACGCTCACTCGTTTGGGTATATACTCGGTCTTCTGTCTGAC AACCCAAGAAAAAGGGAAGC
Downstream 100 bases:
>100_bases GGCGACAAAAGGCGTCAGTTTGACTATCTTTTCCCCAAGTTAACAAAAAAACGCCAACCCTGACATGAATCAACACAGGG TGAGCACAAAACTGTAATAC
Product: ferrous iron efflux protein F
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MMKKEYARLVTMAAWTATAVASLLLVVKVAAWWVTGSVSLLASLIDSVLDIAASVVNLIVLRFALQPADHEHAFGHGKAE SLAALAQAMFISGSACFLILNGVDRFFRPHELNAPELGIYVSAIAILVTFGLVLFQRYVVRKTGSQAIAADSLHYQSDLL MNAAIMVALGLSWWGLGQADAIFAIGIGLYILFSAFKMVHDAVQTLLDRKLPDEELEQIHAICLSVAGVIGMHQLRTRMS GPVRFIQLHLELDDNISLLEAHQISDRVEDKLREHFVGADVLIHQDPHSVVLEAEQQQKSLQ
Sequences:
>Translated_302_residues MMKKEYARLVTMAAWTATAVASLLLVVKVAAWWVTGSVSLLASLIDSVLDIAASVVNLIVLRFALQPADHEHAFGHGKAE SLAALAQAMFISGSACFLILNGVDRFFRPHELNAPELGIYVSAIAILVTFGLVLFQRYVVRKTGSQAIAADSLHYQSDLL MNAAIMVALGLSWWGLGQADAIFAIGIGLYILFSAFKMVHDAVQTLLDRKLPDEELEQIHAICLSVAGVIGMHQLRTRMS GPVRFIQLHLELDDNISLLEAHQISDRVEDKLREHFVGADVLIHQDPHSVVLEAEQQQKSLQ >Mature_302_residues MMKKEYARLVTMAAWTATAVASLLLVVKVAAWWVTGSVSLLASLIDSVLDIAASVVNLIVLRFALQPADHEHAFGHGKAE SLAALAQAMFISGSACFLILNGVDRFFRPHELNAPELGIYVSAIAILVTFGLVLFQRYVVRKTGSQAIAADSLHYQSDLL MNAAIMVALGLSWWGLGQADAIFAIGIGLYILFSAFKMVHDAVQTLLDRKLPDEELEQIHAICLSVAGVIGMHQLRTRMS GPVRFIQLHLELDDNISLLEAHQISDRVEDKLREHFVGADVLIHQDPHSVVLEAEQQQKSLQ
Specific function: Cation-efflux transporter that may have a role in detoxification [H]
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. FieF subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790349, Length=290, Percent_Identity=58.9655172413793, Blast_Score=347, Evalue=5e-97,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 33126; Mature: 33126
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKEYARLVTMAAWTATAVASLLLVVKVAAWWVTGSVSLLASLIDSVLDIAASVVNLIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRFALQPADHEHAFGHGKAESLAALAQAMFISGSACFLILNGVDRFFRPHELNAPELGIY HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEEEHHHHHHCCCCCCCCCHHHHH VSAIAILVTFGLVLFQRYVVRKTGSQAIAADSLHYQSDLLMNAAIMVALGLSWWGLGQAD HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH AIFAIGIGLYILFSAFKMVHDAVQTLLDRKLPDEELEQIHAICLSVAGVIGMHQLRTRMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GPVRFIQLHLELDDNISLLEAHQISDRVEDKLREHFVGADVLIHQDPHSVVLEAEQQQKS CCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHEECHHHHCC LQ CC >Mature Secondary Structure MMKKEYARLVTMAAWTATAVASLLLVVKVAAWWVTGSVSLLASLIDSVLDIAASVVNLIV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRFALQPADHEHAFGHGKAESLAALAQAMFISGSACFLILNGVDRFFRPHELNAPELGIY HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHEEEEHHHHHHCCCCCCCCCHHHHH VSAIAILVTFGLVLFQRYVVRKTGSQAIAADSLHYQSDLLMNAAIMVALGLSWWGLGQAD HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH AIFAIGIGLYILFSAFKMVHDAVQTLLDRKLPDEELEQIHAICLSVAGVIGMHQLRTRMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GPVRFIQLHLELDDNISLLEAHQISDRVEDKLREHFVGADVLIHQDPHSVVLEAEQQQKS CCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHEECHHHHCC LQ CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA