| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is cri-1
Identifier: 147673321
GI number: 147673321
Start: 1125809
End: 1127377
Strand: Reverse
Name: cri-1
Synonym: VC0395_A1075
Alternate gene names: NA
Gene position: 1127377-1125809 (Counterclockwise)
Preceding gene: 147675604
Following gene: 147674091
Centisome position: 37.28
GC content: 48.88
Gene sequence:
>1569_bases ATGATAGACATGTTCCACATAAACATTCCTTTTAAAAAGGACGTAATCATCGAAATGGGTGATTGCGGTTTTGTGGACTT TGCAAAACTGGCTGAAAAAACCGAGCTAAAAATCGCTTGCGGGAATGTTGAGTTCTCAGTGGTGAATGACCAAAAGAAGG TGCGTACTGATGACCTATATCATCCTTGGTCTACCATCCCATCATCCTACACTGACATTGCCTGTAAGGTCTTCGATGCT GAGCCTCGTGCCAATGTCTTCTGGGGCTACCTACAACTGAAAGCCTCGCCAGCCAAGGTTATGCAAGGGCACAATGTCTA CGGCTCGGAAGACTTTCGCTTATGTGTTGAATACCTACTCGACTCGCTACAAAAAGCACAGCCGGAACTGTGGGAGTTGT TGGATGTCGGCTTAGCAGAGATGACTCGTATTGACTGCACGTACTCAATTAAATGTGCTAACCCCGATATCCTACGCCAG ACCATCAAACAGATGGGCAATGTCTCTAACCGTTACATCAAACCCGCCCGTAACTCAGACTTTGAAACCACGCTCTACTT CAACCGTGCTACCAAGGCGAATCCGGGAGCAGGGCGCTCATTCGAACTGTGTATCTACACCAAGCATGATGAAATCGCTC ACCAGTTAGCTGACTTGAAACGCCGCGCCAGACAAGGCGATAGCGACCGTTTTAACCGCATCATTGATGAATTATCCAAG CCTGAATTGCAGGCGTTCGCTGCGAACCGATTACGCTTCGAAGGGCGTGCAAAGAAACGCTTCATCCAGAAACATGTTGG CAGCGCAAACCTGTGGCAGGTTATCCGACATGCAGAGCAGTTCGAGGCTAAGAATGGTTACCGCTTCTGCGAATGGATGT TCAAAACCCTGTTCCACGACCTGTTGGAATCGCTGAAAGGTGAAGAGTTAGAGCTGTATAACGACAGCAAAATTAAGCAG TTGCTGCGTGATGCGTACAGCACGATGACACCGAAAGGCAATATCTCATACGCCAAGGCTGACCGACTGTTCCGTTTTTA CATGACACTCTGTGACCGTGGCTATCAAGAGCTAAAGGCGCACAGTTCGAAAGCCACACTTCACCGCAATATGCGTGACT TAATGGCAATTGGCTTCTCCAAAGCTGACTTGCAAAACCTGAGTGAGGGTGAGCGTATGCCATTGGCACAAGTGCTGAAC TTTAACTTCGACAATCAACGTCCGGCCAACTATGTCGAGCCAGTCTCACCGACAGCACACATTCAAGATATGTCACACCT AGCGGTCGCTTATGGTGTGTCGAAACGCCTTGCTCATGAGTTGGGACTGGCAGAAGACCCAATCCATAACCTGAAAGAGA AACTCGGACTGAAAGATGATATCGACATCGACGCTCTGATAGAGGGGCAGTCCATCCCAATTAGCCCACGGCGGGCACTG AGTCTGGTTATCTGGCCAGACGGCGAAATGATCTTAACTGAACACGACATTACACCTGATTTATTCACTGGCGGCGTCAA TCCGGTCAACCACCGGAACCGTAAAGCGGCCAATCAACCAAGAGGGTAA
Upstream 100 bases:
>100_bases CTGAGTATGGAGAGTCTCACTTTCTCGTTGTCAAAAAAGTCTCATGCTGATACCATTATTGAGTACGAAAAGTATCACTA ATGGGTATTGACAGGTTTTT
Downstream 100 bases:
>100_bases CACAATGAAAGTTGTATACATGGGCATTAGCCATCGCAAAGGTATCTCAAACAAAGGGCTAGGCAAGCCTTACGAGATGC ACAAAATCCACTTCGCAACA
Product: plasmid replication protein Cri
Products: NA
Alternate protein names: Phage/Plasmid Replication Protein; Replication Protein; Phage Replication Protein Cri
Number of amino acids: Translated: 522; Mature: 522
Protein sequence:
>522_residues MIDMFHINIPFKKDVIIEMGDCGFVDFAKLAEKTELKIACGNVEFSVVNDQKKVRTDDLYHPWSTIPSSYTDIACKVFDA EPRANVFWGYLQLKASPAKVMQGHNVYGSEDFRLCVEYLLDSLQKAQPELWELLDVGLAEMTRIDCTYSIKCANPDILRQ TIKQMGNVSNRYIKPARNSDFETTLYFNRATKANPGAGRSFELCIYTKHDEIAHQLADLKRRARQGDSDRFNRIIDELSK PELQAFAANRLRFEGRAKKRFIQKHVGSANLWQVIRHAEQFEAKNGYRFCEWMFKTLFHDLLESLKGEELELYNDSKIKQ LLRDAYSTMTPKGNISYAKADRLFRFYMTLCDRGYQELKAHSSKATLHRNMRDLMAIGFSKADLQNLSEGERMPLAQVLN FNFDNQRPANYVEPVSPTAHIQDMSHLAVAYGVSKRLAHELGLAEDPIHNLKEKLGLKDDIDIDALIEGQSIPISPRRAL SLVIWPDGEMILTEHDITPDLFTGGVNPVNHRNRKAANQPRG
Sequences:
>Translated_522_residues MIDMFHINIPFKKDVIIEMGDCGFVDFAKLAEKTELKIACGNVEFSVVNDQKKVRTDDLYHPWSTIPSSYTDIACKVFDA EPRANVFWGYLQLKASPAKVMQGHNVYGSEDFRLCVEYLLDSLQKAQPELWELLDVGLAEMTRIDCTYSIKCANPDILRQ TIKQMGNVSNRYIKPARNSDFETTLYFNRATKANPGAGRSFELCIYTKHDEIAHQLADLKRRARQGDSDRFNRIIDELSK PELQAFAANRLRFEGRAKKRFIQKHVGSANLWQVIRHAEQFEAKNGYRFCEWMFKTLFHDLLESLKGEELELYNDSKIKQ LLRDAYSTMTPKGNISYAKADRLFRFYMTLCDRGYQELKAHSSKATLHRNMRDLMAIGFSKADLQNLSEGERMPLAQVLN FNFDNQRPANYVEPVSPTAHIQDMSHLAVAYGVSKRLAHELGLAEDPIHNLKEKLGLKDDIDIDALIEGQSIPISPRRAL SLVIWPDGEMILTEHDITPDLFTGGVNPVNHRNRKAANQPRG >Mature_522_residues MIDMFHINIPFKKDVIIEMGDCGFVDFAKLAEKTELKIACGNVEFSVVNDQKKVRTDDLYHPWSTIPSSYTDIACKVFDA EPRANVFWGYLQLKASPAKVMQGHNVYGSEDFRLCVEYLLDSLQKAQPELWELLDVGLAEMTRIDCTYSIKCANPDILRQ TIKQMGNVSNRYIKPARNSDFETTLYFNRATKANPGAGRSFELCIYTKHDEIAHQLADLKRRARQGDSDRFNRIIDELSK PELQAFAANRLRFEGRAKKRFIQKHVGSANLWQVIRHAEQFEAKNGYRFCEWMFKTLFHDLLESLKGEELELYNDSKIKQ LLRDAYSTMTPKGNISYAKADRLFRFYMTLCDRGYQELKAHSSKATLHRNMRDLMAIGFSKADLQNLSEGERMPLAQVLN FNFDNQRPANYVEPVSPTAHIQDMSHLAVAYGVSKRLAHELGLAEDPIHNLKEKLGLKDDIDIDALIEGQSIPISPRRAL SLVIWPDGEMILTEHDITPDLFTGGVNPVNHRNRKAANQPRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59744; Mature: 59744
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDMFHINIPFKKDVIIEMGDCGFVDFAKLAEKTELKIACGNVEFSVVNDQKKVRTDDLY CCEEEEECCCCCCCEEEEECCCCCHHHHHHHCCCCEEEEECCEEEEEECCCHHCCCCCCC HPWSTIPSSYTDIACKVFDAEPRANVFWGYLQLKASPAKVMQGHNVYGSEDFRLCVEYLL CCHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHH DSLQKAQPELWELLDVGLAEMTRIDCTYSIKCANPDILRQTIKQMGNVSNRYIKPARNSD HHHHHCCHHHHHHHHHHHHHHHEECCEEEEEECCHHHHHHHHHHHCCCHHHEECCCCCCC FETTLYFNRATKANPGAGRSFELCIYTKHDEIAHQLADLKRRARQGDSDRFNRIIDELSK CEEEEEEECCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC PELQAFAANRLRFEGRAKKRFIQKHVGSANLWQVIRHAEQFEAKNGYRFCEWMFKTLFHD CHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LLESLKGEELELYNDSKIKQLLRDAYSTMTPKGNISYAKADRLFRFYMTLCDRGYQELKA HHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH HSSKATLHRNMRDLMAIGFSKADLQNLSEGERMPLAQVLNFNFDNQRPANYVEPVSPTAH CCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHH IQDMSHLAVAYGVSKRLAHELGLAEDPIHNLKEKLGLKDDIDIDALIEGQSIPISPRRAL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHEE SLVIWPDGEMILTEHDITPDLFTGGVNPVNHRNRKAANQPRG EEEEECCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIDMFHINIPFKKDVIIEMGDCGFVDFAKLAEKTELKIACGNVEFSVVNDQKKVRTDDLY CCEEEEECCCCCCCEEEEECCCCCHHHHHHHCCCCEEEEECCEEEEEECCCHHCCCCCCC HPWSTIPSSYTDIACKVFDAEPRANVFWGYLQLKASPAKVMQGHNVYGSEDFRLCVEYLL CCHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEECCHHHHHCCCCCCCCHHHHHHHHHHH DSLQKAQPELWELLDVGLAEMTRIDCTYSIKCANPDILRQTIKQMGNVSNRYIKPARNSD HHHHHCCHHHHHHHHHHHHHHHEECCEEEEEECCHHHHHHHHHHHCCCHHHEECCCCCCC FETTLYFNRATKANPGAGRSFELCIYTKHDEIAHQLADLKRRARQGDSDRFNRIIDELSK CEEEEEEECCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC PELQAFAANRLRFEGRAKKRFIQKHVGSANLWQVIRHAEQFEAKNGYRFCEWMFKTLFHD CHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LLESLKGEELELYNDSKIKQLLRDAYSTMTPKGNISYAKADRLFRFYMTLCDRGYQELKA HHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH HSSKATLHRNMRDLMAIGFSKADLQNLSEGERMPLAQVLNFNFDNQRPANYVEPVSPTAH CCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHH IQDMSHLAVAYGVSKRLAHELGLAEDPIHNLKEKLGLKDDIDIDALIEGQSIPISPRRAL HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHEE SLVIWPDGEMILTEHDITPDLFTGGVNPVNHRNRKAANQPRG EEEEECCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA