| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673307
Identifier: 147673307
GI number: 147673307
Start: 2510667
End: 2511908
Strand: Reverse
Name: 147673307
Synonym: VC0395_A2357
Alternate gene names: NA
Gene position: 2511908-2510667 (Counterclockwise)
Preceding gene: 147673629
Following gene: 147674505
Centisome position: 83.06
GC content: 38.97
Gene sequence:
>1242_bases ATGGCAGAGTTGTTTTATCAAGGTAGCAGTGAAATTGATCGAAAAGACTTAGAGAGTCATTTGTCCTCTTTGTGTCAACT AGAAAACGTAGGGGTATTACTTGGTGCAGGCGCTTCCAAGAGTGCAGGTGGTATGGTCATGAAAGAGATTTGGTTAGACT TTAAATCTCGAAATGAACCAATGCTTCCGATATTGAGAGATCAGTACAAACTGATTAGCCAAGAGGAGATTGATGCTGGC TCTGTCAATATTGAACTTTTGATTGATGAGGTGCTTAAAAACAAGAGCGTGATGGATACTTGGCAGCAAGACTCAACTGC TTTGTTTAATGTCTTGGTTGAACTATATCGCTCAGTAACCAAAGCTGCCTTATTGGTAAATTCAGACTTTCCTGAACTTC ACATAGGGAAGAATGAGAAGTTTGATAAACATAGAAATTTACTAGAAAAGCTGCTGTCAAATCGCCAACCTGGTCAAGCT GCACCATCCATTTTCACTACAAATTATGATTTAGCCATAGAGTGGTCAGCAGAAGAGTCAGGGATCAACCTCATAAATGG CTTTTCGGGCATTCATTCAAGAACCTTTCAACCTCACTCCTTCGATTTAGGGTTTCGTAATATAAACGCAGTGGGAGAAG CTCGTTTCGGACATTACAACATGTACCTATACAAGCTTCACGGTTCATTGACTTGGATTCAAGATGAAAGCGGGGAAGTC ATCGAATGCACTAGTTCAAAAGCTTACCAAGATTTCATTAACCCTCTGATAAAAAATAGTAATTTCACTGAGAATCAACG TCTAATTTATCCTGGAGCCAACAAGTACCACCATACAATTGGTTTTGTATATGGTGAAATGTTCCGCCGATTTAGTGAGT TTTTGACTAAACCACAGACCACTCTATTCGTTAATGGTTACGGTTTTGGAGATTACCACATCAATAGAATTATTCTTGGC GCTTTACTTAATCCATCTCTTCATATCGTTATCTGCTATCCAGAATTGGCAGAGCTTTGTGCAAACAGTCAGCTTCAAAA TGGATTGAGTCAAGCCCAACGATGCATTGATAAAATAAGAAAAATGAAACTAAATCAAGTCACAATCATAGGCGGCACTG ATGCTTACTTTGATAACTTCGTGGATTTGATTCCAAAACCTGTTTTGTTCCCTAAAAATAATGCAGCCAAAGTGATAGCT GAAGCTATTCAAGACCTTGGTTCAAGTAACAATGGGGAATAG
Upstream 100 bases:
>100_bases TCAAATCGATGTCTTTGTAATCTCTACACCTTCCCCACAATTTAGCACACAGGTAATATGATACAATCATCGTATTGTGC GGTTTTGCGGATACATAAAA
Downstream 100 bases:
>100_bases GCGATGAGCTACAACGATATGTCCCAAATAGGATACGTAGTATCTCTAGAAGGCACTAAAATTCGGGTAAATCTGTTAGA TAGCCATAAAGGACAACTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MAELFYQGSSEIDRKDLESHLSSLCQLENVGVLLGAGASKSAGGMVMKEIWLDFKSRNEPMLPILRDQYKLISQEEIDAG SVNIELLIDEVLKNKSVMDTWQQDSTALFNVLVELYRSVTKAALLVNSDFPELHIGKNEKFDKHRNLLEKLLSNRQPGQA APSIFTTNYDLAIEWSAEESGINLINGFSGIHSRTFQPHSFDLGFRNINAVGEARFGHYNMYLYKLHGSLTWIQDESGEV IECTSSKAYQDFINPLIKNSNFTENQRLIYPGANKYHHTIGFVYGEMFRRFSEFLTKPQTTLFVNGYGFGDYHINRIILG ALLNPSLHIVICYPELAELCANSQLQNGLSQAQRCIDKIRKMKLNQVTIIGGTDAYFDNFVDLIPKPVLFPKNNAAKVIA EAIQDLGSSNNGE
Sequences:
>Translated_413_residues MAELFYQGSSEIDRKDLESHLSSLCQLENVGVLLGAGASKSAGGMVMKEIWLDFKSRNEPMLPILRDQYKLISQEEIDAG SVNIELLIDEVLKNKSVMDTWQQDSTALFNVLVELYRSVTKAALLVNSDFPELHIGKNEKFDKHRNLLEKLLSNRQPGQA APSIFTTNYDLAIEWSAEESGINLINGFSGIHSRTFQPHSFDLGFRNINAVGEARFGHYNMYLYKLHGSLTWIQDESGEV IECTSSKAYQDFINPLIKNSNFTENQRLIYPGANKYHHTIGFVYGEMFRRFSEFLTKPQTTLFVNGYGFGDYHINRIILG ALLNPSLHIVICYPELAELCANSQLQNGLSQAQRCIDKIRKMKLNQVTIIGGTDAYFDNFVDLIPKPVLFPKNNAAKVIA EAIQDLGSSNNGE >Mature_412_residues AELFYQGSSEIDRKDLESHLSSLCQLENVGVLLGAGASKSAGGMVMKEIWLDFKSRNEPMLPILRDQYKLISQEEIDAGS VNIELLIDEVLKNKSVMDTWQQDSTALFNVLVELYRSVTKAALLVNSDFPELHIGKNEKFDKHRNLLEKLLSNRQPGQAA PSIFTTNYDLAIEWSAEESGINLINGFSGIHSRTFQPHSFDLGFRNINAVGEARFGHYNMYLYKLHGSLTWIQDESGEVI ECTSSKAYQDFINPLIKNSNFTENQRLIYPGANKYHHTIGFVYGEMFRRFSEFLTKPQTTLFVNGYGFGDYHINRIILGA LLNPSLHIVICYPELAELCANSQLQNGLSQAQRCIDKIRKMKLNQVTIIGGTDAYFDNFVDLIPKPVLFPKNNAAKVIAE AIQDLGSSNNGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46506; Mature: 46375
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELFYQGSSEIDRKDLESHLSSLCQLENVGVLLGAGASKSAGGMVMKEIWLDFKSRNEP CCCEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCC MLPILRDQYKLISQEEIDAGSVNIELLIDEVLKNKSVMDTWQQDSTALFNVLVELYRSVT CCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHH KAALLVNSDFPELHIGKNEKFDKHRNLLEKLLSNRQPGQAAPSIFTTNYDLAIEWSAEES HHHEEECCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEEECCCCC GINLINGFSGIHSRTFQPHSFDLGFRNINAVGEARFGHYNMYLYKLHGSLTWIQDESGEV CCCEECCCCCHHCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEEEEEECCEEEEECCCCCE IECTSSKAYQDFINPLIKNSNFTENQRLIYPGANKYHHTIGFVYGEMFRRFSEFLTKPQT EEECCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE TLFVNGYGFGDYHINRIILGALLNPSLHIVICYPELAELCANSQLQNGLSQAQRCIDKIR EEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHH KMKLNQVTIIGGTDAYFDNFVDLIPKPVLFPKNNAAKVIAEAIQDLGSSNNGE HCCCCEEEEEECCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AELFYQGSSEIDRKDLESHLSSLCQLENVGVLLGAGASKSAGGMVMKEIWLDFKSRNEP CCEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCC MLPILRDQYKLISQEEIDAGSVNIELLIDEVLKNKSVMDTWQQDSTALFNVLVELYRSVT CCHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHH KAALLVNSDFPELHIGKNEKFDKHRNLLEKLLSNRQPGQAAPSIFTTNYDLAIEWSAEES HHHEEECCCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEEECCCCC GINLINGFSGIHSRTFQPHSFDLGFRNINAVGEARFGHYNMYLYKLHGSLTWIQDESGEV CCCEECCCCCHHCCCCCCCCCCCCCCCCCHHCCCCCCEEEEEEEEEECCEEEEECCCCCE IECTSSKAYQDFINPLIKNSNFTENQRLIYPGANKYHHTIGFVYGEMFRRFSEFLTKPQT EEECCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE TLFVNGYGFGDYHINRIILGALLNPSLHIVICYPELAELCANSQLQNGLSQAQRCIDKIR EEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHH KMKLNQVTIIGGTDAYFDNFVDLIPKPVLFPKNNAAKVIAEAIQDLGSSNNGE HCCCCEEEEEECCHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA