| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is yqjG [H]
Identifier: 147673283
GI number: 147673283
Start: 655170
End: 656117
Strand: Direct
Name: yqjG [H]
Synonym: VC0395_A0614
Alternate gene names: 147673283
Gene position: 655170-656117 (Clockwise)
Preceding gene: 147673695
Following gene: 147673932
Centisome position: 21.67
GC content: 47.15
Gene sequence:
>948_bases ATGGGCAAGCTAATTAAAGGCAAATGGCACGATGTTTGGTACGACACCAAACAACATGATGGCGAATTTATACGCGAAGA TGCAGGGTTTCGTGACTGGGTGAAAGCGACGCCTGATGCGCAATTTGCTGCAGAATCTGGCCGTTATCATCTCTATGTCT CTTTGGCGTGTCCGTGGGCACATCGCACCTTGATTTTTCGTGCTCTCAAAGGGCTGCAAACGCATATTGATGTGACGATT GTCTGTCCGGATATGCTCTCACATGGTTGGCAGTTTGGCATACCAGAGCCGCTGTATGGCTACACTCAACTACATCAACT TTATACCCATGCTAAAGCCGATTACACCGGACGAGTCACGGTGCCTGTGTTGTGGGATAAAAAACTTCACACGATTGTGA GCAATGAATCTTCCGAAATCATCCGCATGTTCAACAGTGCATTTAATGAGTTAACGGGCAATCAAACCGATTATTACCCT CAAGCGCTGCGCACAGTGATTGATGAGTGGAATGAGTTCATCTATCCCAACATAAACAATGGGGTATATCGTTGTGGTTT TGCGACCACGCAAAAAGCCTATGAAGAAGCGTTTGAAGCGCTGTTTGCGGCGTTGGATAAAGTTGATCAGCATCTGACAA CGCATCGCTATTTAGCGGGAAACCAAATCACCGAAGCGGACTGGCGTTTGTTTACCACCTTAGTGCGTTTTGATGCGGTG TATGTCGGGCATTTCAAATGTAACCGCCAGCGTATTACGGATTACCCACATCTGAGCGGTTATTTAAGGGAGTTATACCA AGTCCCCGGCATCCAAGAGACGGTCGATTTTTACCACATTAAACGCCATTACTATTTCAGTCATACCACGATCAACCCCA CTCAAGTTGTGCCAGTCGGGCCGCAAGTGGATCTACTCAGTCCACACCAGCGTGAACGAATTGGTTGA
Upstream 100 bases:
>100_bases TTTTGTATTCGAATATTTTGAACAACACGACCAATCGCCTTGGGTTAAGTGGCGTGCCCAGTTGCTTATAATGCCTAAAA GATGAGAATTTGGGGGCAAG
Downstream 100 bases:
>100_bases AAAGGGTAGATAGCAATCTATAAAGCGCATAAAAAAGCCCCCGAATGTCGGGGGCTTTTGCCTATTTATCACCAGAAAAG ATGACTGTGACTAGCGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MGKLIKGKWHDVWYDTKQHDGEFIREDAGFRDWVKATPDAQFAAESGRYHLYVSLACPWAHRTLIFRALKGLQTHIDVTI VCPDMLSHGWQFGIPEPLYGYTQLHQLYTHAKADYTGRVTVPVLWDKKLHTIVSNESSEIIRMFNSAFNELTGNQTDYYP QALRTVIDEWNEFIYPNINNGVYRCGFATTQKAYEEAFEALFAALDKVDQHLTTHRYLAGNQITEADWRLFTTLVRFDAV YVGHFKCNRQRITDYPHLSGYLRELYQVPGIQETVDFYHIKRHYYFSHTTINPTQVVPVGPQVDLLSPHQRERIG
Sequences:
>Translated_315_residues MGKLIKGKWHDVWYDTKQHDGEFIREDAGFRDWVKATPDAQFAAESGRYHLYVSLACPWAHRTLIFRALKGLQTHIDVTI VCPDMLSHGWQFGIPEPLYGYTQLHQLYTHAKADYTGRVTVPVLWDKKLHTIVSNESSEIIRMFNSAFNELTGNQTDYYP QALRTVIDEWNEFIYPNINNGVYRCGFATTQKAYEEAFEALFAALDKVDQHLTTHRYLAGNQITEADWRLFTTLVRFDAV YVGHFKCNRQRITDYPHLSGYLRELYQVPGIQETVDFYHIKRHYYFSHTTINPTQVVPVGPQVDLLSPHQRERIG >Mature_314_residues GKLIKGKWHDVWYDTKQHDGEFIREDAGFRDWVKATPDAQFAAESGRYHLYVSLACPWAHRTLIFRALKGLQTHIDVTIV CPDMLSHGWQFGIPEPLYGYTQLHQLYTHAKADYTGRVTVPVLWDKKLHTIVSNESSEIIRMFNSAFNELTGNQTDYYPQ ALRTVIDEWNEFIYPNINNGVYRCGFATTQKAYEEAFEALFAALDKVDQHLTTHRYLAGNQITEADWRLFTTLVRFDAVY VGHFKCNRQRITDYPHLSGYLRELYQVPGIQETVDFYHIKRHYYFSHTTINPTQVVPVGPQVDLLSPHQRERIG
Specific function: Unknown
COG id: COG0435
COG function: function code O; Predicted glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1789489, Length=324, Percent_Identity=58.3333333333333, Blast_Score=378, Evalue=1e-106, Organism=Saccharomyces cerevisiae, GI6322929, Length=359, Percent_Identity=38.1615598885794, Blast_Score=222, Evalue=6e-59, Organism=Saccharomyces cerevisiae, GI6323906, Length=360, Percent_Identity=36.9444444444444, Blast_Score=205, Evalue=8e-54, Organism=Saccharomyces cerevisiae, GI6321593, Length=338, Percent_Identity=31.6568047337278, Blast_Score=152, Evalue=5e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR016639 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C [H]
EC number: NA
Molecular weight: Translated: 36710; Mature: 36579
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLIKGKWHDVWYDTKQHDGEFIREDAGFRDWVKATPDAQFAAESGRYHLYVSLACPWA CCCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHCCCCHHHHHCCCCEEEEEEEECCHH HRTLIFRALKGLQTHIDVTIVCPDMLSHGWQFGIPEPLYGYTQLHQLYTHAKADYTGRVT HHHHHHHHHHHHHHHEEEEEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE VPVLWDKKLHTIVSNESSEIIRMFNSAFNELTGNQTDYYPQALRTVIDEWNEFIYPNINN EEEEECCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEECCCCCC GVYRCGFATTQKAYEEAFEALFAALDKVDQHLTTHRYLAGNQITEADWRLFTTLVRFDAV CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHE YVGHFKCNRQRITDYPHLSGYLRELYQVPGIQETVDFYHIKRHYYFSHTTINPTQVVPVG EEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCCEEEECC PQVDLLSPHQRERIG CCCCCCCCHHHHCCC >Mature Secondary Structure GKLIKGKWHDVWYDTKQHDGEFIREDAGFRDWVKATPDAQFAAESGRYHLYVSLACPWA CCCCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHCCCCHHHHHCCCCEEEEEEEECCHH HRTLIFRALKGLQTHIDVTIVCPDMLSHGWQFGIPEPLYGYTQLHQLYTHAKADYTGRVT HHHHHHHHHHHHHHHEEEEEECHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEE VPVLWDKKLHTIVSNESSEIIRMFNSAFNELTGNQTDYYPQALRTVIDEWNEFIYPNINN EEEEECCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEECCCCCC GVYRCGFATTQKAYEEAFEALFAALDKVDQHLTTHRYLAGNQITEADWRLFTTLVRFDAV CEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHE YVGHFKCNRQRITDYPHLSGYLRELYQVPGIQETVDFYHIKRHYYFSHTTINPTQVVPVG EEEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCCCEEEECC PQVDLLSPHQRERIG CCCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]