Click here to switch to the map view.

The map label for this gene is ydiY [C]

Identifier: 147673196

GI number: 147673196

Start: 2927745

End: 2928554

Strand: Reverse

Name: ydiY [C]

Synonym: VC0395_A2781

Alternate gene names: 147673196

Gene position: 2928554-2927745 (Counterclockwise)

Preceding gene: 147675338

Following gene: 147674695

Centisome position: 96.84

GC content: 43.83

Gene sequence:

>810_bases
ATGAATTTTTACTATGCCACCTCAATAGTGATCAAAGAGGTTGTTGTGTCCACCAAATGGCTTTTAGGCATTAGCTTGAT
GCTGTCAACAGTAGCGCAAGCCAATGAAAATTCTAATCAGGATACGGACATCAGCATTCCCTCTCCTTGGAAGCATCAAG
TCGAGTTTGGCTATCAGGCGCACTCCGGTAATACCGAGTCAGAGTCACTCAATTCACGCTTAAAATCGGAATATACCATG
GGTCGTCACCGTACTTATGGGGAGTGGAAGTTTTATAAGCTTGATAAAAATGGCAAAGAAGATAAACGCCAGTCCACCTT
CGCCTTCCAAAGCGACTATAAACTCGGACCGAAGACGTATTTATACGGCAGCTTTTACGGCACCAACTCGCGTTACACCG
CTTATTTCAAAGACCATACCCTATCAGGAGGGCTCGGTTATCAATTCGCATATACCGATGAGATGGTTTTAGAGCTGGAG
TTAGGGCCTGGCTTTCGCTACCAAAAACCCAACCTAGACGAAATTGATGATGACGATATCGTTTTTCCCGATCTCGTTCA
GGAAGCGATATTTCGTAGCAATCTTAAAGCTGAGTGGCAAGCTTTAAACAACCTCAGATTTGAGGCAGAAATGACCATGG
TTTCAGGGCGAAGTAACACCAGTCTTGATAGCAATATCAGTTTAACCAACGACATCACTGACCACATTGCCTTAAAAATT
CGCCAATCACGCCAATACCATAACCGAGTGCCGGAAGGATTAAGCAAAGCAGACAGCGTGATTTCGGTTAATCTACTGTT
TGAGTTTTAA

Upstream 100 bases:

>100_bases
TGTCCGTCATTATAACGAGAATCCGTCATTTGTAATTAAAGCAACGCAAGTTTGTGCGCCGCCTAACCAGAATTGACCTA
GGGTTGACCCAAACTCAGTA

Downstream 100 bases:

>100_bases
ATGCTACCCATAAAAAAACACCAGCCGAAGCTGGTGTTTTCGTATTCGTCAGTAACTGAAATTACTCAGCAACAACTTGT
ACTTTTGCAGTTGCGAACAC

Product: hypothetical protein

Products: NA

Alternate protein names: Outer Membrane Protein

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MNFYYATSIVIKEVVVSTKWLLGISLMLSTVAQANENSNQDTDISIPSPWKHQVEFGYQAHSGNTESESLNSRLKSEYTM
GRHRTYGEWKFYKLDKNGKEDKRQSTFAFQSDYKLGPKTYLYGSFYGTNSRYTAYFKDHTLSGGLGYQFAYTDEMVLELE
LGPGFRYQKPNLDEIDDDDIVFPDLVQEAIFRSNLKAEWQALNNLRFEAEMTMVSGRSNTSLDSNISLTNDITDHIALKI
RQSRQYHNRVPEGLSKADSVISVNLLFEF

Sequences:

>Translated_269_residues
MNFYYATSIVIKEVVVSTKWLLGISLMLSTVAQANENSNQDTDISIPSPWKHQVEFGYQAHSGNTESESLNSRLKSEYTM
GRHRTYGEWKFYKLDKNGKEDKRQSTFAFQSDYKLGPKTYLYGSFYGTNSRYTAYFKDHTLSGGLGYQFAYTDEMVLELE
LGPGFRYQKPNLDEIDDDDIVFPDLVQEAIFRSNLKAEWQALNNLRFEAEMTMVSGRSNTSLDSNISLTNDITDHIALKI
RQSRQYHNRVPEGLSKADSVISVNLLFEF
>Mature_269_residues
MNFYYATSIVIKEVVVSTKWLLGISLMLSTVAQANENSNQDTDISIPSPWKHQVEFGYQAHSGNTESESLNSRLKSEYTM
GRHRTYGEWKFYKLDKNGKEDKRQSTFAFQSDYKLGPKTYLYGSFYGTNSRYTAYFKDHTLSGGLGYQFAYTDEMVLELE
LGPGFRYQKPNLDEIDDDDIVFPDLVQEAIFRSNLKAEWQALNNLRFEAEMTMVSGRSNTSLDSNISLTNDITDHIALKI
RQSRQYHNRVPEGLSKADSVISVNLLFEF

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=249, Percent_Identity=25.7028112449799, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30903; Mature: 30903

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFYYATSIVIKEVVVSTKWLLGISLMLSTVAQANENSNQDTDISIPSPWKHQVEFGYQA
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEECEEE
HSGNTESESLNSRLKSEYTMGRHRTYGEWKFYKLDKNGKEDKRQSTFAFQSDYKLGPKTY
CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHEEECCCCCCCCCEE
LYGSFYGTNSRYTAYFKDHTLSGGLGYQFAYTDEMVLELELGPGFRYQKPNLDEIDDDDI
EEEEEECCCCEEEEEEECCCCCCCCCEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCC
VFPDLVQEAIFRSNLKAEWQALNNLRFEAEMTMVSGRSNTSLDSNISLTNDITDHIALKI
CCHHHHHHHHHHCCCHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCEECCCHHHHHHHHH
RQSRQYHNRVPEGLSKADSVISVNLLFEF
HHHHHHHHHCCHHHHHHCCEEEEEEEEEC
>Mature Secondary Structure
MNFYYATSIVIKEVVVSTKWLLGISLMLSTVAQANENSNQDTDISIPSPWKHQVEFGYQA
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEECEEE
HSGNTESESLNSRLKSEYTMGRHRTYGEWKFYKLDKNGKEDKRQSTFAFQSDYKLGPKTY
CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHEEECCCCCCCCCEE
LYGSFYGTNSRYTAYFKDHTLSGGLGYQFAYTDEMVLELELGPGFRYQKPNLDEIDDDDI
EEEEEECCCCEEEEEEECCCCCCCCCEEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCC
VFPDLVQEAIFRSNLKAEWQALNNLRFEAEMTMVSGRSNTSLDSNISLTNDITDHIALKI
CCHHHHHHHHHHCCCHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCEECCCHHHHHHHHH
RQSRQYHNRVPEGLSKADSVISVNLLFEF
HHHHHHHHHCCHHHHHHCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA