| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is abgT [H]
Identifier: 147673146
GI number: 147673146
Start: 431927
End: 433531
Strand: Direct
Name: abgT [H]
Synonym: VC0395_A0404
Alternate gene names: 147673146
Gene position: 431927-433531 (Clockwise)
Preceding gene: 147674880
Following gene: 147675591
Centisome position: 14.28
GC content: 49.72
Gene sequence:
>1605_bases ATGACAAGGAGGGAACAGATGAGTTCATCTGCTTCAATAAATCAAAACGCACCTAAGAAACCTTTAATTACCCGTTTTCT TGATGGTGTGGAATATTTGGGGAACCTATTACCCCATCCCATCACATTATTTGCCATTTTCTGTGTTGTACTACTGGTTG CTTCGGGTATCGCTGGGTACTTCGAGCTGTCAGTTGTGGACCCTCGTCCTGAAGGCGCGAAAGGTCGTGCTGCAGATGGC ATGATCCATGTTGTCAGCTTACTCAATGCCGATGGATTAGAGCTTATCGTAACCAACTTAGTGAAAAACTTTGTCGGCTT TGCTCCTTTAGGCACCGTGTTGGTGGCCATGCTGGGTGTCGCCATTGCGGAGCACTCTGGGTTGCTCTCTGCGGCAATGC GTGGTCTGGTGATGGGCGCTTCAAAGCGCATGGTCACTTTCACTGTCGTGTTTGCCGGTATTATTTCTAACACGGCATCT GAATTAGGCTACGTGGTTCTTATTCCACTGGCAGCCATGCTGTTCCATTCGCTAGGTCGTCACCCGCTCGCGGGACTCGC TGCGGCGTTTGCAGGTGTTTCTGGTGGTTATTCGGCAAACCTGTTAATTGGCACCGTCGATCCTTTGCTTTCAGGGATTA CCGAAACCGCCGCTCGTATGATTGATCCTACTTACAGCGTTGGTCCTGAAGTCAACTGGTACTTTATGGCGGCTTCTACC TTTGTGATTGCGATTTTAGGTGCATTCGTGACCGAGAAAATCGTTGAGCCCAAACTGGGCAAATATGATGTATCAGAAGC CAGCGATGACTTAAGCCAAGACAAAATGGGTTCTCTGACGGCGCTAGAGAAAAAAGCGCTGGCCTATGCTGGATTAGCGG TTGTTGTGGTGAGCGCATTATTGGCTTGGACAATTGTACCGGCGGATGGCGTGCTGCGTGGAGAGGATGGCCTCGTTTCT GGTTCGCCATTTTTAAAGAGCATCGTCGCCTTTATCTTTATCTTTTTTGCTATTCCCGGCTATGTCTATGGCCGTGTGGT TGGCACGATGAAAACCGATCGTGATGTGATTAATGCGATGGCGAAATCGATGTCTTCTATGGGCATGTACATTGTGCTGG TATTTTTTGCGGCGCAGTTCGTTGCCTTCTTTAGTTGGACAAAGTTTGGTCAAGTATTGGCGGTACTCGGCGCGGATTTC CTGAAAGACATCGGACTGACGGGACCCATGCTGTTCTTCGCCTTCATTTTGATGTGTGGTTACATCAACCTGATGATTGG CTCTGCCTCTGCGCAATGGGCAGTCACCGCGCCGATTTTCGTGCCTATGCTGATGTTGGTGGGCTATGCTCCAGAAGTGA TTCAAGCGGCCTATCGTATCGGTGACTCGGTCACTAACATCATCACCCCGATGATGAGCTACTTTGGCTTGATTCTGGCG GTGGCGACGCGTTATATGAAAAACCTCGGTATCGGTACTTTGATCGCAACCATGTTGCCGTATTCGGTGGTGTTTATGGT GGGTTGGAGCTTACTGTTCTACGTGTGGGTATTTGTGTTAGGTCTGCCGGTTGGCCCTGGCGCCGCCACTTACTACACGC CATAG
Upstream 100 bases:
>100_bases ATTTGGATAAATTTTGTAACATTTTTGCTTTTTAATTTACCTTTTTTGTCGAGTACTCTGCGCGCGCTTTTGACATTTCT GTCACAAATGCATAGGAATC
Downstream 100 bases:
>100_bases TGTTTGTTCTGCATACGAAAAAGCCTGCGCATATCGCAGGCTTTTTTACACATCAGAAAATCTCATTACCCAGTGCGCTT AGCCAAAATTCTGTCCAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 534; Mature: 533
Protein sequence:
>534_residues MTRREQMSSSASINQNAPKKPLITRFLDGVEYLGNLLPHPITLFAIFCVVLLVASGIAGYFELSVVDPRPEGAKGRAADG MIHVVSLLNADGLELIVTNLVKNFVGFAPLGTVLVAMLGVAIAEHSGLLSAAMRGLVMGASKRMVTFTVVFAGIISNTAS ELGYVVLIPLAAMLFHSLGRHPLAGLAAAFAGVSGGYSANLLIGTVDPLLSGITETAARMIDPTYSVGPEVNWYFMAAST FVIAILGAFVTEKIVEPKLGKYDVSEASDDLSQDKMGSLTALEKKALAYAGLAVVVVSALLAWTIVPADGVLRGEDGLVS GSPFLKSIVAFIFIFFAIPGYVYGRVVGTMKTDRDVINAMAKSMSSMGMYIVLVFFAAQFVAFFSWTKFGQVLAVLGADF LKDIGLTGPMLFFAFILMCGYINLMIGSASAQWAVTAPIFVPMLMLVGYAPEVIQAAYRIGDSVTNIITPMMSYFGLILA VATRYMKNLGIGTLIATMLPYSVVFMVGWSLLFYVWVFVLGLPVGPGAATYYTP
Sequences:
>Translated_534_residues MTRREQMSSSASINQNAPKKPLITRFLDGVEYLGNLLPHPITLFAIFCVVLLVASGIAGYFELSVVDPRPEGAKGRAADG MIHVVSLLNADGLELIVTNLVKNFVGFAPLGTVLVAMLGVAIAEHSGLLSAAMRGLVMGASKRMVTFTVVFAGIISNTAS ELGYVVLIPLAAMLFHSLGRHPLAGLAAAFAGVSGGYSANLLIGTVDPLLSGITETAARMIDPTYSVGPEVNWYFMAAST FVIAILGAFVTEKIVEPKLGKYDVSEASDDLSQDKMGSLTALEKKALAYAGLAVVVVSALLAWTIVPADGVLRGEDGLVS GSPFLKSIVAFIFIFFAIPGYVYGRVVGTMKTDRDVINAMAKSMSSMGMYIVLVFFAAQFVAFFSWTKFGQVLAVLGADF LKDIGLTGPMLFFAFILMCGYINLMIGSASAQWAVTAPIFVPMLMLVGYAPEVIQAAYRIGDSVTNIITPMMSYFGLILA VATRYMKNLGIGTLIATMLPYSVVFMVGWSLLFYVWVFVLGLPVGPGAATYYTP >Mature_533_residues TRREQMSSSASINQNAPKKPLITRFLDGVEYLGNLLPHPITLFAIFCVVLLVASGIAGYFELSVVDPRPEGAKGRAADGM IHVVSLLNADGLELIVTNLVKNFVGFAPLGTVLVAMLGVAIAEHSGLLSAAMRGLVMGASKRMVTFTVVFAGIISNTASE LGYVVLIPLAAMLFHSLGRHPLAGLAAAFAGVSGGYSANLLIGTVDPLLSGITETAARMIDPTYSVGPEVNWYFMAASTF VIAILGAFVTEKIVEPKLGKYDVSEASDDLSQDKMGSLTALEKKALAYAGLAVVVVSALLAWTIVPADGVLRGEDGLVSG SPFLKSIVAFIFIFFAIPGYVYGRVVGTMKTDRDVINAMAKSMSSMGMYIVLVFFAAQFVAFFSWTKFGQVLAVLGADFL KDIGLTGPMLFFAFILMCGYINLMIGSASAQWAVTAPIFVPMLMLVGYAPEVIQAAYRIGDSVTNIITPMMSYFGLILAV ATRYMKNLGIGTLIATMLPYSVVFMVGWSLLFYVWVFVLGLPVGPGAATYYTP
Specific function: Essential for aminobenzoyl-glutamate utilization. May transport aminobenzoyl-glutamate into the cell. Seems also to increase the sensitivity to low levels of aminobenzoyl-glutamate. Sufficient to confer aminobenzoyl-glutamate utilization phenotype [H]
COG id: COG2978
COG function: function code H; Putative p-aminobenzoyl-glutamate transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081879, Length=500, Percent_Identity=38.4, Blast_Score=333, Evalue=2e-92,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004697 - InterPro: IPR011540 [H]
Pfam domain/function: PF03806 ABG_transport [H]
EC number: NA
Molecular weight: Translated: 56819; Mature: 56688
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRREQMSSSASINQNAPKKPLITRFLDGVEYLGNLLPHPITLFAIFCVVLLVASGIAGY CCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC FELSVVDPRPEGAKGRAADGMIHVVSLLNADGLELIVTNLVKNFVGFAPLGTVLVAMLGV EEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH AIAEHSGLLSAAMRGLVMGASKRMVTFTVVFAGIISNTASELGYVVLIPLAAMLFHSLGR HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HPLAGLAAAFAGVSGGYSANLLIGTVDPLLSGITETAARMIDPTYSVGPEVNWYFMAAST CHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHH FVIAILGAFVTEKIVEPKLGKYDVSEASDDLSQDKMGSLTALEKKALAYAGLAVVVVSAL HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LAWTIVPADGVLRGEDGLVSGSPFLKSIVAFIFIFFAIPGYVYGRVVGTMKTDRDVINAM HHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AKSMSSMGMYIVLVFFAAQFVAFFSWTKFGQVLAVLGADFLKDIGLTGPMLFFAFILMCG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH YINLMIGSASAQWAVTAPIFVPMLMLVGYAPEVIQAAYRIGDSVTNIITPMMSYFGLILA HHHHHHCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VATRYMKNLGIGTLIATMLPYSVVFMVGWSLLFYVWVFVLGLPVGPGAATYYTP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TRREQMSSSASINQNAPKKPLITRFLDGVEYLGNLLPHPITLFAIFCVVLLVASGIAGY CCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCC FELSVVDPRPEGAKGRAADGMIHVVSLLNADGLELIVTNLVKNFVGFAPLGTVLVAMLGV EEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH AIAEHSGLLSAAMRGLVMGASKRMVTFTVVFAGIISNTASELGYVVLIPLAAMLFHSLGR HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HPLAGLAAAFAGVSGGYSANLLIGTVDPLLSGITETAARMIDPTYSVGPEVNWYFMAAST CHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHH FVIAILGAFVTEKIVEPKLGKYDVSEASDDLSQDKMGSLTALEKKALAYAGLAVVVVSAL HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LAWTIVPADGVLRGEDGLVSGSPFLKSIVAFIFIFFAIPGYVYGRVVGTMKTDRDVINAM HHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AKSMSSMGMYIVLVFFAAQFVAFFSWTKFGQVLAVLGADFLKDIGLTGPMLFFAFILMCG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH YINLMIGSASAQWAVTAPIFVPMLMLVGYAPEVIQAAYRIGDSVTNIITPMMSYFGLILA HHHHHHCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VATRYMKNLGIGTLIATMLPYSVVFMVGWSLLFYVWVFVLGLPVGPGAATYYTP HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9829935; 9097039; 9278503; 2825131; 7567469 [H]