| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
Click here to switch to the map view.
The map label for this gene is ppx [H]
Identifier: 147673098
GI number: 147673098
Start: 266031
End: 267533
Strand: Reverse
Name: ppx [H]
Synonym: VC0395_A0256
Alternate gene names: 147673098
Gene position: 267533-266031 (Counterclockwise)
Preceding gene: 147674904
Following gene: 147673880
Centisome position: 8.85
GC content: 47.5
Gene sequence:
>1503_bases ATGACAACAGTAGTCAGTAACGCAAGAGAAATCGCTGCCATTGATCTGGGTTCGAACAGTTTTCATATGGTGGTCGCCAA GGTGGTCGATCAAGATCTCCAATTGATTAGCCGCCATAAGCAGCGTGTTCGTCTTGCTGCGGGCTTGGATGAACAAAAAA ATCTCGATGAAGAGTCGATCCAACGTGGCTTAGAGTGTTTGGCGATGTTCGCAGAACGATTGCAAGGCTTTGAGCCACGT AATGTCCGTATTGCTGCAACCCACACTCTGCGCCAAGCCAGAAATGCCAATCTGTTTATTCAACGCGCTCTCGACGTGTT GCCTTTTCCAATTGAAATCATTCCGGGCTCTGAAGAAGCCCGGTTGATTTATCTGGGGGTTGCCCATACCCAACCCCAAG CGGATTCTATGCTGGTAGTGGATATTGGCGGCGGCAGCACGGAAATGATCATCGGCAAAGGCTTTGAAGCAGAACTGCTC AACAGTAAGCAGATGGGCTGCGTCAACTTTACCGAGCGTTACTTTGCCAACGGCAAGCTATCACGTAAAAACTTTGCCCA AGCGATTGTCGCCAGTGAGCAAAAATTAGAATCCATTGCCAGCAAATACCGTAAGAAAGGTTGGCAAATGGCGTTTGGTT CTTCCGGTACCATCAAAGCGATTCATGAAGTGTTAATCGGGCAAGGTCATGAAGATGGACTCATCACCTTTGAGCGCCTG AGCAAGTTAATTGAAAAACTCTGCGAATGGGACAGCATTGATGATTTACAACTGCCCGGCTTAACCGATGATCGAAAACC CGTGTTTGCGGCGGGCGTTGCCATTCTTTCCGCGATCTTTCATGGTTTAAACATCAAAGAGATGCTTTTTTCGGATGGTG CTTTGCGCGAAGGTCTGCTGTATGAGATGGAAGATCGCTTCAAGTATTCCGATATCCGTTTACGCACGACGGAAAATCTG GCCGCCAAACATCTGGTCGATTTAGAGCATGCAGCCAAAGTCAAAGGTCACGCGCGTGAATTCTTGGCGCAAGTCGCCAA TGAGTTGGGATTACCAGAAGGCAGTGAGCTGTGTGACCTACTCGAATGGGGCGCTCTGCTACATGAAGTGGGGCTGAGCA TTAACTTACAAGGTTTTCATCGTCACTCCGCGTATATTTTGCGTCATAACAACATGGCAGGTTTCAACAGCGAACAACAA CTCGTGCTCTCCAATTTGGCACGTTTCCAACGTAAATCGCTGAAATTGAATGAGCTGGATGACTTTAGTCTGTTTAAGAA AAAACACATTATTGGCTTAATTCGAGTCCTACGACTGGCGATTGTGGTTAATAGGCAACGCAACGACGACCCTTTACCAC CATTGACCCTATCCGCCAAAGATGATGAGTGGCGATTGGAGTGTGAACAGCCAGATTGGCTGGAAAACAATAAGTTGTTG CATGCTGACTTACAAACAGAGCAAGAATACTGGCGTGAAGTCGGCTGGCAACTGCTGTTTTAA
Upstream 100 bases:
>100_bases CGCGGTAATCGCAGAAAAGTACGCTCTCAGATTGCCATTTACGACTATCTTAAGAATGTCGAGAAGCAGACTCGTAAAGC AAAAGGGCAACAAGAAACGA
Downstream 100 bases:
>100_bases GCCAGCCTACTCACTGCAATTCGATGAAAAACGCCCAACTCAAGTTGGGCGTTTTTCATTTCATCACTCAGTCGATGATG GGCTTAACGCCAACTTTGGC
Product: exopolyphosphatase
Products: NA
Alternate protein names: ExopolyPase; Metaphosphatase [H]
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MTTVVSNAREIAAIDLGSNSFHMVVAKVVDQDLQLISRHKQRVRLAAGLDEQKNLDEESIQRGLECLAMFAERLQGFEPR NVRIAATHTLRQARNANLFIQRALDVLPFPIEIIPGSEEARLIYLGVAHTQPQADSMLVVDIGGGSTEMIIGKGFEAELL NSKQMGCVNFTERYFANGKLSRKNFAQAIVASEQKLESIASKYRKKGWQMAFGSSGTIKAIHEVLIGQGHEDGLITFERL SKLIEKLCEWDSIDDLQLPGLTDDRKPVFAAGVAILSAIFHGLNIKEMLFSDGALREGLLYEMEDRFKYSDIRLRTTENL AAKHLVDLEHAAKVKGHAREFLAQVANELGLPEGSELCDLLEWGALLHEVGLSINLQGFHRHSAYILRHNNMAGFNSEQQ LVLSNLARFQRKSLKLNELDDFSLFKKKHIIGLIRVLRLAIVVNRQRNDDPLPPLTLSAKDDEWRLECEQPDWLENNKLL HADLQTEQEYWREVGWQLLF
Sequences:
>Translated_500_residues MTTVVSNAREIAAIDLGSNSFHMVVAKVVDQDLQLISRHKQRVRLAAGLDEQKNLDEESIQRGLECLAMFAERLQGFEPR NVRIAATHTLRQARNANLFIQRALDVLPFPIEIIPGSEEARLIYLGVAHTQPQADSMLVVDIGGGSTEMIIGKGFEAELL NSKQMGCVNFTERYFANGKLSRKNFAQAIVASEQKLESIASKYRKKGWQMAFGSSGTIKAIHEVLIGQGHEDGLITFERL SKLIEKLCEWDSIDDLQLPGLTDDRKPVFAAGVAILSAIFHGLNIKEMLFSDGALREGLLYEMEDRFKYSDIRLRTTENL AAKHLVDLEHAAKVKGHAREFLAQVANELGLPEGSELCDLLEWGALLHEVGLSINLQGFHRHSAYILRHNNMAGFNSEQQ LVLSNLARFQRKSLKLNELDDFSLFKKKHIIGLIRVLRLAIVVNRQRNDDPLPPLTLSAKDDEWRLECEQPDWLENNKLL HADLQTEQEYWREVGWQLLF >Mature_499_residues TTVVSNAREIAAIDLGSNSFHMVVAKVVDQDLQLISRHKQRVRLAAGLDEQKNLDEESIQRGLECLAMFAERLQGFEPRN VRIAATHTLRQARNANLFIQRALDVLPFPIEIIPGSEEARLIYLGVAHTQPQADSMLVVDIGGGSTEMIIGKGFEAELLN SKQMGCVNFTERYFANGKLSRKNFAQAIVASEQKLESIASKYRKKGWQMAFGSSGTIKAIHEVLIGQGHEDGLITFERLS KLIEKLCEWDSIDDLQLPGLTDDRKPVFAAGVAILSAIFHGLNIKEMLFSDGALREGLLYEMEDRFKYSDIRLRTTENLA AKHLVDLEHAAKVKGHAREFLAQVANELGLPEGSELCDLLEWGALLHEVGLSINLQGFHRHSAYILRHNNMAGFNSEQQL VLSNLARFQRKSLKLNELDDFSLFKKKHIIGLIRVLRLAIVVNRQRNDDPLPPLTLSAKDDEWRLECEQPDWLENNKLLH ADLQTEQEYWREVGWQLLF
Specific function: Degradation of inorganic polyphosphates. Orthophosphate is released progressively from the ends of polyphosphate [H]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=492, Percent_Identity=50.8130081300813, Blast_Score=494, Evalue=1e-141, Organism=Escherichia coli, GI48994966, Length=493, Percent_Identity=41.1764705882353, Blast_Score=355, Evalue=3e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022371 - InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: =3.6.1.11 [H]
Molecular weight: Translated: 56521; Mature: 56389
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVVSNAREIAAIDLGSNSFHMVVAKVVDQDLQLISRHKQRVRLAAGLDEQKNLDEESI CCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHH QRGLECLAMFAERLQGFEPRNVRIAATHTLRQARNANLFIQRALDVLPFPIEIIPGSEEA HHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCC RLIYLGVAHTQPQADSMLVVDIGGGSTEMIIGKGFEAELLNSKQMGCVNFTERYFANGKL EEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCHHHCCCCCCCCCCHHHHHHCCCCC SRKNFAQAIVASEQKLESIASKYRKKGWQMAFGSSGTIKAIHEVLIGQGHEDGLITFERL CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCEEHHHH SKLIEKLCEWDSIDDLQLPGLTDDRKPVFAAGVAILSAIFHGLNIKEMLFSDGALREGLL HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHCCCH YEMEDRFKYSDIRLRTTENLAAKHLVDLEHAAKVKGHAREFLAQVANELGLPEGSELCDL HHHHHCCEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LEWGALLHEVGLSINLQGFHRHSAYILRHNNMAGFNSEQQLVLSNLARFQRKSLKLNELD HHHHHHHHHHCCEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC DFSLFKKKHIIGLIRVLRLAIVVNRQRNDDPLPPLTLSAKDDEWRLECEQPDWLENNKLL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCEE HADLQTEQEYWREVGWQLLF EECCHHHHHHHHHHCCEECC >Mature Secondary Structure TTVVSNAREIAAIDLGSNSFHMVVAKVVDQDLQLISRHKQRVRLAAGLDEQKNLDEESI CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHH QRGLECLAMFAERLQGFEPRNVRIAATHTLRQARNANLFIQRALDVLPFPIEIIPGSEEA HHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHCCCCHHHHHHHHHCCCCEEEECCCCCC RLIYLGVAHTQPQADSMLVVDIGGGSTEMIIGKGFEAELLNSKQMGCVNFTERYFANGKL EEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCHHHCCCCCCCCCCHHHHHHCCCCC SRKNFAQAIVASEQKLESIASKYRKKGWQMAFGSSGTIKAIHEVLIGQGHEDGLITFERL CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCEEHHHH SKLIEKLCEWDSIDDLQLPGLTDDRKPVFAAGVAILSAIFHGLNIKEMLFSDGALREGLL HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHCCCH YEMEDRFKYSDIRLRTTENLAAKHLVDLEHAAKVKGHAREFLAQVANELGLPEGSELCDL HHHHHCCEECCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LEWGALLHEVGLSINLQGFHRHSAYILRHNNMAGFNSEQQLVLSNLARFQRKSLKLNELD HHHHHHHHHHCCEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC DFSLFKKKHIIGLIRVLRLAIVVNRQRNDDPLPPLTLSAKDDEWRLECEQPDWLENNKLL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEECCCCCCCCCCCEE HADLQTEQEYWREVGWQLLF EECCHHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]