Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

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The map label for this gene is ybaN [H]

Identifier: 147673072

GI number: 147673072

Start: 612320

End: 612718

Strand: Direct

Name: ybaN [H]

Synonym: VC0395_A0570

Alternate gene names: 147673072

Gene position: 612320-612718 (Clockwise)

Preceding gene: 147674867

Following gene: 147673655

Centisome position: 20.25

GC content: 45.36

Gene sequence:

>399_bases
ATGCGTTCATCCTTACCACGTTTTTTGTTCAGTGTTATTGGAATAACCAGTCTATGCCTAGGGATACTGGGCATATTTCT
TCCTCTTCTGCCCACCACCCCCTTTATCTTACTGTCTAGTGCTTGTTTTTTACGCAGCAGTCCTCGGTTCTATCGCTGGT
TGAATCAACATGCGACATTTGGCCCTATGATTCAAAACTGGCAACAACATGGCGCGGTCAGTAAAGTGGTGAAAAAGCGT
GCCACACTCTTTATCGTGCTGAGTTTTGCCTTTTCGATCTGGATGGTTCCTTGGCTGTGGCTCAAGGTTGCGCTGTTTAT
CTGGCTTGTGCTTTTGATCACTTGGTTTATCCGTTTACCAACCCATGAGCTGGTTGCTAACCAACAAGAAAATCACTAG

Upstream 100 bases:

>100_bases
ATATCTATTACTTTCTAGGCGTGGTTGCAGTCCTGCTGATCCCGACTCTGCCTGCGACACTGACTTGGATTCGTGTATTT
AACGGGTACGCTGGATTTTA

Downstream 100 bases:

>100_bases
CATTAGCGGGAAGTGTGCCCACTCTTCGAGTGGGCTTTGTTTTTTCAGTGCTGTCGTTCCCTTGTGGCAGACGGCTCCGA
AATTGTTCTGTCATCACCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MRSSLPRFLFSVIGITSLCLGILGIFLPLLPTTPFILLSSACFLRSSPRFYRWLNQHATFGPMIQNWQQHGAVSKVVKKR
ATLFIVLSFAFSIWMVPWLWLKVALFIWLVLLITWFIRLPTHELVANQQENH

Sequences:

>Translated_132_residues
MRSSLPRFLFSVIGITSLCLGILGIFLPLLPTTPFILLSSACFLRSSPRFYRWLNQHATFGPMIQNWQQHGAVSKVVKKR
ATLFIVLSFAFSIWMVPWLWLKVALFIWLVLLITWFIRLPTHELVANQQENH
>Mature_132_residues
MRSSLPRFLFSVIGITSLCLGILGIFLPLLPTTPFILLSSACFLRSSPRFYRWLNQHATFGPMIQNWQQHGAVSKVVKKR
ATLFIVLSFAFSIWMVPWLWLKVALFIWLVLLITWFIRLPTHELVANQQENH

Specific function: Unknown

COG id: COG2832

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786674, Length=126, Percent_Identity=43.6507936507937, Blast_Score=105, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007401 [H]

Pfam domain/function: PF04304 DUF454 [H]

EC number: NA

Molecular weight: Translated: 15341; Mature: 15341

Theoretical pI: Translated: 11.87; Mature: 11.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSLPRFLFSVIGITSLCLGILGIFLPLLPTTPFILLSSACFLRSSPRFYRWLNQHATF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCC
GPMIQNWQQHGAVSKVVKKRATLFIVLSFAFSIWMVPWLWLKVALFIWLVLLITWFIRLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
THELVANQQENH
HHHHHHCCCCCC
>Mature Secondary Structure
MRSSLPRFLFSVIGITSLCLGILGIFLPLLPTTPFILLSSACFLRSSPRFYRWLNQHATF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCC
GPMIQNWQQHGAVSKVVKKRATLFIVLSFAFSIWMVPWLWLKVALFIWLVLLITWFIRLP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
THELVANQQENH
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]