| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is aroC [H]
Identifier: 161353770
GI number: 161353770
Start: 2288434
End: 2289519
Strand: Direct
Name: aroC [H]
Synonym: BRADO2153
Alternate gene names: 161353770
Gene position: 2288434-2289519 (Clockwise)
Preceding gene: 146339192
Following gene: 146339194
Centisome position: 30.69
GC content: 69.24
Gene sequence:
>1086_bases ATGTCCTTCAACACCTTCGGCCACATGTTCCGCGTCACCACCTTCGGCGAGAGCCATGGCGTGGCCATCGGCTGCGTGGT CGACGGCTGCCCGCCGCGGATTCCGCTGGAGGCGGCGGAGATCCAGACCGATCTCGACCGCCGCCGGCCGGGCCAGTCCC GCTTCACCACCCAGCGCCAGGAGCCGGACCAGGTGAAGATCCTGTCCGGCGTGATGGCCGATCCCGACACGGGCGCGCAG GTCACCACGGGCACGCCGATCGCGCTGCTCATCGAGAACACCGACCAGCGCTCCAAGGACTATTCCGAGATCAAGGACAA GTTTCGCCCGGGCCATGCCGACTTCACCTATGAGGCGAAGTACGGCCTGCGCGACTATCGCGGCGGTGGCCGCTCCTCGG CGCGCGAGACCGCCACGCGGGTCGCGGCCGGCGCGATCGCGCGCAAGATCATCGCCGGCGTAAAGGTGCGTGGCGCGCTG GTGCAGATGGGGCCGCACAAGATCGACCGTGACAAGTGGGACTGGGACGAGATCGCGCGCAACCCGTTCTTCTGTCCCGA CAAGGACAAGGCGGCGTTCTTCGAGGACTATCTCGATGGCATCAGGAAGTCAGGCTCCTCGATCGGCGCGGTGCTGGAGA TCACGGCCGAAGGCGTGCCTGCCGGGCTCGGCGCGCCGCTCTACGGCAAGCTGGACGCCGACCTCGCCGCGGCGATGATG AGCATCAACGCCGTGAAGGGCGTCGAGATCGGCGCCGGCTTCGGCGCGGCGGAATTGACCGGCGAGGCGAATGCCGACGA GATGCGCTCGGCCAACGACGGCACGCGCTTCCTGTCCAACCATGCCGGCGGCATCCTCGGCGGCATCGCCACGGGGCAGC CGATCGTGGTGCGCTTCGCGGTCAAGCCGACCTCGTCGATCCTCACCCCGCGCCAGACCGTCGACCGCGCCGGCCATGAG ACGGAGATCCTGACCAAGGGCCGCCACGACCCCTGCGTCGGCATCCGCGCGGTGCCGGTCGGCGAGGCGATGATGGCCTG CGTGCTCGCCGACCACCTGCTGCGCCATCGCGGCCAGGTGGGGTAG
Upstream 100 bases:
>100_bases CGGAGCGCCTCGTGAGCGGCGAACCCGGAATCTCGAGAGTCCGGGTCTGGTCCTTCAGACCATTCCGGGAATGACGGTTT TCTGATTGGGTGATCAGTCG
Downstream 100 bases:
>100_bases GGAAGGACGGCGTTTGCGTCACCGTCGCAAAAGCGAGGCCCGATGTCCGATATCAATTCCGCCCGTCTGCAGGCCCTGAT CGACTGGATGATGGACGGCG
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase [H]
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSFNTFGHMFRVTTFGESHGVAIGCVVDGCPPRIPLEAAEIQTDLDRRRPGQSRFTTQRQEPDQVKILSGVMADPDTGAQ VTTGTPIALLIENTDQRSKDYSEIKDKFRPGHADFTYEAKYGLRDYRGGGRSSARETATRVAAGAIARKIIAGVKVRGAL VQMGPHKIDRDKWDWDEIARNPFFCPDKDKAAFFEDYLDGIRKSGSSIGAVLEITAEGVPAGLGAPLYGKLDADLAAAMM SINAVKGVEIGAGFGAAELTGEANADEMRSANDGTRFLSNHAGGILGGIATGQPIVVRFAVKPTSSILTPRQTVDRAGHE TEILTKGRHDPCVGIRAVPVGEAMMACVLADHLLRHRGQVG
Sequences:
>Translated_361_residues MSFNTFGHMFRVTTFGESHGVAIGCVVDGCPPRIPLEAAEIQTDLDRRRPGQSRFTTQRQEPDQVKILSGVMADPDTGAQ VTTGTPIALLIENTDQRSKDYSEIKDKFRPGHADFTYEAKYGLRDYRGGGRSSARETATRVAAGAIARKIIAGVKVRGAL VQMGPHKIDRDKWDWDEIARNPFFCPDKDKAAFFEDYLDGIRKSGSSIGAVLEITAEGVPAGLGAPLYGKLDADLAAAMM SINAVKGVEIGAGFGAAELTGEANADEMRSANDGTRFLSNHAGGILGGIATGQPIVVRFAVKPTSSILTPRQTVDRAGHE TEILTKGRHDPCVGIRAVPVGEAMMACVLADHLLRHRGQVG >Mature_360_residues SFNTFGHMFRVTTFGESHGVAIGCVVDGCPPRIPLEAAEIQTDLDRRRPGQSRFTTQRQEPDQVKILSGVMADPDTGAQV TTGTPIALLIENTDQRSKDYSEIKDKFRPGHADFTYEAKYGLRDYRGGGRSSARETATRVAAGAIARKIIAGVKVRGALV QMGPHKIDRDKWDWDEIARNPFFCPDKDKAAFFEDYLDGIRKSGSSIGAVLEITAEGVPAGLGAPLYGKLDADLAAAMMS INAVKGVEIGAGFGAAELTGEANADEMRSANDGTRFLSNHAGGILGGIATGQPIVVRFAVKPTSSILTPRQTVDRAGHET EILTKGRHDPCVGIRAVPVGEAMMACVLADHLLRHRGQVG
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1788669, Length=362, Percent_Identity=64.0883977900553, Blast_Score=440, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6321290, Length=375, Percent_Identity=43.4666666666667, Blast_Score=282, Evalue=5e-77,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000453 - InterPro: IPR020541 [H]
Pfam domain/function: PF01264 Chorismate_synt [H]
EC number: =4.2.3.5 [H]
Molecular weight: Translated: 38645; Mature: 38514
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1 ; PS00788 CHORISMATE_SYNTHASE_2 ; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFNTFGHMFRVTTFGESHGVAIGCVVDGCPPRIPLEAAEIQTDLDRRRPGQSRFTTQRQ CCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC EPDQVKILSGVMADPDTGAQVTTGTPIALLIENTDQRSKDYSEIKDKFRPGHADFTYEAK CCCHHHHHHHHCCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEC YGLRDYRGGGRSSARETATRVAAGAIARKIIAGVKVRGALVQMGPHKIDRDKWDWDEIAR CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHC NPFFCPDKDKAAFFEDYLDGIRKSGSSIGAVLEITAEGVPAGLGAPLYGKLDADLAAAMM CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH SINAVKGVEIGAGFGAAELTGEANADEMRSANDGTRFLSNHAGGILGGIATGQPIVVRFA HHHHHCCEEECCCCCHHHCCCCCCHHHHHCCCCHHHHHHHCCCCEEECCCCCCCEEEEEE VKPTSSILTPRQTVDRAGHETEILTKGRHDPCVGIRAVPVGEAMMACVLADHLLRHRGQV ECCCHHHCCCHHHHHHCCCCCHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCC G C >Mature Secondary Structure SFNTFGHMFRVTTFGESHGVAIGCVVDGCPPRIPLEAAEIQTDLDRRRPGQSRFTTQRQ CCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC EPDQVKILSGVMADPDTGAQVTTGTPIALLIENTDQRSKDYSEIKDKFRPGHADFTYEAK CCCHHHHHHHHCCCCCCCCEEECCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEC YGLRDYRGGGRSSARETATRVAAGAIARKIIAGVKVRGALVQMGPHKIDRDKWDWDEIAR CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHC NPFFCPDKDKAAFFEDYLDGIRKSGSSIGAVLEITAEGVPAGLGAPLYGKLDADLAAAMM CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH SINAVKGVEIGAGFGAAELTGEANADEMRSANDGTRFLSNHAGGILGGIATGQPIVVRFA HHHHHCCEEECCCCCHHHCCCCCCHHHHHCCCCHHHHHHHCCCCEEECCCCCCCEEEEEE VKPTSSILTPRQTVDRAGHETEILTKGRHDPCVGIRAVPVGEAMMACVLADHLLRHRGQV ECCCHHHCCCHHHHHHCCCCCHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA