The gene/protein map for NC_009445 is currently unavailable.
Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is asmA [C]

Identifier: 146343725

GI number: 146343725

Start: 7260229

End: 7262328

Strand: Reverse

Name: asmA [C]

Synonym: BRADO6972

Alternate gene names: 146343725

Gene position: 7262328-7260229 (Counterclockwise)

Preceding gene: 146343728

Following gene: 146343724

Centisome position: 97.39

GC content: 69.24

Gene sequence:

>2100_bases
ATGAAAGCATTGAAGATTGCAGGCGGTTTGCTCGGCGCCGTCATCGTCGTGCTCGCGCTGGCGCTGGCCTTCGGGCTGCC
CGCGAGCTTCCTGACCGTGGCGATCCAGGACCGCGTGGAGCGCGACACCGGCTATCGCCTGAGCATCGCGGGGGGCGCCA
CGGTCAGCCTGTGGCCCTCCCTGCAGGTCACGCTGACCGACATCACGCTGCAGGACCCGAAAGACCGCGACGGCAACAAC
CGGCTGACGGTGTCCAGGCTGCAGGCCGACATGGCGCTGTCGAGCCTGTGGTCCGGCCGGCCCGACATCAGCGAGATCAG
CATCGAGAAGCCGACCCTCTACCTTCCCCTGCTGCGCGAGCGGCTGCGGGACAATGCGCCGCGCAGCCGCTCGTCTGCGA
AGCCGGAGAGCGTCCCAGCGGTCCGGATCGCCAGCGTCACCGTCACGGACGGCGCCGTGATCCTCTCCAACCCGCGCGAC
CGCGTCGAAAACCGGCTCGAGGGCCTCAGTGCGACGGGCTCGCTGAGCGGCGACAAGATCAAGATCAAAGGCAGCGCCCG
CGCCGGCGATCGTCCGGTGACGTTCGAGATCAATGCGGCCGCGCCGGCGATGCCGATCGATCGCCAGACGCTGCCGGTGG
ATTTCAGGATCGGCATGGAGAGCGCGTTCCGCGGCGTCCTCGCCGGGCGTGCCGATGTCAGGCTCAATGGCGCGCTGATC
ATGATCAACGGTCTCAGCGGCACGCTGGGCGATGGCGATTTCAACGGCTGGGCCTCGGTCGACCTCGCCAGCAAGCCGCT
GGTGAAGATCGACTTGGACGTGCGCCGCCTGGATCTTCCGGACTCTGCCGCGCCAGCCTCGTCGCGCGCCGCGGGGTGGA
GCACGGCGGCCATCGACCTGCGCGGCCTGAACTATCTCGACGCGCGCGTGAAGCTGTCGGCGACGGATATCGGCGTCTCC
GGCGCGCGCCTCGGCCCGCTGGATATGGAGGCCTCGCTGGCCGGCGGCCTGCTGAAGGCCACCGTCATCAATCTCGGCGT
CTACGACGGCCAGGCCGCCGGCGAGGCCGTGATCGATGCCTCGACCGGCAATCCAGCCTACGCGATGCACGGCGATATCG
TCGGCGTGCGGGCGCTGCCGCTGCTGCAAAACCTCGCCGGCTTCGACAAACTCGATGCGCGCATGCAGGGCAAGCTGGCG
CTGCGCTCGAGCGGCGCCAGCCAGCAGGCGATCATGAACAATCTGAGCGGCTCGACCTTCCTGCTGTTTCAGGACGGCGT
GATCCGCGGCATCAACGTCGCGCAGATGATCCGCTCGCTGACGACCAATCCGCTTTCGGGCTGGCAGGATTCGAAGGAGT
TGACCACCGACCTCACGCAGCTCTCGGCCTCATTCCAGATCGAGCGCGGCCAGGCGGCGACGACGGACCTCAATCTGGTC
GGACCGCTGGTCAAGGTCACCGGCGCCGGCACGGTCGATCTCGGCAATCGCGCGCTGGCGATGCGGGTCGAGCCGAAGCT
CGTGATGACGACCGAAGGGCAGGGCCGGACCTCCAACCCGGTCGGCCTCGGCATACCCGTGGTGATCGACGGCCCCTGGA
GCCAGCCGCGCTTCTATCCCGACATGGCCGGTATCCTCGACGATCCCGAGGGCACCTATGCCAAGCTCAAGCAGATGGGG
CAGGGGCTGTTCGGCAAGGATGGCGCAGGCCTCAACAACCTGCTCAACGGCATCGGCGGCCTGATCGGAAACGCGGCGCC
AAGCACCGGTCCAGTCCCGAACGCACCGACAGCGGCGCCGAATGCGCAGGCGCCGGCCGCCGGCCAGTCCGACCTGCTCG
GCGGCCAGCTTGGGGCCACCATCGGCAATCTGATCCAGCAGGGCCTGCAACAGGCCGCCCCGCCGCAGCCGAGGAGCCGC
GGCCGCACCGTGGTCCCGCCGGCCGGCATCGCGGCTGCGCCGCAGGCCGACCAACCTCCGCCGGCCGCCCCGGCCGACGC
CGGCCAGGGGGGCGCAACCGGCGAAGCGCCGGCCGGCGCGGACAGCGTCCCCGATAGCCAGCCCATGAACGACGTGCTGA
AGCGGATCTTCAATCGGTAA

Upstream 100 bases:

>100_bases
GGGCGATCTTCGTTCCGGGAAAAATTGAGATTGAACCGGGTCGGCGTTGCCGCATGCTAACCCGTGGAGACCGCTCGCCC
GCAGCGCTTGGGACATCGAT

Downstream 100 bases:

>100_bases
CATGAGGCAGGTGACGGTATTTCTGCGCCGTCCTCCTTCAAATGAGGGAGGAGATTGGTCACTGTTTGCGTCATCTTTGC
GCTTCGGGGGTCAGCGCATC

Product: putative AsmA-like protein

Products: NA

Alternate protein names: AsmA Protein; AsmA Family; AsmA-Like Protein; AsmA Protein Assembly Of Outer Membrane Proteins; Outer Membrane Protein Assembly Protein AsmA; Protein Involved In Assembly Of Outer Membrane Proteins; Protein Involved In Outer Membrane Biogenesis; Assembly Protein; Outer Membrane Assembly Protein; Periplasmic Protein; Secreted Protein

Number of amino acids: Translated: 699; Mature: 699

Protein sequence:

>699_residues
MKALKIAGGLLGAVIVVLALALAFGLPASFLTVAIQDRVERDTGYRLSIAGGATVSLWPSLQVTLTDITLQDPKDRDGNN
RLTVSRLQADMALSSLWSGRPDISEISIEKPTLYLPLLRERLRDNAPRSRSSAKPESVPAVRIASVTVTDGAVILSNPRD
RVENRLEGLSATGSLSGDKIKIKGSARAGDRPVTFEINAAAPAMPIDRQTLPVDFRIGMESAFRGVLAGRADVRLNGALI
MINGLSGTLGDGDFNGWASVDLASKPLVKIDLDVRRLDLPDSAAPASSRAAGWSTAAIDLRGLNYLDARVKLSATDIGVS
GARLGPLDMEASLAGGLLKATVINLGVYDGQAAGEAVIDASTGNPAYAMHGDIVGVRALPLLQNLAGFDKLDARMQGKLA
LRSSGASQQAIMNNLSGSTFLLFQDGVIRGINVAQMIRSLTTNPLSGWQDSKELTTDLTQLSASFQIERGQAATTDLNLV
GPLVKVTGAGTVDLGNRALAMRVEPKLVMTTEGQGRTSNPVGLGIPVVIDGPWSQPRFYPDMAGILDDPEGTYAKLKQMG
QGLFGKDGAGLNNLLNGIGGLIGNAAPSTGPVPNAPTAAPNAQAPAAGQSDLLGGQLGATIGNLIQQGLQQAAPPQPRSR
GRTVVPPAGIAAAPQADQPPPAAPADAGQGGATGEAPAGADSVPDSQPMNDVLKRIFNR

Sequences:

>Translated_699_residues
MKALKIAGGLLGAVIVVLALALAFGLPASFLTVAIQDRVERDTGYRLSIAGGATVSLWPSLQVTLTDITLQDPKDRDGNN
RLTVSRLQADMALSSLWSGRPDISEISIEKPTLYLPLLRERLRDNAPRSRSSAKPESVPAVRIASVTVTDGAVILSNPRD
RVENRLEGLSATGSLSGDKIKIKGSARAGDRPVTFEINAAAPAMPIDRQTLPVDFRIGMESAFRGVLAGRADVRLNGALI
MINGLSGTLGDGDFNGWASVDLASKPLVKIDLDVRRLDLPDSAAPASSRAAGWSTAAIDLRGLNYLDARVKLSATDIGVS
GARLGPLDMEASLAGGLLKATVINLGVYDGQAAGEAVIDASTGNPAYAMHGDIVGVRALPLLQNLAGFDKLDARMQGKLA
LRSSGASQQAIMNNLSGSTFLLFQDGVIRGINVAQMIRSLTTNPLSGWQDSKELTTDLTQLSASFQIERGQAATTDLNLV
GPLVKVTGAGTVDLGNRALAMRVEPKLVMTTEGQGRTSNPVGLGIPVVIDGPWSQPRFYPDMAGILDDPEGTYAKLKQMG
QGLFGKDGAGLNNLLNGIGGLIGNAAPSTGPVPNAPTAAPNAQAPAAGQSDLLGGQLGATIGNLIQQGLQQAAPPQPRSR
GRTVVPPAGIAAAPQADQPPPAAPADAGQGGATGEAPAGADSVPDSQPMNDVLKRIFNR
>Mature_699_residues
MKALKIAGGLLGAVIVVLALALAFGLPASFLTVAIQDRVERDTGYRLSIAGGATVSLWPSLQVTLTDITLQDPKDRDGNN
RLTVSRLQADMALSSLWSGRPDISEISIEKPTLYLPLLRERLRDNAPRSRSSAKPESVPAVRIASVTVTDGAVILSNPRD
RVENRLEGLSATGSLSGDKIKIKGSARAGDRPVTFEINAAAPAMPIDRQTLPVDFRIGMESAFRGVLAGRADVRLNGALI
MINGLSGTLGDGDFNGWASVDLASKPLVKIDLDVRRLDLPDSAAPASSRAAGWSTAAIDLRGLNYLDARVKLSATDIGVS
GARLGPLDMEASLAGGLLKATVINLGVYDGQAAGEAVIDASTGNPAYAMHGDIVGVRALPLLQNLAGFDKLDARMQGKLA
LRSSGASQQAIMNNLSGSTFLLFQDGVIRGINVAQMIRSLTTNPLSGWQDSKELTTDLTQLSASFQIERGQAATTDLNLV
GPLVKVTGAGTVDLGNRALAMRVEPKLVMTTEGQGRTSNPVGLGIPVVIDGPWSQPRFYPDMAGILDDPEGTYAKLKQMG
QGLFGKDGAGLNNLLNGIGGLIGNAAPSTGPVPNAPTAAPNAQAPAAGQSDLLGGQLGATIGNLIQQGLQQAAPPQPRSR
GRTVVPPAGIAAAPQADQPPPAAPADAGQGGATGEAPAGADSVPDSQPMNDVLKRIFNR

Specific function: Involved In The Inhibition Of Assembly Of Mutant Ompf Proteins. In General, Could Be Involved In The Assembly Of Outer Membrane Proteins. [C]

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72390; Mature: 72390

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALKIAGGLLGAVIVVLALALAFGLPASFLTVAIQDRVERDTGYRLSIAGGATVSLWPS
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCC
LQVTLTDITLQDPKDRDGNNRLTVSRLQADMALSSLWSGRPDISEISIEKPTLYLPLLRE
EEEEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEHHHHHH
RLRDNAPRSRSSAKPESVPAVRIASVTVTDGAVILSNPRDRVENRLEGLSATGSLSGDKI
HHHCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEECCCHHHHHHHHHCCCCCCCCCCCEE
KIKGSARAGDRPVTFEINAAAPAMPIDRQTLPVDFRIGMESAFRGVLAGRADVRLNGALI
EEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCEEECCEEE
MINGLSGTLGDGDFNGWASVDLASKPLVKIDLDVRRLDLPDSAAPASSRAAGWSTAAIDL
EEECCCCCCCCCCCCCEEEEEECCCCEEEEECCEEEECCCCCCCCCCCCCCCCEEEEEEE
RGLNYLDARVKLSATDIGVSGARLGPLDMEASLAGGLLKATVINLGVYDGQAAGEAVIDA
CCCCEECCEEEEEEEECCCCCCCCCCCCCHHHHHCCHHEEEEEEEECCCCCCCCCEEEEC
STGNPAYAMHGDIVGVRALPLLQNLAGFDKLDARMQGKLALRSSGASQQAIMNNLSGSTF
CCCCCCEEECCCEEEHHHHHHHHHHCCCHHHHHHHHCEEEEECCCCHHHHHHHCCCCCEE
LLFQDGVIRGINVAQMIRSLTTNPLSGWQDSKELTTDLTQLSASFQIERGQAATTDLNLV
EEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCHHHH
GPLVKVTGAGTVDLGNRALAMRVEPKLVMTTEGQGRTSNPVGLGIPVVIDGPWSQPRFYP
CCEEEECCCCEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCC
DMAGILDDPEGTYAKLKQMGQGLFGKDGAGLNNLLNGIGGLIGNAAPSTGPVPNAPTAAP
CHHCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NAQAPAAGQSDLLGGQLGATIGNLIQQGLQQAAPPQPRSRGRTVVPPAGIAAAPQADQPP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCEECCCCCCCCCCCCCCCC
PAAPADAGQGGATGEAPAGADSVPDSQPMNDVLKRIFNR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKALKIAGGLLGAVIVVLALALAFGLPASFLTVAIQDRVERDTGYRLSIAGGATVSLWPS
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEECCCCEEEECCC
LQVTLTDITLQDPKDRDGNNRLTVSRLQADMALSSLWSGRPDISEISIEKPTLYLPLLRE
EEEEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCEECCCCEEEHHHHHH
RLRDNAPRSRSSAKPESVPAVRIASVTVTDGAVILSNPRDRVENRLEGLSATGSLSGDKI
HHHCCCCCCCCCCCCCCCCEEEEEEEEEECCEEEECCCHHHHHHHHHCCCCCCCCCCCEE
KIKGSARAGDRPVTFEINAAAPAMPIDRQTLPVDFRIGMESAFRGVLAGRADVRLNGALI
EEEECCCCCCCCEEEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCEEECCEEE
MINGLSGTLGDGDFNGWASVDLASKPLVKIDLDVRRLDLPDSAAPASSRAAGWSTAAIDL
EEECCCCCCCCCCCCCEEEEEECCCCEEEEECCEEEECCCCCCCCCCCCCCCCEEEEEEE
RGLNYLDARVKLSATDIGVSGARLGPLDMEASLAGGLLKATVINLGVYDGQAAGEAVIDA
CCCCEECCEEEEEEEECCCCCCCCCCCCCHHHHHCCHHEEEEEEEECCCCCCCCCEEEEC
STGNPAYAMHGDIVGVRALPLLQNLAGFDKLDARMQGKLALRSSGASQQAIMNNLSGSTF
CCCCCCEEECCCEEEHHHHHHHHHHCCCHHHHHHHHCEEEEECCCCHHHHHHHCCCCCEE
LLFQDGVIRGINVAQMIRSLTTNPLSGWQDSKELTTDLTQLSASFQIERGQAATTDLNLV
EEEECCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCHHHH
GPLVKVTGAGTVDLGNRALAMRVEPKLVMTTEGQGRTSNPVGLGIPVVIDGPWSQPRFYP
CCEEEECCCCEEECCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCC
DMAGILDDPEGTYAKLKQMGQGLFGKDGAGLNNLLNGIGGLIGNAAPSTGPVPNAPTAAP
CHHCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NAQAPAAGQSDLLGGQLGATIGNLIQQGLQQAAPPQPRSRGRTVVPPAGIAAAPQADQPP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCEECCCCCCCCCCCCCCCC
PAAPADAGQGGATGEAPAGADSVPDSQPMNDVLKRIFNR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA