| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is otsA [H]
Identifier: 146343706
GI number: 146343706
Start: 7235841
End: 7237172
Strand: Reverse
Name: otsA [H]
Synonym: BRADO6952
Alternate gene names: 146343706
Gene position: 7237172-7235841 (Counterclockwise)
Preceding gene: 146343707
Following gene: 146343699
Centisome position: 97.06
GC content: 65.17
Gene sequence:
>1332_bases GTGCGTGATGGTGCGCAGGCGGAGCCGATCGCGCAGATCGAACAGCTCGGCCAAGGCGCACTGGCGCTGCTGGACCTGCC CGCCGCGCATTACGCCGGCTACTACGAAGGCTTCGCCAATTCGGCGCTGTGGCCGGCGCTGCATTCGCGCAGCGATCTCA TCAGAGTCTCGCAAGACGACTACAATTCCTATCGCGAGGTCAATTCGTTCGTCGCCCGCGCTCTGCTCAAGTTCCAGAAG CAGGACACGCTGTTCTGGATTCAGGACTATCATTTCCTGTCGTTGGGCGCGGAGCTGCGGACGCTCGGCGTCAAGAGCCC GATCGGCTTCTTCCTGCACACGCCGTGGCCGGCGCGCAGCGTGATCGACAGCGTGCCGAATCACCGCGACCTCGTCACCG CGATGCTCGCTTACGATCTGATCGGTTTCCAGACCGAAGACGATCGGGAGAATTTCGCCGCCTGCGTGCGGGCCGATCTC GGTCTGCAGGTGCGCAACGGCGTCGTCACCTCGCGGCACGGCCGCACGCGACTTGCGGTGTTTCCGATCGGCATCGACGC CGACAAGTTCGCGCAGCAGGCGGCCAAGGCGGCGTCGCATCCGGACGTGTCGCGGCTGCGCCGGAGCCTGCATGGGGAGA AGCTCGCGATCGGCGTCGACCGGCTCGACTACTCCAAGGGCCTCGTCAACCGCATCAACGCGTTCGACCGGATGTGGAGT GTCCATCCGACCCTGCTGCGCGCGGCGTCGCTGCTGCAGATCGCGACGCCGTCGCGCGAATCCATCGAGGCTTATGGCAA TCTGCAGAGCGAGGTTGCGCGTCTCGTCAGCGAGGTCAACGGCCGCCACGGCGAGGTCGATTGGACGCCGATCCGCTATC TCAACAAAGGCTACGGCCAAGGCGTGCTCGCCGGTCTCTATCGCAGCGCGCAGGTCGGTGTCGTCACGCCGCTGCATGAC GGCATGAACCTCGTTGCCAAGGAATATGTCGCGGCGCAAAGCCCGGTCGATCCCGGCGTGCTGGTGCTGTCGAAATTCGC CGGCGCCGCCAATGAACTCGACGCGGCACTGCTGGTCAACCCGCACGATATCGACGGCATGGCGCGTACGATCGCGATGG CACTGTCGATGCCGCTGAATGAGCGGCGCATGCGTCACCAGATCCTGATGACGAAGCTGCGCCGCCATTCGATCCAGCAA TGGTTCGCGGACTTCCTCGATGCGCTGCAGGACGACGGCGCCCACGAGCCGGTCGAGGTCGAACCCCTGCCTGCGGCGTC GGCGGGATTGCTCGGCAGCCGCTTCATGTCGTCGACCGCCCGTTATCACTGA
Upstream 100 bases:
>100_bases GCGTGGCAAGGCCAACGAGCCAATGACCGGCGGACTCGCGGCAGCCCTGCTGCCCGTTGTTGAGAATTCCGGAGCAGTTT GGGTGGGTTCCTCGGGCCGT
Downstream 100 bases:
>100_bases GGCCAGGACGGGCCGCGGAATGGCAGGTCGGCCCGGCGCGATCGGCTCAATGGCAATACGACACGCCGTCCAGCACCGCG CAGCGCAGCTTGTTCGGCGA
Product: trehalose-6-phosphate synthase
Products: NA
Alternate protein names: Osmoregulatory trehalose synthesis protein A; Trehalose-6-phosphate synthase; UDP-glucose-glucosephosphate glucosyltransferase [H]
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MRDGAQAEPIAQIEQLGQGALALLDLPAAHYAGYYEGFANSALWPALHSRSDLIRVSQDDYNSYREVNSFVARALLKFQK QDTLFWIQDYHFLSLGAELRTLGVKSPIGFFLHTPWPARSVIDSVPNHRDLVTAMLAYDLIGFQTEDDRENFAACVRADL GLQVRNGVVTSRHGRTRLAVFPIGIDADKFAQQAAKAASHPDVSRLRRSLHGEKLAIGVDRLDYSKGLVNRINAFDRMWS VHPTLLRAASLLQIATPSRESIEAYGNLQSEVARLVSEVNGRHGEVDWTPIRYLNKGYGQGVLAGLYRSAQVGVVTPLHD GMNLVAKEYVAAQSPVDPGVLVLSKFAGAANELDAALLVNPHDIDGMARTIAMALSMPLNERRMRHQILMTKLRRHSIQQ WFADFLDALQDDGAHEPVEVEPLPAASAGLLGSRFMSSTARYH
Sequences:
>Translated_443_residues MRDGAQAEPIAQIEQLGQGALALLDLPAAHYAGYYEGFANSALWPALHSRSDLIRVSQDDYNSYREVNSFVARALLKFQK QDTLFWIQDYHFLSLGAELRTLGVKSPIGFFLHTPWPARSVIDSVPNHRDLVTAMLAYDLIGFQTEDDRENFAACVRADL GLQVRNGVVTSRHGRTRLAVFPIGIDADKFAQQAAKAASHPDVSRLRRSLHGEKLAIGVDRLDYSKGLVNRINAFDRMWS VHPTLLRAASLLQIATPSRESIEAYGNLQSEVARLVSEVNGRHGEVDWTPIRYLNKGYGQGVLAGLYRSAQVGVVTPLHD GMNLVAKEYVAAQSPVDPGVLVLSKFAGAANELDAALLVNPHDIDGMARTIAMALSMPLNERRMRHQILMTKLRRHSIQQ WFADFLDALQDDGAHEPVEVEPLPAASAGLLGSRFMSSTARYH >Mature_443_residues MRDGAQAEPIAQIEQLGQGALALLDLPAAHYAGYYEGFANSALWPALHSRSDLIRVSQDDYNSYREVNSFVARALLKFQK QDTLFWIQDYHFLSLGAELRTLGVKSPIGFFLHTPWPARSVIDSVPNHRDLVTAMLAYDLIGFQTEDDRENFAACVRADL GLQVRNGVVTSRHGRTRLAVFPIGIDADKFAQQAAKAASHPDVSRLRRSLHGEKLAIGVDRLDYSKGLVNRINAFDRMWS VHPTLLRAASLLQIATPSRESIEAYGNLQSEVARLVSEVNGRHGEVDWTPIRYLNKGYGQGVLAGLYRSAQVGVVTPLHD GMNLVAKEYVAAQSPVDPGVLVLSKFAGAANELDAALLVNPHDIDGMARTIAMALSMPLNERRMRHQILMTKLRRHSIQQ WFADFLDALQDDGAHEPVEVEPLPAASAGLLGSRFMSSTARYH
Specific function: Catalyzes the transfer of glucose from UDP-glucose to glucose-6-phosphate to form alpha,alpha-1,1 trehalose-6-phosphate [H]
COG id: COG0380
COG function: function code G; Trehalose-6-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 20 family [H]
Homologues:
Organism=Escherichia coli, GI1788206, Length=408, Percent_Identity=38.7254901960784, Blast_Score=298, Evalue=6e-82, Organism=Caenorhabditis elegans, GI115533558, Length=413, Percent_Identity=28.5714285714286, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI115533560, Length=413, Percent_Identity=28.5714285714286, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI71987012, Length=441, Percent_Identity=27.2108843537415, Blast_Score=151, Evalue=8e-37, Organism=Saccharomyces cerevisiae, GI6319602, Length=385, Percent_Identity=33.2467532467532, Blast_Score=229, Evalue=4e-61, Organism=Saccharomyces cerevisiae, GI6320279, Length=431, Percent_Identity=24.8259860788863, Blast_Score=156, Evalue=7e-39, Organism=Saccharomyces cerevisiae, GI6323537, Length=388, Percent_Identity=24.7422680412371, Blast_Score=138, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6323917, Length=387, Percent_Identity=24.8062015503876, Blast_Score=134, Evalue=4e-32, Organism=Drosophila melanogaster, GI19920676, Length=402, Percent_Identity=37.5621890547264, Blast_Score=252, Evalue=3e-67,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001830 - InterPro: IPR012766 [H]
Pfam domain/function: PF00982 Glyco_transf_20 [H]
EC number: =2.4.1.15 [H]
Molecular weight: Translated: 48968; Mature: 48968
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDGAQAEPIAQIEQLGQGALALLDLPAAHYAGYYEGFANSALWPALHSRSDLIRVSQDD CCCCCCCCHHHHHHHCCCCCEEEHCCCHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCHH YNSYREVNSFVARALLKFQKQDTLFWIQDYHFLSLGAELRTLGVKSPIGFFLHTPWPARS HHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCHHHHHHCCCCCCCCEEECCCCHHH VIDSVPNHRDLVTAMLAYDLIGFQTEDDRENFAACVRADLGLQVRNGVVTSRHGRTRLAV HHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEECCCEEECCCCCEEEEE FPIGIDADKFAQQAAKAASHPDVSRLRRSLHGEKLAIGVDRLDYSKGLVNRINAFDRMWS EEECCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH VHPTLLRAASLLQIATPSRESIEAYGNLQSEVARLVSEVNGRHGEVDWTPIRYLNKGYGQ CCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC GVLAGLYRSAQVGVVTPLHDGMNLVAKEYVAAQSPVDPGVLVLSKFAGAANELDAALLVN HHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEC PHDIDGMARTIAMALSMPLNERRMRHQILMTKLRRHSIQQWFADFLDALQDDGAHEPVEV CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEC EPLPAASAGLLGSRFMSSTARYH CCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRDGAQAEPIAQIEQLGQGALALLDLPAAHYAGYYEGFANSALWPALHSRSDLIRVSQDD CCCCCCCCHHHHHHHCCCCCEEEHCCCHHHHHHHHHHHCCCCHHHHHHCCCCEEEECCHH YNSYREVNSFVARALLKFQKQDTLFWIQDYHFLSLGAELRTLGVKSPIGFFLHTPWPARS HHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCHHHHHHCCCCCCCCEEECCCCHHH VIDSVPNHRDLVTAMLAYDLIGFQTEDDRENFAACVRADLGLQVRNGVVTSRHGRTRLAV HHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEECCCEEECCCCCEEEEE FPIGIDADKFAQQAAKAASHPDVSRLRRSLHGEKLAIGVDRLDYSKGLVNRINAFDRMWS EEECCCHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHH VHPTLLRAASLLQIATPSRESIEAYGNLQSEVARLVSEVNGRHGEVDWTPIRYLNKGYGQ CCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC GVLAGLYRSAQVGVVTPLHDGMNLVAKEYVAAQSPVDPGVLVLSKFAGAANELDAALLVN HHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEC PHDIDGMARTIAMALSMPLNERRMRHQILMTKLRRHSIQQWFADFLDALQDDGAHEPVEV CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEC EPLPAASAGLLGSRFMSSTARYH CCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]