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The map label for this gene is fmdA [H]

Identifier: 146343650

GI number: 146343650

Start: 7160019

End: 7161251

Strand: Reverse

Name: fmdA [H]

Synonym: BRADO6892

Alternate gene names: 146343650

Gene position: 7161251-7160019 (Counterclockwise)

Preceding gene: 146343651

Following gene: 146343649

Centisome position: 96.04

GC content: 64.64

Gene sequence:

>1233_bases
TTGATGCCTGACACACTGATCAAGGTCGATCTGACCAAGTCGGCCTACGAGAACGATAAGGTGCACAATCGCTGGCACCC
GGACATCCCGATGGTGGAGTGGGTCAACCCCGGTGACGACTTCATCATCGAGACCTATGACTGGACCGGCGGCTTCATCA
AGAACAACGACTCGGCCGACGACGTTCGCGACATCGACCTGTCGATCGTGCACTTCCTCTCGGGCCCGATCGGCGTCAAG
GGCGCCGAGCCCGGCGACCTCCTCGTCGTCGACCTGCTCGACGTCGGCCCGCTGAAGGAGAGCCTGTGGGGCTTCAACGG
CTTCTTCTCCAAGCAGAATGGCGGCGGCTTCCTGACCGACCACTTCCCGCTGGCGCAGAAGTCGATCTGGGACATCAAGG
GCCTCTACACCTCGTCGCGCCATGTGCCGGGCGTGAACTTCGCCGGACTGATCCATCCCGGCCTGATCGGCTGTCTGCCC
GATCCGAAGCTGCTCGCGACCTGGAACGAGCGCGAGACCGCGCTGATCGCGACCAACCCGACCCGCGTGCCGGGCCTCGC
CAACCCGCCGTTCGCGCCGACCGCCCATGCCGGCCAGGCCAAGGGCGACGTCAAGGCGAAGATCGGCGCCGAGGGCGCCC
GCACCGTGCCGCCGCGCGAGCATGGCGGCAATTGCGACATCAAGGACCTGTCGCGCGGCTCGAAGATCTACTTCCCGGTC
TACGTGCCCGGCGGCGGCCTCTCGATGGGCGACCTGCACTTCAGCCAGGGTGACGGCGAGATCACCTTCTGCGGCGCCAT
CGAGATGGCCGGCTGGCTGCACATCAAGGTCGACGTCATCAAGGACGGCGTCGCCAAGTACGGCATCAAGAACCCGATCT
TCAAGCCGTCGCCGATCACGCCGAACTATCGCGACTACCTGATCTTCGAGGGCATCTCGGTCGACGAGGCCGGCAAGCAG
CACTACCTCGACGTCCACATCGCCTATCGCCAGGCCTGTCTCAACGCCATCGAGTACCTGAAGAAGTTCGGCTACTCCGG
CGCCCAGGCCTATTCGATCCTCGGCACCGCGCCGGTGCAGGGCCACATCTCCGGCGTGGTCGACGTGCCCAACGCCTGCG
CCACGCTATGGCTGCCGACCGAGATCTTCGACTTCGACGTGATGCCGTCGGCGGCGGGGCCGATCAAGCACATCAAGGGC
GATATCCAGATGCCGATCTCGCCTGACAAATAA

Upstream 100 bases:

>100_bases
GATCGTCCGCGACGATCCGCGCGACCAGGTCGATGCCGCGCAGGTCTCGAAATATCTGTCCGTCTAACCACTCCGTCCAA
GCAAAGGTAAAGGGGAGCTC

Downstream 100 bases:

>100_bases
CGCTCTCCCTGTGCGACGGGGTGCGGGACGGCTGCGTATCTGGCCGCCCCGCATCTGCCGCGCCGAGGAGAGAGACGATG
TTGCGCAGGAGATGAGACAA

Product: formamidase

Products: NA

Alternate protein names: Formamide amidohydrolase [H]

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MMPDTLIKVDLTKSAYENDKVHNRWHPDIPMVEWVNPGDDFIIETYDWTGGFIKNNDSADDVRDIDLSIVHFLSGPIGVK
GAEPGDLLVVDLLDVGPLKESLWGFNGFFSKQNGGGFLTDHFPLAQKSIWDIKGLYTSSRHVPGVNFAGLIHPGLIGCLP
DPKLLATWNERETALIATNPTRVPGLANPPFAPTAHAGQAKGDVKAKIGAEGARTVPPREHGGNCDIKDLSRGSKIYFPV
YVPGGGLSMGDLHFSQGDGEITFCGAIEMAGWLHIKVDVIKDGVAKYGIKNPIFKPSPITPNYRDYLIFEGISVDEAGKQ
HYLDVHIAYRQACLNAIEYLKKFGYSGAQAYSILGTAPVQGHISGVVDVPNACATLWLPTEIFDFDVMPSAAGPIKHIKG
DIQMPISPDK

Sequences:

>Translated_410_residues
MMPDTLIKVDLTKSAYENDKVHNRWHPDIPMVEWVNPGDDFIIETYDWTGGFIKNNDSADDVRDIDLSIVHFLSGPIGVK
GAEPGDLLVVDLLDVGPLKESLWGFNGFFSKQNGGGFLTDHFPLAQKSIWDIKGLYTSSRHVPGVNFAGLIHPGLIGCLP
DPKLLATWNERETALIATNPTRVPGLANPPFAPTAHAGQAKGDVKAKIGAEGARTVPPREHGGNCDIKDLSRGSKIYFPV
YVPGGGLSMGDLHFSQGDGEITFCGAIEMAGWLHIKVDVIKDGVAKYGIKNPIFKPSPITPNYRDYLIFEGISVDEAGKQ
HYLDVHIAYRQACLNAIEYLKKFGYSGAQAYSILGTAPVQGHISGVVDVPNACATLWLPTEIFDFDVMPSAAGPIKHIKG
DIQMPISPDK
>Mature_410_residues
MMPDTLIKVDLTKSAYENDKVHNRWHPDIPMVEWVNPGDDFIIETYDWTGGFIKNNDSADDVRDIDLSIVHFLSGPIGVK
GAEPGDLLVVDLLDVGPLKESLWGFNGFFSKQNGGGFLTDHFPLAQKSIWDIKGLYTSSRHVPGVNFAGLIHPGLIGCLP
DPKLLATWNERETALIATNPTRVPGLANPPFAPTAHAGQAKGDVKAKIGAEGARTVPPREHGGNCDIKDLSRGSKIYFPV
YVPGGGLSMGDLHFSQGDGEITFCGAIEMAGWLHIKVDVIKDGVAKYGIKNPIFKPSPITPNYRDYLIFEGISVDEAGKQ
HYLDVHIAYRQACLNAIEYLKKFGYSGAQAYSILGTAPVQGHISGVVDVPNACATLWLPTEIFDFDVMPSAAGPIKHIKG
DIQMPISPDK

Specific function: Hydrolyzes formamide with the production of ammonia which can be used as a source of nitrogen for growth. Also acts, more slowly, on acetamide, propanamide and butanamide [H]

COG id: COG2421

COG function: function code C; Predicted acetamidase/formamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acetamidase/formamidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004304 [H]

Pfam domain/function: PF03069 FmdA_AmdA [H]

EC number: =3.5.1.49 [H]

Molecular weight: Translated: 44540; Mature: 44540

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPDTLIKVDLTKSAYENDKVHNRWHPDIPMVEWVNPGDDFIIETYDWTGGFIKNNDSAD
CCCCEEEEEEECHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEECCCCCC
DVRDIDLSIVHFLSGPIGVKGAEPGDLLVVDLLDVGPLKESLWGFNGFFSKQNGGGFLTD
CHHHHHHHEEEHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCEEECCCCCEEEEC
HFPLAQKSIWDIKGLYTSSRHVPGVNFAGLIHPGLIGCLPDPKLLATWNERETALIATNP
CCCCHHHHHHHHHCEEECCCCCCCCCCHHHHCCCEEECCCCCCEEEEECCCCEEEEEECC
TRVPGLANPPFAPTAHAGQAKGDVKAKIGAEGARTVPPREHGGNCDIKDLSRGSKIYFPV
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEE
YVPGGGLSMGDLHFSQGDGEITFCGAIEMAGWLHIKVDVIKDGVAKYGIKNPIFKPSPIT
EECCCCCCCCCEEEECCCCCEEEEEEEEECCEEEEEEEEECCCHHHCCCCCCCCCCCCCC
PNYRDYLIFEGISVDEAGKQHYLDVHIAYRQACLNAIEYLKKFGYSGAQAYSILGTAPVQ
CCCCCEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
GHISGVVDVPNACATLWLPTEIFDFDVMPSAAGPIKHIKGDIQMPISPDK
CCCEEEEECCCCCEEEEECHHHEEEECCCCCCCCHHHCCCCEECCCCCCC
>Mature Secondary Structure
MMPDTLIKVDLTKSAYENDKVHNRWHPDIPMVEWVNPGDDFIIETYDWTGGFIKNNDSAD
CCCCEEEEEEECHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCEEECCCCCC
DVRDIDLSIVHFLSGPIGVKGAEPGDLLVVDLLDVGPLKESLWGFNGFFSKQNGGGFLTD
CHHHHHHHEEEHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHCCCCCEEECCCCCEEEEC
HFPLAQKSIWDIKGLYTSSRHVPGVNFAGLIHPGLIGCLPDPKLLATWNERETALIATNP
CCCCHHHHHHHHHCEEECCCCCCCCCCHHHHCCCEEECCCCCCEEEEECCCCEEEEEECC
TRVPGLANPPFAPTAHAGQAKGDVKAKIGAEGARTVPPREHGGNCDIKDLSRGSKIYFPV
CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEE
YVPGGGLSMGDLHFSQGDGEITFCGAIEMAGWLHIKVDVIKDGVAKYGIKNPIFKPSPIT
EECCCCCCCCCEEEECCCCCEEEEEEEEECCEEEEEEEEECCCHHHCCCCCCCCCCCCCC
PNYRDYLIFEGISVDEAGKQHYLDVHIAYRQACLNAIEYLKKFGYSGAQAYSILGTAPVQ
CCCCCEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
GHISGVVDVPNACATLWLPTEIFDFDVMPSAAGPIKHIKGDIQMPISPDK
CCCEEEEECCCCCEEEEECHHHEEEECCCCCCCCHHHCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8841393 [H]