| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343607
Identifier: 146343607
GI number: 146343607
Start: 7108569
End: 7109246
Strand: Reverse
Name: 146343607
Synonym: BRADO6845
Alternate gene names: NA
Gene position: 7109246-7108569 (Counterclockwise)
Preceding gene: 146343616
Following gene: 146343605
Centisome position: 95.34
GC content: 68.29
Gene sequence:
>678_bases ATGGCGGAGTATGTCGTGGAGTTCGGCCGGGACGGCCGGCCGGTGGAACCGGACGGACGGTTGGACGCCGCCGCGTTCCA CCGCAACCATCAACCGATCTGGGCCGTGCTGGCGCGATGGCTGGAGGGCCGCGCGGGCGGCGTGCTGGAAGCCGGCAGCG GCACCGGCCAGCACATCGTTCATTTCGCCGCGCAGCGTCCCGATCTCATGTGGTGGCCGAGCGACTTCAATGCCAACCAT CTCGCCAGCATCGCGGCATGGCGTAAGCACTCGCGACTGTCCAACATCCGCGATGCCCAACGTATCGACCTCTCAGATGC CGGCTGGGTCGCCGGGTTCAAGGCGGCCGGCGGGCCGGCGCAACTGACCGCGATCTTCTGCGCCAACGTCATCCACATCG CCCCGTGGTCGGTGGCGGGGGGCCTGTTCGCCGGCGCAGGCGAGGTGCTCTCGCCGGACGGGCTGCTCGTGCTCTACGGC CCGTTCAAGCGCGACGGCAAGCACACCGCGGTCAGCAACGCCGTGTTCGACGCGTCCCTGCGCGAGGGCAATCCCGAGTG GGGCGTCCGCGACATCACGGACCTCGAAGCCCTCGCCGTGCGCAATGGCCTGACCTTGCGCGAAACCGTGGAAATGCCTG CCAACAACATGATCCTGGTGTTCGCAAGGGCAGCCTGA
Upstream 100 bases:
>100_bases GGGGGTGCAAAGCATAAAGACCATCGGCTGACAATGCGCGTATGGTGGCCGGCGCAACGCGGTTAACGAGGCCGTCCAGC GGGCGGCCGGGAGAATTGGA
Downstream 100 bases:
>100_bases GTTGCCGACGGCGCAGCGCCGCCCATGGTCGTCGTCCCGGCGAACGCCGCAACCCATAACCATAGGGAGCAGTCGTGACG CGAGATCGGCGTGACGTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MAEYVVEFGRDGRPVEPDGRLDAAAFHRNHQPIWAVLARWLEGRAGGVLEAGSGTGQHIVHFAAQRPDLMWWPSDFNANH LASIAAWRKHSRLSNIRDAQRIDLSDAGWVAGFKAAGGPAQLTAIFCANVIHIAPWSVAGGLFAGAGEVLSPDGLLVLYG PFKRDGKHTAVSNAVFDASLREGNPEWGVRDITDLEALAVRNGLTLRETVEMPANNMILVFARAA
Sequences:
>Translated_225_residues MAEYVVEFGRDGRPVEPDGRLDAAAFHRNHQPIWAVLARWLEGRAGGVLEAGSGTGQHIVHFAAQRPDLMWWPSDFNANH LASIAAWRKHSRLSNIRDAQRIDLSDAGWVAGFKAAGGPAQLTAIFCANVIHIAPWSVAGGLFAGAGEVLSPDGLLVLYG PFKRDGKHTAVSNAVFDASLREGNPEWGVRDITDLEALAVRNGLTLRETVEMPANNMILVFARAA >Mature_224_residues AEYVVEFGRDGRPVEPDGRLDAAAFHRNHQPIWAVLARWLEGRAGGVLEAGSGTGQHIVHFAAQRPDLMWWPSDFNANHL ASIAAWRKHSRLSNIRDAQRIDLSDAGWVAGFKAAGGPAQLTAIFCANVIHIAPWSVAGGLFAGAGEVLSPDGLLVLYGP FKRDGKHTAVSNAVFDASLREGNPEWGVRDITDLEALAVRNGLTLRETVEMPANNMILVFARAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI93102387, Length=207, Percent_Identity=42.0289855072464, Blast_Score=145, Evalue=3e-35, Organism=Homo sapiens, GI93102391, Length=144, Percent_Identity=39.5833333333333, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI93102401, Length=119, Percent_Identity=38.655462184874, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71998087, Length=204, Percent_Identity=35.7843137254902, Blast_Score=126, Evalue=1e-29, Organism=Drosophila melanogaster, GI28574095, Length=199, Percent_Identity=38.1909547738693, Blast_Score=138, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24323; Mature: 24192
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEYVVEFGRDGRPVEPDGRLDAAAFHRNHQPIWAVLARWLEGRAGGVLEAGSGTGQHIV CCCCCEECCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHE HFAAQRPDLMWWPSDFNANHLASIAAWRKHSRLSNIRDAQRIDLSDAGWVAGFKAAGGPA EHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEECCCCCHH QLTAIFCANVIHIAPWSVAGGLFAGAGEVLSPDGLLVLYGPFKRDGKHTAVSNAVFDASL HHHHHHHHHHHHCCCHHHHCCHHCCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHCCHH REGNPEWGVRDITDLEALAVRNGLTLRETVEMPANNMILVFARAA HCCCCCCCCCCHHHHHHHHHHCCCEEEHHHCCCCCCEEEEEEECC >Mature Secondary Structure AEYVVEFGRDGRPVEPDGRLDAAAFHRNHQPIWAVLARWLEGRAGGVLEAGSGTGQHIV CCCCEECCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCCEEECCCCCCHHHE HFAAQRPDLMWWPSDFNANHLASIAAWRKHSRLSNIRDAQRIDLSDAGWVAGFKAAGGPA EHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEECCCCCHH QLTAIFCANVIHIAPWSVAGGLFAGAGEVLSPDGLLVLYGPFKRDGKHTAVSNAVFDASL HHHHHHHHHHHHCCCHHHHCCHHCCCCCEECCCCEEEEECCCCCCCCCHHHHHHHHCCHH REGNPEWGVRDITDLEALAVRNGLTLRETVEMPANNMILVFARAA HCCCCCCCCCCHHHHHHHHHHCCCEEEHHHCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA