| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is hemA [H]
Identifier: 146343443
GI number: 146343443
Start: 6932074
End: 6933303
Strand: Direct
Name: hemA [H]
Synonym: BRADO6672
Alternate gene names: 146343443
Gene position: 6932074-6933303 (Clockwise)
Preceding gene: 146343442
Following gene: 146343444
Centisome position: 92.97
GC content: 66.83
Gene sequence:
>1230_bases ATGGACTACAGCCAATATTTCAGTGCCGCTCTGGGTCGTCTGCATGACGAGCGCCGCTATCGGGTTTTCGCCGATCTCGA ACGCATCGCCGGCCGGTTCCCGCACGCCACCTGGCACTCGCCGAACGGTCCGCGCAACGTCGTGATCTGGTGCTCCAACG ACTATCTCGGCATGGGCCAGCACCCGAAGGTGGTCGGCGCAATGGTCGAGACCGCGACCCGCGTCGGCACCGGCGCCGGC GGCACCCGCAACATCGCCGGCACCCACCATCCCCTGGTGCAACTGGAAGCCGAGCTCGCCGATCTGCACGGCAAGGAAGC GGCGCTGCTGTTCACCTCCGGCTACGTCTCGAACCAGACCGGCATCGCCACGCTCGCCAAGCTGATCCCGGACTGCCTGA TCCTGTCGGATGCGCTCAATCACAATTCGATGATCGAGGGCGTGCGCCAGTCCGGCTGCGAGCGCCAGATCTGGCGCCAC AACGACCTTGCCCATCTCGAGCAGTTGCTGATCGCGGCCGGCCCGAGCCGGCCGAAGCTGATCGCCTGCGAGAGCCTGTA TTCGATGGACGGCGACGTCGCGCCGCTGGCCGCGATCTGCGATCTCGCCGAGCGCTACAATGCGATGACCTATGTCGACG AGGTGCATGCGGTCGGCATGTACGGCGCGCGAGGCGGCGGCATCGCCGAGCGCGACGGCGTCATGCACCGCATCGACATT CTCGAAGGCACGCTGGCGAAAGCGTTCGGCTGTCTCGGCGGCTACATCGCAGCCAAGGGCGAGATCATCGACGCCGTGCG CTCCTACGCGCCGGGTTTCATCTTCACGACGGCGCTGCCGCCGCCGATCTGCTCGGCCGCCACCGCCGCGATCAAGCACC TGAAATCGTCGAGCTGGGAGCGCGAGCGCCACCAGGACCGCGCTGCCCGCGTCAAGGCGATCCTCAACGCCGCTGGCCTG CCTGTCATGGACAACGACACCCACATCGTGCCGCTGTTCGTCGGCGATCCCGAGAAGTGCAAGCAGGCCTCCGACCTGCT GCTCGAAGAGCACGGCATCTACATCCAGCCGATCAACTACCCGACGGTCGCCAAGGGCACCGAGCGCCTGCGCATCACGC CCTCGCCCTATCACGACGACGGCCTGATCGACCGCCTGGCGGAGGCCCTGCTGCAGGTCTGGGAACGGCTGGGATTGGCG CTGCACAAGAAGCCGCTGGCGGCGGAGTAG
Upstream 100 bases:
>100_bases GACAGCCGCTCTGGAAACGCTCTAAGAAGGCCTTAAGCCCCCGTCGCTTAGAGGGTCCGCTCCAGGCGCTGCGCTGCAGC GCAGCACGTCAGGTTCCGTG
Downstream 100 bases:
>100_bases CCTTCGTAGCCCGGGTAAGCGCAGCGACACCCGGGTTCACCGAGACGGCACGTGATACCCCGGATATCGCTGCGCTCATC CGGGCTACGGCCCCTCCGCT
Product: 5-aminolevulinate synthase
Products: NA
Alternate protein names: 5-aminolevulinic acid synthase; Delta-ALA synthase; Delta-aminolevulinate synthase [H]
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MDYSQYFSAALGRLHDERRYRVFADLERIAGRFPHATWHSPNGPRNVVIWCSNDYLGMGQHPKVVGAMVETATRVGTGAG GTRNIAGTHHPLVQLEAELADLHGKEAALLFTSGYVSNQTGIATLAKLIPDCLILSDALNHNSMIEGVRQSGCERQIWRH NDLAHLEQLLIAAGPSRPKLIACESLYSMDGDVAPLAAICDLAERYNAMTYVDEVHAVGMYGARGGGIAERDGVMHRIDI LEGTLAKAFGCLGGYIAAKGEIIDAVRSYAPGFIFTTALPPPICSAATAAIKHLKSSSWERERHQDRAARVKAILNAAGL PVMDNDTHIVPLFVGDPEKCKQASDLLLEEHGIYIQPINYPTVAKGTERLRITPSPYHDDGLIDRLAEALLQVWERLGLA LHKKPLAAE
Sequences:
>Translated_409_residues MDYSQYFSAALGRLHDERRYRVFADLERIAGRFPHATWHSPNGPRNVVIWCSNDYLGMGQHPKVVGAMVETATRVGTGAG GTRNIAGTHHPLVQLEAELADLHGKEAALLFTSGYVSNQTGIATLAKLIPDCLILSDALNHNSMIEGVRQSGCERQIWRH NDLAHLEQLLIAAGPSRPKLIACESLYSMDGDVAPLAAICDLAERYNAMTYVDEVHAVGMYGARGGGIAERDGVMHRIDI LEGTLAKAFGCLGGYIAAKGEIIDAVRSYAPGFIFTTALPPPICSAATAAIKHLKSSSWERERHQDRAARVKAILNAAGL PVMDNDTHIVPLFVGDPEKCKQASDLLLEEHGIYIQPINYPTVAKGTERLRITPSPYHDDGLIDRLAEALLQVWERLGLA LHKKPLAAE >Mature_409_residues MDYSQYFSAALGRLHDERRYRVFADLERIAGRFPHATWHSPNGPRNVVIWCSNDYLGMGQHPKVVGAMVETATRVGTGAG GTRNIAGTHHPLVQLEAELADLHGKEAALLFTSGYVSNQTGIATLAKLIPDCLILSDALNHNSMIEGVRQSGCERQIWRH NDLAHLEQLLIAAGPSRPKLIACESLYSMDGDVAPLAAICDLAERYNAMTYVDEVHAVGMYGARGGGIAERDGVMHRIDI LEGTLAKAFGCLGGYIAAKGEIIDAVRSYAPGFIFTTALPPPICSAATAAIKHLKSSSWERERHQDRAARVKAILNAAGL PVMDNDTHIVPLFVGDPEKCKQASDLLLEEHGIYIQPINYPTVAKGTERLRITPSPYHDDGLIDRLAEALLQVWERLGLA LHKKPLAAE
Specific function: Unknown
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI83977442, Length=412, Percent_Identity=48.3009708737864, Blast_Score=410, Evalue=1e-114, Organism=Homo sapiens, GI83977440, Length=412, Percent_Identity=48.3009708737864, Blast_Score=410, Evalue=1e-114, Organism=Homo sapiens, GI83977444, Length=412, Percent_Identity=48.3009708737864, Blast_Score=409, Evalue=1e-114, Organism=Homo sapiens, GI4502025, Length=405, Percent_Identity=49.3827160493827, Blast_Score=393, Evalue=1e-109, Organism=Homo sapiens, GI40316939, Length=405, Percent_Identity=49.3827160493827, Blast_Score=393, Evalue=1e-109, Organism=Homo sapiens, GI7657118, Length=348, Percent_Identity=35.632183908046, Blast_Score=221, Evalue=8e-58, Organism=Homo sapiens, GI284448556, Length=348, Percent_Identity=35.632183908046, Blast_Score=221, Evalue=9e-58, Organism=Homo sapiens, GI119220554, Length=403, Percent_Identity=29.2803970223325, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI4758668, Length=403, Percent_Identity=29.2803970223325, Blast_Score=158, Evalue=1e-38, Organism=Homo sapiens, GI5454084, Length=256, Percent_Identity=26.5625, Blast_Score=105, Evalue=9e-23, Organism=Escherichia coli, GI1790046, Length=376, Percent_Identity=35.3723404255319, Blast_Score=213, Evalue=2e-56, Organism=Escherichia coli, GI1786993, Length=348, Percent_Identity=32.7586206896552, Blast_Score=164, Evalue=7e-42, Organism=Caenorhabditis elegans, GI71994529, Length=356, Percent_Identity=35.9550561797753, Blast_Score=211, Evalue=5e-55, Organism=Caenorhabditis elegans, GI32566772, Length=381, Percent_Identity=30.4461942257218, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17560912, Length=373, Percent_Identity=28.9544235924933, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17560914, Length=373, Percent_Identity=28.9544235924933, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI71982617, Length=251, Percent_Identity=27.4900398406374, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71982625, Length=251, Percent_Identity=27.4900398406374, Blast_Score=109, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6320438, Length=421, Percent_Identity=46.0807600950119, Blast_Score=384, Evalue=1e-107, Organism=Saccharomyces cerevisiae, GI6320267, Length=366, Percent_Identity=30.327868852459, Blast_Score=148, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6323954, Length=265, Percent_Identity=25.2830188679245, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI17137420, Length=402, Percent_Identity=47.2636815920398, Blast_Score=394, Evalue=1e-110, Organism=Drosophila melanogaster, GI24662918, Length=372, Percent_Identity=35.2150537634409, Blast_Score=235, Evalue=5e-62, Organism=Drosophila melanogaster, GI17136286, Length=354, Percent_Identity=28.2485875706215, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI24653280, Length=269, Percent_Identity=25.2788104089219, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24653276, Length=269, Percent_Identity=25.2788104089219, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24653278, Length=269, Percent_Identity=25.2788104089219, Blast_Score=97, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010961 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.37 [H]
Molecular weight: Translated: 44560; Mature: 44560
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYSQYFSAALGRLHDERRYRVFADLERIAGRFPHATWHSPNGPRNVVIWCSNDYLGMGQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCC HPKVVGAMVETATRVGTGAGGTRNIAGTHHPLVQLEAELADLHGKEAALLFTSGYVSNQT CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCH GIATLAKLIPDCLILSDALNHNSMIEGVRQSGCERQIWRHNDLAHLEQLLIAAGPSRPKL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCCCCCCE IACESLYSMDGDVAPLAAICDLAERYNAMTYVDEVHAVGMYGARGGGIAERDGVMHRIDI EEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHH LEGTLAKAFGCLGGYIAAKGEIIDAVRSYAPGFIFTTALPPPICSAATAAIKHLKSSSWE HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCHH RERHQDRAARVKAILNAAGLPVMDNDTHIVPLFVGDPEKCKQASDLLLEEHGIYIQPINY HHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEECCHHHHHHHHHHHHHHCCCEEEECCC PTVAKGTERLRITPSPYHDDGLIDRLAEALLQVWERLGLALHKKPLAAE CCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCC >Mature Secondary Structure MDYSQYFSAALGRLHDERRYRVFADLERIAGRFPHATWHSPNGPRNVVIWCSNDYLGMGQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCC HPKVVGAMVETATRVGTGAGGTRNIAGTHHPLVQLEAELADLHGKEAALLFTSGYVSNQT CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCH GIATLAKLIPDCLILSDALNHNSMIEGVRQSGCERQIWRHNDLAHLEQLLIAAGPSRPKL HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCCCCCCE IACESLYSMDGDVAPLAAICDLAERYNAMTYVDEVHAVGMYGARGGGIAERDGVMHRIDI EEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCHHHHHH LEGTLAKAFGCLGGYIAAKGEIIDAVRSYAPGFIFTTALPPPICSAATAAIKHLKSSSWE HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCCHH RERHQDRAARVKAILNAAGLPVMDNDTHIVPLFVGDPEKCKQASDLLLEEHGIYIQPINY HHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEECCHHHHHHHHHHHHHHCCCEEEECCC PTVAKGTERLRITPSPYHDDGLIDRLAEALLQVWERLGLALHKKPLAAE CCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3609750; 12597275 [H]