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The map label for this gene is yagS [H]

Identifier: 146343435

GI number: 146343435

Start: 6919317

End: 6920375

Strand: Direct

Name: yagS [H]

Synonym: BRADO6664

Alternate gene names: 146343435

Gene position: 6919317-6920375 (Clockwise)

Preceding gene: 146343434

Following gene: 146343436

Centisome position: 92.79

GC content: 70.35

Gene sequence:

>1059_bases
ATGAACCGGTTCGACTATGTGAAACCATCGACGGTCGCCGAGGCGGTCGCGGCGGCCGGCGCGCCGGGCGCGGCCTATCT
CGCATCCGGAACGAACCTGCTGGATCTGATGAAAGGCAATGTCGTCCGGCCGGAACGGCTGGTCGACATCACGCAGATCA
AGGAGCTCACGCGTATCGAGCCGCTCGCCAATGGCGATGTCCGGATCGGCGCGCTGGTGCGTAATGCCGACCTCGCTCAC
GACACCGGCTTCACGCGCGATTTTCCGGCGATCGCCGAAGCGCTGCTCTCGGGTGCCTCGGCACAGCTGCGCAATGCGGC
GACCGTCGGCGGCAACCTGCTGCAGCGGACGCGCTGCGCCTATTTCTACGATACGGCGTCGGCGTGCAACAAGCGCGTGC
CGGGCGCCGGCTGCGACGCGCGGGGCGGCGACAATCATCAGCACGCGGTGCTCGGCTGGAGCGAAGCGTGCATCGCCACC
AACCCGTCCGACTTCTGCGTCCCGCTCGCCGCGTTCGATGCGGTCGTGGAGATCGAAGGTTCGGCGGGCCGCCGCGAGGT
CGCGCTGGAGGCGCTGCATCTTCTGCCCGGCACCGCGCCGGAGCGTGAGACCGTGCTGGCGCCCGGCGAGTTGATCGTCG
CGGTCCGGTTGCCCGCGACCGCGCGCAGCTTCGCCAAGCACGCGCGATATCTGAAGGTGCGCGAGCGCAACTCCTACGCT
TTCGCGGTCGTCTCGGCCGCGGCCGGGCTCGTGATCGAGAACGGCAGCATCACGCAGGCGCGCCTTGCGCTGGGCGGCGT
CGCCGCCAAGCCATGGCGCGCGCGGGATGCTGAAGCTGTGCTCGCCGGTCACTCCGCCAGGCCGGACGCGTTCGAACGCG
CGGCCGACGCGGCGCTGCGCGACGCCATGCCCTCCGGCGACAACGCCTACAAGATCCCGCTCGCGCGCCAGCTGATCGTG
CGGGCGCTCGCCGCCGCAGCGCAGGGCACGCCGTCGCGCATGCCGGCGCTGCCGGCCTCTCCCTTCTCCTCCGTTCCAGG
AGTGCTTCATGACGCCTGA

Upstream 100 bases:

>100_bases
GCATGAGCGGCAATCTCTGCCGCTGCAGCGCCTATGTCGGCATCGTCGAGGCCGTGCTCGACGCGCAAAAGACGCTGACT
GAGAACAAGGAGCGCGCGGC

Downstream 100 bases:

>100_bases
GCTCAATCTCTCCCGCGATCCCGCCCATCTCCGGCACGGCTCGAACATCGGCCAGCCGCTGTCGCGCGTCGATGGTCTCG
CCAAGGTGACGGGCCGCGCG

Product: putative aldehyde or xanthine dehydrogenase, FAD-binding subunit (YagS-like)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MNRFDYVKPSTVAEAVAAAGAPGAAYLASGTNLLDLMKGNVVRPERLVDITQIKELTRIEPLANGDVRIGALVRNADLAH
DTGFTRDFPAIAEALLSGASAQLRNAATVGGNLLQRTRCAYFYDTASACNKRVPGAGCDARGGDNHQHAVLGWSEACIAT
NPSDFCVPLAAFDAVVEIEGSAGRREVALEALHLLPGTAPERETVLAPGELIVAVRLPATARSFAKHARYLKVRERNSYA
FAVVSAAAGLVIENGSITQARLALGGVAAKPWRARDAEAVLAGHSARPDAFERAADAALRDAMPSGDNAYKIPLARQLIV
RALAAAAQGTPSRMPALPASPFSSVPGVLHDA

Sequences:

>Translated_352_residues
MNRFDYVKPSTVAEAVAAAGAPGAAYLASGTNLLDLMKGNVVRPERLVDITQIKELTRIEPLANGDVRIGALVRNADLAH
DTGFTRDFPAIAEALLSGASAQLRNAATVGGNLLQRTRCAYFYDTASACNKRVPGAGCDARGGDNHQHAVLGWSEACIAT
NPSDFCVPLAAFDAVVEIEGSAGRREVALEALHLLPGTAPERETVLAPGELIVAVRLPATARSFAKHARYLKVRERNSYA
FAVVSAAAGLVIENGSITQARLALGGVAAKPWRARDAEAVLAGHSARPDAFERAADAALRDAMPSGDNAYKIPLARQLIV
RALAAAAQGTPSRMPALPASPFSSVPGVLHDA
>Mature_352_residues
MNRFDYVKPSTVAEAVAAAGAPGAAYLASGTNLLDLMKGNVVRPERLVDITQIKELTRIEPLANGDVRIGALVRNADLAH
DTGFTRDFPAIAEALLSGASAQLRNAATVGGNLLQRTRCAYFYDTASACNKRVPGAGCDARGGDNHQHAVLGWSEACIAT
NPSDFCVPLAAFDAVVEIEGSAGRREVALEALHLLPGTAPERETVLAPGELIVAVRLPATARSFAKHARYLKVRERNSYA
FAVVSAAAGLVIENGSITQARLALGGVAAKPWRARDAEAVLAGHSARPDAFERAADAALRDAMPSGDNAYKIPLARQLIV
RALAAAAQGTPSRMPALPASPFSSVPGVLHDA

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786479, Length=328, Percent_Identity=48.4756097560976, Blast_Score=261, Evalue=5e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 36799; Mature: 36799

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFDYVKPSTVAEAVAAAGAPGAAYLASGTNLLDLMKGNVVRPERLVDITQIKELTRIE
CCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHC
PLANGDVRIGALVRNADLAHDTGFTRDFPAIAEALLSGASAQLRNAATVGGNLLQRTRCA
CCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
YFYDTASACNKRVPGAGCDARGGDNHQHAVLGWSEACIATNPSDFCVPLAAFDAVVEIEG
HEECCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCHHEEHHHHHCEEEEECC
SAGRREVALEALHLLPGTAPERETVLAPGELIVAVRLPATARSFAKHARYLKVRERNSYA
CCCHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEEECCHHHHHHHHHHHHEEEEECCCEE
FAVVSAAAGLVIENGSITQARLALGGVAAKPWRARDAEAVLAGHSARPDAFERAADAALR
EEEEEHHCCEEEECCCCCHHHHHHCCCCCCCCCCCCCHHHEECCCCCCHHHHHHHHHHHH
DAMPSGDNAYKIPLARQLIVRALAAAAQGTPSRMPALPASPFSSVPGVLHDA
HCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHCCC
>Mature Secondary Structure
MNRFDYVKPSTVAEAVAAAGAPGAAYLASGTNLLDLMKGNVVRPERLVDITQIKELTRIE
CCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHC
PLANGDVRIGALVRNADLAHDTGFTRDFPAIAEALLSGASAQLRNAATVGGNLLQRTRCA
CCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
YFYDTASACNKRVPGAGCDARGGDNHQHAVLGWSEACIATNPSDFCVPLAAFDAVVEIEG
HEECCHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCEEECCCCHHEEHHHHHCEEEEECC
SAGRREVALEALHLLPGTAPERETVLAPGELIVAVRLPATARSFAKHARYLKVRERNSYA
CCCHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEEECCHHHHHHHHHHHHEEEEECCCEE
FAVVSAAAGLVIENGSITQARLALGGVAAKPWRARDAEAVLAGHSARPDAFERAADAALR
EEEEEHHCCEEEECCCCCHHHHHHCCCCCCCCCCCCCHHHEECCCCCCHHHHHHHHHHHH
DAMPSGDNAYKIPLARQLIVRALAAAAQGTPSRMPALPASPFSSVPGVLHDA
HCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]