| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343375
Identifier: 146343375
GI number: 146343375
Start: 6852598
End: 6853020
Strand: Direct
Name: 146343375
Synonym: BRADO6604
Alternate gene names: NA
Gene position: 6852598-6853020 (Clockwise)
Preceding gene: 146343372
Following gene: 146343376
Centisome position: 91.9
GC content: 62.88
Gene sequence:
>423_bases ATGACGAAATCAGCTGCGGCAAAGATGAAGTCCGACGGCTGGGAGATCGTCGATACCTCCGGATTTCTGCATCTGATCGG GCCGCTGTGGCAGCGGGTTCTCGACGGTGTCCATGAGTACGCCATTGTCACCGAGGACAAGCACCACAATCGCCGCGGCC TGGTCCAGGGCGGCGTGATCATGACGCTCGCCGACCGCAGCTGCGGCATGACGGCCCGCTTTGCCGCCGGCAAGGAGCAC ATGGCGACGATCCAGTTCGACACGCATTTCGTCGAGTCCGGCAAGATCGGCGAGACCCTGGTGTCGCGGCCGCATGTCGT GCGGATCACCCGCAGCCTCGTGTTCATCACCACCGAGGTGACCGCTGCGGACCGCGTGATCGCGATGGCGTCGGGCGTGT TCAAGATTTTGAAGAGCGAGTGA
Upstream 100 bases:
>100_bases TCGTCGAACGGCATGGCCATGCAGCTTGACTACACCAGCCCCGCGGCGGATGAAACGACCATGTGCCGGCCTGCGGCACC GATGGAAGGGGATGTCCGAG
Downstream 100 bases:
>100_bases GCCGCGGCTGTCTCCGGCGTCAGTGCGAGGAGCCAACGGGTCCGCGCAAGGCGCGGCCCGATGACAGGCTCCGCGACGAA GCAATCCAGGACTGTTTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Thioesterase
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MTKSAAAKMKSDGWEIVDTSGFLHLIGPLWQRVLDGVHEYAIVTEDKHHNRRGLVQGGVIMTLADRSCGMTARFAAGKEH MATIQFDTHFVESGKIGETLVSRPHVVRITRSLVFITTEVTAADRVIAMASGVFKILKSE
Sequences:
>Translated_140_residues MTKSAAAKMKSDGWEIVDTSGFLHLIGPLWQRVLDGVHEYAIVTEDKHHNRRGLVQGGVIMTLADRSCGMTARFAAGKEH MATIQFDTHFVESGKIGETLVSRPHVVRITRSLVFITTEVTAADRVIAMASGVFKILKSE >Mature_139_residues TKSAAAKMKSDGWEIVDTSGFLHLIGPLWQRVLDGVHEYAIVTEDKHHNRRGLVQGGVIMTLADRSCGMTARFAAGKEHM ATIQFDTHFVESGKIGETLVSRPHVVRITRSLVFITTEVTAADRVIAMASGVFKILKSE
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15393; Mature: 15262
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKSAAAKMKSDGWEIVDTSGFLHLIGPLWQRVLDGVHEYAIVTEDKHHNRRGLVQGGVI CCCCHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEECCCEE MTLADRSCGMTARFAAGKEHMATIQFDTHFVESGKIGETLVSRPHVVRITRSLVFITTEV EEEECCCCCCEEEECCCCCCEEEEEECCEEECCCCCCHHHHCCCEEEEEEEEEEEEEEEC TAADRVIAMASGVFKILKSE CHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TKSAAAKMKSDGWEIVDTSGFLHLIGPLWQRVLDGVHEYAIVTEDKHHNRRGLVQGGVI CCCHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEECCCEE MTLADRSCGMTARFAAGKEHMATIQFDTHFVESGKIGETLVSRPHVVRITRSLVFITTEV EEEECCCCCCEEEECCCCCCEEEEEECCEEECCCCCCHHHHCCCEEEEEEEEEEEEEEEC TAADRVIAMASGVFKILKSE CHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA