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The map label for this gene is tsr [C]

Identifier: 146343340

GI number: 146343340

Start: 6814715

End: 6816406

Strand: Direct

Name: tsr [C]

Synonym: BRADO6566

Alternate gene names: 146343340

Gene position: 6814715-6816406 (Clockwise)

Preceding gene: 146343338

Following gene: 146343345

Centisome position: 91.39

GC content: 67.14

Gene sequence:

>1692_bases
ATGCCGTCGTTTTGCAACCTCTCGATTCGCAATAAGGTGTTGTTTGCCTTCGGCATCGTGCTGATGACGGCCATGGGGCT
TGGCGGCTTCTCGATCGACCGGCTAGGGACCGTGAATGGCTCGGCCGCCGAGGTCCGCGACAATTGGCTGCCGGCGACAG
GATGGCTCGGCACGATCTCGAAGTCCGTGGAGCAGTATCGCGCACGTCAAGGCCAGTTCCTGTTGGCGACCACGGCCGAA
GCCAAGAACGAGCAGGAGCGGCAGATCAGCGAGAGCCTGGAGCTCTTCAACAAGACCTGGGCTCTCTACGAGCCCACGGT
GACGACAGCCGAAGAGAGGGCGCTGGTGGCGGCGTTCAAGAGGCCCTGGACTGCATATCTCGAGGAAAGCAAGCCGCTGC
TCGAGCTGTCGCGCAAGAACCAGACCGAGGCGGCCACCGCGTTGTTCATGGGCAGGCTGCGTGAAGATTTTGTCCAGGCG
CGCAAGGCGCTCGAGCAGGACCTCGCCTGGAACGTCGAGCAGGGCAAGAAGGAGGCCGACAAGGGCGCCGCCGTCTATCA
GTCCTCGCTGTCATGGATCTTCGCCACGATCGCGCTCGCTGCCCTGCTCTGCACCGCGATGGGCTATCTCATTGTCTCGG
GCGTCGCGCGACCGATCACCGCGATGACCGAGGCGATGCGCAGGCTCGCCGGCGGCGACATGACCGCCGCGATCCCCGGC
ACCGAGCGCAAGGACGAGATCGGCAAGATGGCCGGTGCCGTGCAAGTGTTCAAGGACAACGCCATCGAGACCGAGCGGCT
CCGCGCGGAGCAGGCCGAGGCCGAGAAGCTCGCCGCCGAGCGGCGCAAGCGCGACATGCACGCGCTTGCCAACAGCTTCG
AGGGCGCGGTCGGTGAGATCATCAACACCGTGTCATCGGCCTCGACCGAGCTCGAAGCCTCCGCGTCGACGCTCACCTCG
ACCGCCGAGCGCACGCAGCAGCGCACCACCGCCGTCGCCGCGGCCTCGGAGCAGGCCACCGCGAACGTGCAGTCGGTGGC
GTCGGCGACGGAGGAGCTCAGCTCGTCCGTCACCGAGATCAGCCGGCAGGTGCAGGACTCCGCACGGATCGCCAACGAGG
CGGTCGACCAGGCGCGCAGAACCAACGATCGTGTCAGCGAGCTGTCGAAAGCAGCGGCGCGGATCGGCGACGTCGTCGAG
CTGATCAACACCATCGCCGGACAGACCAACCTGCTGGCGCTGAACGCCACCATCGAGGCGGCGCGTGCGGGCGAGGCCGG
GCGCGGCTTCGCCGTGGTCGCCACCGAGGTCAAGGCGCTGGCCGAGCAGACCGCGAAGGCGACCGGCGAAATCGGCCAGC
AGATCTCCGGCATCCAGGCTGCCACCCAGGACTCGGTCGGCGCCATCAGGGAGATCAGCGGCACGATCGAGAAGCTCGCA
GAGATTTCGTCGACCATCGCCGCGGCAGTCGAGGAACAGGGCGCCGCGACCCAGGAGATCTCGCGCAACATCCAGCAGGC
CGCGCAGGGCACGCACGAAGTGTCGTCGAACATCACTGACGTGCAGCACGGCGCCGCCGAGACCGGCTCGGCGTCCTCGC
AGGTGCTGTCGGCCGCGCAGACGCTGTCGCAGGACAGCAACAGGCTGAAGCTGGAGGTCGGGCGCTTCCTGAGCACGGTG
CGGGCGGCGTAA

Upstream 100 bases:

>100_bases
CAACGATGAGCGGCCGGTGCATATATTTGCAGCAACGAGCCTCTGCTCCGGCCGGCCGCACCCCCGACGATCCCCGCACG
ATTGATATCTGGAGTCCAAA

Downstream 100 bases:

>100_bases
GGGCGCTAGCTTTGTGAGTTGCTTACCCCGCTCTCAACCCAACGACGGTGAACTCCCCTCCCCCTTGCGGGGAGGGGAGC
GCACCGTCACGGCCTCACCG

Product: putative methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 563; Mature: 562

Protein sequence:

>563_residues
MPSFCNLSIRNKVLFAFGIVLMTAMGLGGFSIDRLGTVNGSAAEVRDNWLPATGWLGTISKSVEQYRARQGQFLLATTAE
AKNEQERQISESLELFNKTWALYEPTVTTAEERALVAAFKRPWTAYLEESKPLLELSRKNQTEAATALFMGRLREDFVQA
RKALEQDLAWNVEQGKKEADKGAAVYQSSLSWIFATIALAALLCTAMGYLIVSGVARPITAMTEAMRRLAGGDMTAAIPG
TERKDEIGKMAGAVQVFKDNAIETERLRAEQAEAEKLAAERRKRDMHALANSFEGAVGEIINTVSSASTELEASASTLTS
TAERTQQRTTAVAAASEQATANVQSVASATEELSSSVTEISRQVQDSARIANEAVDQARRTNDRVSELSKAAARIGDVVE
LINTIAGQTNLLALNATIEAARAGEAGRGFAVVATEVKALAEQTAKATGEIGQQISGIQAATQDSVGAIREISGTIEKLA
EISSTIAAAVEEQGAATQEISRNIQQAAQGTHEVSSNITDVQHGAAETGSASSQVLSAAQTLSQDSNRLKLEVGRFLSTV
RAA

Sequences:

>Translated_563_residues
MPSFCNLSIRNKVLFAFGIVLMTAMGLGGFSIDRLGTVNGSAAEVRDNWLPATGWLGTISKSVEQYRARQGQFLLATTAE
AKNEQERQISESLELFNKTWALYEPTVTTAEERALVAAFKRPWTAYLEESKPLLELSRKNQTEAATALFMGRLREDFVQA
RKALEQDLAWNVEQGKKEADKGAAVYQSSLSWIFATIALAALLCTAMGYLIVSGVARPITAMTEAMRRLAGGDMTAAIPG
TERKDEIGKMAGAVQVFKDNAIETERLRAEQAEAEKLAAERRKRDMHALANSFEGAVGEIINTVSSASTELEASASTLTS
TAERTQQRTTAVAAASEQATANVQSVASATEELSSSVTEISRQVQDSARIANEAVDQARRTNDRVSELSKAAARIGDVVE
LINTIAGQTNLLALNATIEAARAGEAGRGFAVVATEVKALAEQTAKATGEIGQQISGIQAATQDSVGAIREISGTIEKLA
EISSTIAAAVEEQGAATQEISRNIQQAAQGTHEVSSNITDVQHGAAETGSASSQVLSAAQTLSQDSNRLKLEVGRFLSTV
RAA
>Mature_562_residues
PSFCNLSIRNKVLFAFGIVLMTAMGLGGFSIDRLGTVNGSAAEVRDNWLPATGWLGTISKSVEQYRARQGQFLLATTAEA
KNEQERQISESLELFNKTWALYEPTVTTAEERALVAAFKRPWTAYLEESKPLLELSRKNQTEAATALFMGRLREDFVQAR
KALEQDLAWNVEQGKKEADKGAAVYQSSLSWIFATIALAALLCTAMGYLIVSGVARPITAMTEAMRRLAGGDMTAAIPGT
ERKDEIGKMAGAVQVFKDNAIETERLRAEQAEAEKLAAERRKRDMHALANSFEGAVGEIINTVSSASTELEASASTLTST
AERTQQRTTAVAAASEQATANVQSVASATEELSSSVTEISRQVQDSARIANEAVDQARRTNDRVSELSKAAARIGDVVEL
INTIAGQTNLLALNATIEAARAGEAGRGFAVVATEVKALAEQTAKATGEIGQQISGIQAATQDSVGAIREISGTIEKLAE
ISSTIAAAVEEQGAATQEISRNIQQAAQGTHEVSSNITDVQHGAAETGSASSQVLSAAQTLSQDSNRLKLEVGRFLSTVR
AA

Specific function: May bind attractants or detect changes in the extracellular concentration of soluble sugars [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=518, Percent_Identity=26.6409266409266, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1787690, Length=463, Percent_Identity=26.7818574514039, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1788195, Length=206, Percent_Identity=36.4077669902913, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1788194, Length=195, Percent_Identity=32.3076923076923, Blast_Score=89, Evalue=6e-19,
Organism=Escherichia coli, GI1789453, Length=234, Percent_Identity=29.4871794871795, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 59964; Mature: 59833

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2 ; PS50192 T_SNARE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFCNLSIRNKVLFAFGIVLMTAMGLGGFSIDRLGTVNGSAAEVRDNWLPATGWLGTIS
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHCCCCCCCCHHHHHH
KSVEQYRARQGQFLLATTAEAKNEQERQISESLELFNKTWALYEPTVTTAEERALVAAFK
HHHHHHHHHCCCEEEEECCHHCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHH
RPWTAYLEESKPLLELSRKNQTEAATALFMGRLREDFVQARKALEQDLAWNVEQGKKEAD
CCHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KGAAVYQSSLSWIFATIALAALLCTAMGYLIVSGVARPITAMTEAMRRLAGGDMTAAIPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
TERKDEIGKMAGAVQVFKDNAIETERLRAEQAEAEKLAAERRKRDMHALANSFEGAVGEI
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
INTVSSASTELEASASTLTSTAERTQQRTTAVAAASEQATANVQSVASATEELSSSVTEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRQVQDSARIANEAVDQARRTNDRVSELSKAAARIGDVVELINTIAGQTNLLALNATIEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHH
ARAGEAGRGFAVVATEVKALAEQTAKATGEIGQQISGIQAATQDSVGAIREISGTIEKLA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EISSTIAAAVEEQGAATQEISRNIQQAAQGTHEVSSNITDVQHGAAETGSASSQVLSAAQ
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCCCCCHHHHHHHHHH
TLSQDSNRLKLEVGRFLSTVRAA
HHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PSFCNLSIRNKVLFAFGIVLMTAMGLGGFSIDRLGTVNGSAAEVRDNWLPATGWLGTIS
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHCCCCCCCCHHHHHH
KSVEQYRARQGQFLLATTAEAKNEQERQISESLELFNKTWALYEPTVTTAEERALVAAFK
HHHHHHHHHCCCEEEEECCHHCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHH
RPWTAYLEESKPLLELSRKNQTEAATALFMGRLREDFVQARKALEQDLAWNVEQGKKEAD
CCHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KGAAVYQSSLSWIFATIALAALLCTAMGYLIVSGVARPITAMTEAMRRLAGGDMTAAIPG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
TERKDEIGKMAGAVQVFKDNAIETERLRAEQAEAEKLAAERRKRDMHALANSFEGAVGEI
CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
INTVSSASTELEASASTLTSTAERTQQRTTAVAAASEQATANVQSVASATEELSSSVTEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRQVQDSARIANEAVDQARRTNDRVSELSKAAARIGDVVELINTIAGQTNLLALNATIEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHH
ARAGEAGRGFAVVATEVKALAEQTAKATGEIGQQISGIQAATQDSVGAIREISGTIEKLA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EISSTIAAAVEEQGAATQEISRNIQQAAQGTHEVSSNITDVQHGAAETGSASSQVLSAAQ
HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHCCCHHHHCCCCCCCCHHHHHHHHHH
TLSQDSNRLKLEVGRFLSTVRAA
HHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8436949 [H]