| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343135
Identifier: 146343135
GI number: 146343135
Start: 6588001
End: 6590022
Strand: Reverse
Name: 146343135
Synonym: BRADO6333
Alternate gene names: NA
Gene position: 6590022-6588001 (Counterclockwise)
Preceding gene: 146343141
Following gene: 146343134
Centisome position: 88.38
GC content: 64.74
Gene sequence:
>2022_bases ATGGTTCCATCTGCCAAGAAAATCCTGCTGACAGCGGCCTCGGTATCGCTGGCTCTGTCGCAGAGCGCCGACGCGGGCGA ACGTTGGGGGGAGACGAGCAAGAACAATCCGTATGTCGCTGGCGACATGCACAACCACAACACCTGCACCGACGGCTCGG TGGCGGCGGGCTATTCGATCGATCGCGCAGTCGGCAAGGGCACGGCGGCGGCCGGCGGCAATAATTTTGACCTCGACTGG TTCACGCTCGGCAACCACGGCGGCTCCGGCAACCGCGACTGCCGCTTCAGCGATACGAGCGCCAACATCCCGGGTGACAC CACCACCTATTGGAGCCAGACGCTCGGCAAGACCATCGACGGCATCACCATCACCAGCCTGAAGGGCACGCCGAACGGCA CCGACACGGGCGCCACGATGTGGCGTTGGCAGTCGATCCAGGAGATCGAGTATCCGACCATCGTCGCGCGTACCGCCACC TATAACAAGGTGCTGGTCGAAGGTCTGGAATGGATCGTTCCGGGTCACGAGCACACCGACGTTGCAGTCATCGCCGGTCA GAATCCCCGCGGCTACGGCAATGCCGACAAGATGGCCGAGTTCGAATACCGCTACGACCGCGCCGACACCGACGCGATTG GTCCGGTCGATGCCAGCAACAACCCGATCTGGACCGGCAAGGACAATGTGAACAACTCCGGCACCGCCGGTCACGGGAAG GCGCTCGCCGGCATCACCTGGCTGCAGGCGAAGTATCCGCTGCAGTCCTACGCGATCCCGACCCACACCGAGCGTCAGGG ACCGTTCAACGCGACCGGCACCGCCGGCTACAACATCGAGCACTTCCGCGACTTCAACAATGCCGGCCCGACGGTGGCGT TCGGCATCGAGGCTCCGGGCCACATGGCCGAAGGCGGCCTCACCGGCGGCTCCGGATCGTACAAGTCGGGCGCGGTCGGC GGCGGCACCTACGGCATGCATGGCGTCTACACCGCCAAGGTCGGCGGCCTGTGGGACGGCCTGCTCGGCGAGGGACGCAA CATCTTCGTGTTCCAGAGCTCCGACTGGCACAGCCGCGGCGTCTATGGTGCACGCGATGCCAGCACCACGGCGGACTTCA TCCCTGGCGAATACACCCGCCTCTACGTTCCGAACGAGCGGCGCTTCGACCAGCAGTCGATCATCGACGGCATGCGTTCG GGCAATTCCTACTCGGTGAACGCCCAGATCATCGGCTCGGACATGGTGTTCCGCGCCAAGGGCGAGTGGGATGACGACTG GAAGACGATGGGCGAGACGCTGGTGGTTCGTCCGGGCGAGAAGATCGTGCTCGAGATGGAGATGACCGTCCCGGCCACGA ACAACAGCCCGTACACCTTCAACAACCCGCTGCTGCTGCCGGTCGGCGTCAAGCAGCCGCTCAACAAGCCCTCTCTCGAC CACGTCGATCTGATCACCGGTGACATCACCGGCCCGATCGCGCCGGGAGCTCCGGGCTATGCGGTCGCCAATGCCGCCGG CACCGCCGGTGCGGCCATCGTCTACAATCCGTCGGCGAAGATCGCGAAGCAGATCCAGGCGACCAAGATGCAGAGCTACA GACTGCGCGATGGTTCGACCCGCCTCAGCTTCCGGACCACCTTCACCGCGGGCAGCACCCCGTTCTACATCCGCGCCCGC GGCACCAACATCCCGCCGGCCACGCCGAACGTGTCCGACAGCGCCGGCAATCCGCTGCTCGACCTCAACAACGTCAATGT CAGCTGCACCGACGCGGCGTGCCCGTCGCACCTCGGTGTTGTCAACGGCGTGAAGAAGGTCACCAACGACGTGCAGGCCT GGTCGAACGTCTGGTTCTATGCGAACCCGGTCTTCGTCCGCACCCGCGGCACGCCGGAACTGCTTGTCGAGAAGAATGCG GAGCTGGCGCGCAAGCTGGCTTGGGATCATCATCACTGGCACGACTGGGATCATTGGGGTCACTGGGGCCACTGGGGTCG CTGGGCCTTCAACCGCGACTGA
Upstream 100 bases:
>100_bases CTGTCTCCGAGTTTTGGTTTGGTCGCCACGCGAAAAGACAGCGCATTACTCGCGTTGTCATCAACATTTTGACTCGATCG AATTCTTCAGGGGCAACGAC
Downstream 100 bases:
>100_bases TTGATCCGCAACGATCCGGCGGGCGTCGCCCCGCCGGATCTGCTAATCGTGATTGGCGCCGGTTCGCGAACCGGCGCCTT GACTTTGGAATAGCCGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: S-Layer Domain Protein; PHP Domain Protein; Signal Peptide; Php Domain Protein; Phosphoesterase PHP Domain Protein
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MVPSAKKILLTAASVSLALSQSADAGERWGETSKNNPYVAGDMHNHNTCTDGSVAAGYSIDRAVGKGTAAAGGNNFDLDW FTLGNHGGSGNRDCRFSDTSANIPGDTTTYWSQTLGKTIDGITITSLKGTPNGTDTGATMWRWQSIQEIEYPTIVARTAT YNKVLVEGLEWIVPGHEHTDVAVIAGQNPRGYGNADKMAEFEYRYDRADTDAIGPVDASNNPIWTGKDNVNNSGTAGHGK ALAGITWLQAKYPLQSYAIPTHTERQGPFNATGTAGYNIEHFRDFNNAGPTVAFGIEAPGHMAEGGLTGGSGSYKSGAVG GGTYGMHGVYTAKVGGLWDGLLGEGRNIFVFQSSDWHSRGVYGARDASTTADFIPGEYTRLYVPNERRFDQQSIIDGMRS GNSYSVNAQIIGSDMVFRAKGEWDDDWKTMGETLVVRPGEKIVLEMEMTVPATNNSPYTFNNPLLLPVGVKQPLNKPSLD HVDLITGDITGPIAPGAPGYAVANAAGTAGAAIVYNPSAKIAKQIQATKMQSYRLRDGSTRLSFRTTFTAGSTPFYIRAR GTNIPPATPNVSDSAGNPLLDLNNVNVSCTDAACPSHLGVVNGVKKVTNDVQAWSNVWFYANPVFVRTRGTPELLVEKNA ELARKLAWDHHHWHDWDHWGHWGHWGRWAFNRD
Sequences:
>Translated_673_residues MVPSAKKILLTAASVSLALSQSADAGERWGETSKNNPYVAGDMHNHNTCTDGSVAAGYSIDRAVGKGTAAAGGNNFDLDW FTLGNHGGSGNRDCRFSDTSANIPGDTTTYWSQTLGKTIDGITITSLKGTPNGTDTGATMWRWQSIQEIEYPTIVARTAT YNKVLVEGLEWIVPGHEHTDVAVIAGQNPRGYGNADKMAEFEYRYDRADTDAIGPVDASNNPIWTGKDNVNNSGTAGHGK ALAGITWLQAKYPLQSYAIPTHTERQGPFNATGTAGYNIEHFRDFNNAGPTVAFGIEAPGHMAEGGLTGGSGSYKSGAVG GGTYGMHGVYTAKVGGLWDGLLGEGRNIFVFQSSDWHSRGVYGARDASTTADFIPGEYTRLYVPNERRFDQQSIIDGMRS GNSYSVNAQIIGSDMVFRAKGEWDDDWKTMGETLVVRPGEKIVLEMEMTVPATNNSPYTFNNPLLLPVGVKQPLNKPSLD HVDLITGDITGPIAPGAPGYAVANAAGTAGAAIVYNPSAKIAKQIQATKMQSYRLRDGSTRLSFRTTFTAGSTPFYIRAR GTNIPPATPNVSDSAGNPLLDLNNVNVSCTDAACPSHLGVVNGVKKVTNDVQAWSNVWFYANPVFVRTRGTPELLVEKNA ELARKLAWDHHHWHDWDHWGHWGHWGRWAFNRD >Mature_673_residues MVPSAKKILLTAASVSLALSQSADAGERWGETSKNNPYVAGDMHNHNTCTDGSVAAGYSIDRAVGKGTAAAGGNNFDLDW FTLGNHGGSGNRDCRFSDTSANIPGDTTTYWSQTLGKTIDGITITSLKGTPNGTDTGATMWRWQSIQEIEYPTIVARTAT YNKVLVEGLEWIVPGHEHTDVAVIAGQNPRGYGNADKMAEFEYRYDRADTDAIGPVDASNNPIWTGKDNVNNSGTAGHGK ALAGITWLQAKYPLQSYAIPTHTERQGPFNATGTAGYNIEHFRDFNNAGPTVAFGIEAPGHMAEGGLTGGSGSYKSGAVG GGTYGMHGVYTAKVGGLWDGLLGEGRNIFVFQSSDWHSRGVYGARDASTTADFIPGEYTRLYVPNERRFDQQSIIDGMRS GNSYSVNAQIIGSDMVFRAKGEWDDDWKTMGETLVVRPGEKIVLEMEMTVPATNNSPYTFNNPLLLPVGVKQPLNKPSLD HVDLITGDITGPIAPGAPGYAVANAAGTAGAAIVYNPSAKIAKQIQATKMQSYRLRDGSTRLSFRTTFTAGSTPFYIRAR GTNIPPATPNVSDSAGNPLLDLNNVNVSCTDAACPSHLGVVNGVKKVTNDVQAWSNVWFYANPVFVRTRGTPELLVEKNA ELARKLAWDHHHWHDWDHWGHWGHWGRWAFNRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72597; Mature: 72597
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPSAKKILLTAASVSLALSQSADAGERWGETSKNNPYVAGDMHNHNTCTDGSVAAGYSI CCCCCCEEEEEEEEEEEEECCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCEECCCCH DRAVGKGTAAAGGNNFDLDWFTLGNHGGSGNRDCRFSDTSANIPGDTTTYWSQTLGKTID HHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCC GITITSLKGTPNGTDTGATMWRWQSIQEIEYPTIVARTATYNKVLVEGLEWIVPGHEHTD CEEEEEECCCCCCCCCCCEEEEECCHHHCCCCEEEEECCHHHHHHHHCHHEEECCCCCCC VAVIAGQNPRGYGNADKMAEFEYRYDRADTDAIGPVDASNNPIWTGKDNVNNSGTAGHGK EEEEECCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC ALAGITWLQAKYPLQSYAIPTHTERQGPFNATGTAGYNIEHFRDFNNAGPTVAFGIEAPG EEEEEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCC HMAEGGLTGGSGSYKSGAVGGGTYGMHGVYTAKVGGLWDGLLGEGRNIFVFQSSDWHSRG CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCEEEEEECCCCCCCC VYGARDASTTADFIPGEYTRLYVPNERRFDQQSIIDGMRSGNSYSVNAQIIGSDMVFRAK CCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEEECCCEEEEEC GEWDDDWKTMGETLVVRPGEKIVLEMEMTVPATNNSPYTFNNPLLLPVGVKQPLNKPSLD CCCCHHHHHCCCEEEECCCCEEEEEEEEEECCCCCCCEEECCCEEEEECCCCCCCCCCCC HVDLITGDITGPIAPGAPGYAVANAAGTAGAAIVYNPSAKIAKQIQATKMQSYRLRDGST EEEEEECCCCCCCCCCCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHEEECCCCE RLSFRTTFTAGSTPFYIRARGTNIPPATPNVSDSAGNPLLDLNNVNVSCTDAACPSHLGV EEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCHHHH VNGVKKVTNDVQAWSNVWFYANPVFVRTRGTPELLVEKNAELARKLAWDHHHWHDWDHWG HHHHHHHHHHHHHHHCEEEEECEEEEEECCCCCEEEECCHHHHHHHHCCCCCCCCCCCCC HWGHWGRWAFNRD CCCCCCCEEECCC >Mature Secondary Structure MVPSAKKILLTAASVSLALSQSADAGERWGETSKNNPYVAGDMHNHNTCTDGSVAAGYSI CCCCCCEEEEEEEEEEEEECCCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCEECCCCH DRAVGKGTAAAGGNNFDLDWFTLGNHGGSGNRDCRFSDTSANIPGDTTTYWSQTLGKTID HHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCC GITITSLKGTPNGTDTGATMWRWQSIQEIEYPTIVARTATYNKVLVEGLEWIVPGHEHTD CEEEEEECCCCCCCCCCCEEEEECCHHHCCCCEEEEECCHHHHHHHHCHHEEECCCCCCC VAVIAGQNPRGYGNADKMAEFEYRYDRADTDAIGPVDASNNPIWTGKDNVNNSGTAGHGK EEEEECCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC ALAGITWLQAKYPLQSYAIPTHTERQGPFNATGTAGYNIEHFRDFNNAGPTVAFGIEAPG EEEEEEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEECCCCC HMAEGGLTGGSGSYKSGAVGGGTYGMHGVYTAKVGGLWDGLLGEGRNIFVFQSSDWHSRG CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCEEEEEECCCCCCCC VYGARDASTTADFIPGEYTRLYVPNERRFDQQSIIDGMRSGNSYSVNAQIIGSDMVFRAK CCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEEECCCEEEEEC GEWDDDWKTMGETLVVRPGEKIVLEMEMTVPATNNSPYTFNNPLLLPVGVKQPLNKPSLD CCCCHHHHHCCCEEEECCCCEEEEEEEEEECCCCCCCEEECCCEEEEECCCCCCCCCCCC HVDLITGDITGPIAPGAPGYAVANAAGTAGAAIVYNPSAKIAKQIQATKMQSYRLRDGST EEEEEECCCCCCCCCCCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHEEECCCCE RLSFRTTFTAGSTPFYIRARGTNIPPATPNVSDSAGNPLLDLNNVNVSCTDAACPSHLGV EEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEECCCCCCCHHHH VNGVKKVTNDVQAWSNVWFYANPVFVRTRGTPELLVEKNAELARKLAWDHHHWHDWDHWG HHHHHHHHHHHHHHHCEEEEECEEEEEECCCCCEEEECCHHHHHHHHCCCCCCCCCCCCC HWGHWGRWAFNRD CCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA