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The map label for this gene is yjiA [H]

Identifier: 146343075

GI number: 146343075

Start: 6512375

End: 6513421

Strand: Reverse

Name: yjiA [H]

Synonym: BRADO6267

Alternate gene names: 146343075

Gene position: 6513421-6512375 (Counterclockwise)

Preceding gene: 146343076

Following gene: 146343074

Centisome position: 87.35

GC content: 62.85

Gene sequence:

>1047_bases
GTGAGCATGTCCGACGCGAGCAAGACCCCCGTGACGGTGCTGACCGGCTATCTCGGCGCCGGCAAGACCACGCTTCTCAA
CCGCATCCTCTCCGAAGACCACGGCAAGAAGTACGCCGTCATCGTCAACGAGTTCGGCGAGATCGGCATCGACAACGACC
TCATCGTCGGCGCCGATGAGGAAGTGTTCGAGATGAACAATGGCTGCATCTGCTGCACCGTGCGCGGCGACCTCGTCCGC
ATCATCTCCGGCCTGATGCGCCGCAAGGGCAAGTTCGACGCCATCATCGTCGAGACCACCGGCCTCGCCGATCCGGCGCC
GGTGGCGCAGACCTTCTTCGTCGACGAGGACGTGCAGAAGAACGCGCGGCTCGATGCCGTCGTCACCGTGGCCGACGCCA
AGTGGCTGTCGGACCGGCTCAAGGACGCGCCGGAAGCGAAGAACCAGATCGCGTTTGCCGACGTCATCGTGCTCAACAAG
ACCGATCTCGTCACCAAGCCGGAGCTCGCCGAAGTCGAGGCGCGGATCCGCGCGATCAACCCTTACGCCCGGCTGCATCG
CACCGAGCGCTGCCAGGTGGCGATCGCTGACGTGCTGGAGCGCGGCGCGTTCGATCTCGATCGTATTCTTGAAATCGAGC
CGGAATTTTTGAACGCGGGCGATGATCACGATCATCACCACCATGATCACGACCACGGCCATGATCATCACCATCATCAC
GATCACGGCCTGAAGCACTATCACGACGAGGAGATGCAATCGCTGTCGCTGCGCTCCGACAAGCCGCTCGATCCGTCGAA
GTTCATGCCGTGGCTGCAGAACCTGGTGCAGACCGAGGGCGGCAAGATCCTGCGCTCGAAGGGCATCCTGGCGTTCCAGG
ACGATGACGACCGCTACGTCTTCCAGGGCGTGCACATGATGCTGGAGGGCGATCACCAGCGGAAGTGGAAGCCGGACGAG
TCGCGGCAGAGCCGCGTCGTCTTCATCGGCCGCGAGCTGCCGGAAGACGCCATCCGCGAAGGTTTTGAGCGCTGCATCGT
ATCCTGA

Upstream 100 bases:

>100_bases
AATATAAGGGCCCTGAAGAGCGCGCTGGTCCGTTAGGGTTTTGGCCCTCGCGGGCCGCAGCGCTTTTGAGCCATTTTCGA
CGCGACCTTAAGTTTTCGGA

Downstream 100 bases:

>100_bases
TGAGCTCGTTCGATCAGAGCGGCGAGGCCGCATCCATCGTCTCCGTCACCGACAAGGTGAAGCCGATCTCGCTCGGCATG
GCGGTCACATCCGTGCACTA

Product: putative cobalamin synthesis protein/P47K family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MSMSDASKTPVTVLTGYLGAGKTTLLNRILSEDHGKKYAVIVNEFGEIGIDNDLIVGADEEVFEMNNGCICCTVRGDLVR
IISGLMRRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQKNARLDAVVTVADAKWLSDRLKDAPEAKNQIAFADVIVLNK
TDLVTKPELAEVEARIRAINPYARLHRTERCQVAIADVLERGAFDLDRILEIEPEFLNAGDDHDHHHHDHDHGHDHHHHH
DHGLKHYHDEEMQSLSLRSDKPLDPSKFMPWLQNLVQTEGGKILRSKGILAFQDDDDRYVFQGVHMMLEGDHQRKWKPDE
SRQSRVVFIGRELPEDAIREGFERCIVS

Sequences:

>Translated_348_residues
MSMSDASKTPVTVLTGYLGAGKTTLLNRILSEDHGKKYAVIVNEFGEIGIDNDLIVGADEEVFEMNNGCICCTVRGDLVR
IISGLMRRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQKNARLDAVVTVADAKWLSDRLKDAPEAKNQIAFADVIVLNK
TDLVTKPELAEVEARIRAINPYARLHRTERCQVAIADVLERGAFDLDRILEIEPEFLNAGDDHDHHHHDHDHGHDHHHHH
DHGLKHYHDEEMQSLSLRSDKPLDPSKFMPWLQNLVQTEGGKILRSKGILAFQDDDDRYVFQGVHMMLEGDHQRKWKPDE
SRQSRVVFIGRELPEDAIREGFERCIVS
>Mature_347_residues
SMSDASKTPVTVLTGYLGAGKTTLLNRILSEDHGKKYAVIVNEFGEIGIDNDLIVGADEEVFEMNNGCICCTVRGDLVRI
ISGLMRRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQKNARLDAVVTVADAKWLSDRLKDAPEAKNQIAFADVIVLNKT
DLVTKPELAEVEARIRAINPYARLHRTERCQVAIADVLERGAFDLDRILEIEPEFLNAGDDHDHHHHDHDHGHDHHHHHD
HGLKHYHDEEMQSLSLRSDKPLDPSKFMPWLQNLVQTEGGKILRSKGILAFQDDDDRYVFQGVHMMLEGDHQRKWKPDES
RQSRVVFIGRELPEDAIREGFERCIVS

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=357, Percent_Identity=34.1736694677871, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI126722884, Length=357, Percent_Identity=33.8935574229692, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI148727351, Length=357, Percent_Identity=33.8935574229692, Blast_Score=207, Evalue=9e-54,
Organism=Homo sapiens, GI146231952, Length=357, Percent_Identity=33.6134453781513, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI223941779, Length=357, Percent_Identity=32.2128851540616, Blast_Score=192, Evalue=5e-49,
Organism=Homo sapiens, GI223941776, Length=344, Percent_Identity=32.8488372093023, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI119120938, Length=135, Percent_Identity=49.6296296296296, Blast_Score=139, Evalue=3e-33,
Organism=Homo sapiens, GI310124599, Length=207, Percent_Identity=24.6376811594203, Blast_Score=78, Evalue=9e-15,
Organism=Escherichia coli, GI87082430, Length=337, Percent_Identity=33.8278931750742, Blast_Score=179, Evalue=3e-46,
Organism=Escherichia coli, GI1788499, Length=170, Percent_Identity=35.8823529411765, Blast_Score=93, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6324356, Length=250, Percent_Identity=33.2, Blast_Score=132, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 39328; Mature: 39197

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMSDASKTPVTVLTGYLGAGKTTLLNRILSEDHGKKYAVIVNEFGEIGIDNDLIVGADE
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEECCCH
EVFEMNNGCICCTVRGDLVRIISGLMRRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQK
HHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHEEECCCHHHH
NARLDAVVTVADAKWLSDRLKDAPEAKNQIAFADVIVLNKTDLVTKPELAEVEARIRAIN
CCCEEEEEEEHHHHHHHHHHHCCCCHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHCC
PYARLHRTERCQVAIADVLERGAFDLDRILEIEPEFLNAGDDHDHHHHDHDHGHDHHHHH
HHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
DHGLKHYHDEEMQSLSLRSDKPLDPSKFMPWLQNLVQTEGGKILRSKGILAFQDDDDRYV
CCCCHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCH
FQGVHMMLEGDHQRKWKPDESRQSRVVFIGRELPEDAIREGFERCIVS
HHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SMSDASKTPVTVLTGYLGAGKTTLLNRILSEDHGKKYAVIVNEFGEIGIDNDLIVGADE
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEECCCH
EVFEMNNGCICCTVRGDLVRIISGLMRRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQK
HHHCCCCCEEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHEEECCCHHHH
NARLDAVVTVADAKWLSDRLKDAPEAKNQIAFADVIVLNKTDLVTKPELAEVEARIRAIN
CCCEEEEEEEHHHHHHHHHHHCCCCHHCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHCC
PYARLHRTERCQVAIADVLERGAFDLDRILEIEPEFLNAGDDHDHHHHDHDHGHDHHHHH
HHHHHCCCHHHHHHHHHHHHCCCCCHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
DHGLKHYHDEEMQSLSLRSDKPLDPSKFMPWLQNLVQTEGGKILRSKGILAFQDDDDRYV
CCCCHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCH
FQGVHMMLEGDHQRKWKPDESRQSRVVFIGRELPEDAIREGFERCIVS
HHHHHHEEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]