| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342998
Identifier: 146342998
GI number: 146342998
Start: 6412515
End: 6413414
Strand: Reverse
Name: 146342998
Synonym: BRADO6182
Alternate gene names: NA
Gene position: 6413414-6412515 (Counterclockwise)
Preceding gene: 146342999
Following gene: 146342992
Centisome position: 86.01
GC content: 62.89
Gene sequence:
>900_bases ATGACAGTCAAGCGCGTAGTGTTCACCGGGGGGACGGGCAAGGCCGGCAGGCATGTGCTGCCGCATCTGCAGAGCAAGGG TTATCAGTTGCTCAATGTGGATCTCAAGCCGTTCGATCATCCCGGCATCAGCACGCTGATCGCCGACCTCTCCGACAGCG GGCAGGCGTTCAATGCGCTGACGACGCATTACGGTTTTGGCGGTTTCAACGCCGGCCGGCCGGCGCAGGCGCCGGACGCG GTCGTCCATTTCGCGGCGATCCCGCGCGTGCTGATCGCGCCCGACAACGAGACCTTCCGGGTCAACACGATCTCGACCTA CAACGTGATCGAGGCGGCCGCGAAGCTCGGCGTGCGCAAGATCATCATCGCCTCCAGCGAGACGACTTACGGCGTGTGCT TTGCCGAGGGCGACAAGGACTTCCACAGCTTTCCGCTCGAGGAGGATTACGACATCGACCCCATGGATTCCTACGGGCTG TCGAAGGTCGTGAACGAGAAGACCGCCCGCGCGTTCGCGATGCGCTACGGCATCGACATCTATTGTTTGCGGATCGGCAA CGTCATCGAGCCGCATGAATACGACATGTTTCCGCGCTTCCTCGCCGACCCGCCGTCACGCAAGCGCAATGCGTGGTCCT ACATCGACGCGCGCGACCTCGGCGAGATCGTGCATCTGGCGATTCAGAAGGACGGGCTCGGCTTCCAGGTGTTCAACGCG GTGAATGACACGGTGACCGCCAACATCCCGACCCGCGAATTGCTCCGGCGTTATTGTCCGAACGTGCCCGTCACCCGCGA GCTCGGCGAGCGCGAGGCGCCGCTGTCGAACCGCAAGGCGCGCGGGGTGCTCGGGTTCAAGGAAGAGCACGACTGGCGGA AATATGTGAAGGTGGGATAG
Upstream 100 bases:
>100_bases GAGCTGCTTGCTCCGGAGGTCGCTTCGGAGGTTCCTATGGATCGGCCATGAGCGAAGCTGATAGAACCGACCCGACGCAG TCAGAAGGATCACAACAACA
Downstream 100 bases:
>100_bases GTCGGAGCGATCTGCGCGACGATCGACGTCGCAGCCCTGCCTCTTTCCGTGGTCATGGCCGGGCTTGTCCCGGCCATCCA CGTCGCACCGCTCGCGAAGC
Product: putative UDP-glucose 4-epimerase
Products: NA
Alternate protein names: UDP-Glucose 4-Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; DTDP-Glucose 4 6-Dehydratase; UDP-Galactose 4-Epimerase; UDP-Glucose-4-Epimerase; NAD Dependent Epimerase/Dehydratase Family; Oxidoreductase Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerases; Epimerase/Dehydratase; Dehydratase/Oxidoreductase; Vegetative Cell Wall; Short Chain Dehydrogenase Family Protein; P Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase; Sugar Epimerase/Dehydratase-Like Protein
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTVKRVVFTGGTGKAGRHVLPHLQSKGYQLLNVDLKPFDHPGISTLIADLSDSGQAFNALTTHYGFGGFNAGRPAQAPDA VVHFAAIPRVLIAPDNETFRVNTISTYNVIEAAAKLGVRKIIIASSETTYGVCFAEGDKDFHSFPLEEDYDIDPMDSYGL SKVVNEKTARAFAMRYGIDIYCLRIGNVIEPHEYDMFPRFLADPPSRKRNAWSYIDARDLGEIVHLAIQKDGLGFQVFNA VNDTVTANIPTRELLRRYCPNVPVTRELGEREAPLSNRKARGVLGFKEEHDWRKYVKVG
Sequences:
>Translated_299_residues MTVKRVVFTGGTGKAGRHVLPHLQSKGYQLLNVDLKPFDHPGISTLIADLSDSGQAFNALTTHYGFGGFNAGRPAQAPDA VVHFAAIPRVLIAPDNETFRVNTISTYNVIEAAAKLGVRKIIIASSETTYGVCFAEGDKDFHSFPLEEDYDIDPMDSYGL SKVVNEKTARAFAMRYGIDIYCLRIGNVIEPHEYDMFPRFLADPPSRKRNAWSYIDARDLGEIVHLAIQKDGLGFQVFNA VNDTVTANIPTRELLRRYCPNVPVTRELGEREAPLSNRKARGVLGFKEEHDWRKYVKVG >Mature_298_residues TVKRVVFTGGTGKAGRHVLPHLQSKGYQLLNVDLKPFDHPGISTLIADLSDSGQAFNALTTHYGFGGFNAGRPAQAPDAV VHFAAIPRVLIAPDNETFRVNTISTYNVIEAAAKLGVRKIIIASSETTYGVCFAEGDKDFHSFPLEEDYDIDPMDSYGLS KVVNEKTARAFAMRYGIDIYCLRIGNVIEPHEYDMFPRFLADPPSRKRNAWSYIDARDLGEIVHLAIQKDGLGFQVFNAV NDTVTANIPTRELLRRYCPNVPVTRELGEREAPLSNRKARGVLGFKEEHDWRKYVKVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33303; Mature: 33172
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKRVVFTGGTGKAGRHVLPHLQSKGYQLLNVDLKPFDHPGISTLIADLSDSGQAFNAL CCCEEEEEECCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHH TTHYGFGGFNAGRPAQAPDAVVHFAAIPRVLIAPDNETFRVNTISTYNVIEAAAKLGVRK HHHCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCEEEEEEECHHHHHHHHHHCCEEE IIIASSETTYGVCFAEGDKDFHSFPLEEDYDIDPMDSYGLSKVVNEKTARAFAMRYGIDI EEEECCCCEEEEEEECCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEE YCLRIGNVIEPHEYDMFPRFLADPPSRKRNAWSYIDARDLGEIVHLAIQKDGLGFQVFNA EEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEC VNDTVTANIPTRELLRRYCPNVPVTRELGEREAPLSNRKARGVLGFKEEHDWRKYVKVG CCCCEEECCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure TVKRVVFTGGTGKAGRHVLPHLQSKGYQLLNVDLKPFDHPGISTLIADLSDSGQAFNAL CCEEEEEECCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHH TTHYGFGGFNAGRPAQAPDAVVHFAAIPRVLIAPDNETFRVNTISTYNVIEAAAKLGVRK HHHCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCCEEEEEEECHHHHHHHHHHCCEEE IIIASSETTYGVCFAEGDKDFHSFPLEEDYDIDPMDSYGLSKVVNEKTARAFAMRYGIDI EEEECCCCEEEEEEECCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEE YCLRIGNVIEPHEYDMFPRFLADPPSRKRNAWSYIDARDLGEIVHLAIQKDGLGFQVFNA EEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEC VNDTVTANIPTRELLRRYCPNVPVTRELGEREAPLSNRKARGVLGFKEEHDWRKYVKVG CCCCEEECCCHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA