| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is btuB [C]
Identifier: 146342515
GI number: 146342515
Start: 5875302
End: 5877632
Strand: Direct
Name: btuB [C]
Synonym: BRADO5677
Alternate gene names: 146342515
Gene position: 5875302-5877632 (Clockwise)
Preceding gene: 146342513
Following gene: 146342518
Centisome position: 78.79
GC content: 66.11
Gene sequence:
>2331_bases GTGGCGGCGATGCGGTGGCGTGGAGCAAGTGTCGGGGTGCTGTTGGCGGCATTGGCGCAACAGGCGGCCGCGCATCCCGA GCGCGTCCCGGCCGAACTGCCGACGGTCGATGTCGATGCGCCGAAGCGGACGACCAGGTCAAAGCCCAAGCCGCAGATCC GGCGTGACGCACAGCGGGCGCAGCCCGGCGTGTCTCGGATGCCGGTGACCCAGCCCTCGGCAGCCACAGCGGCCTCTGCG CCGTCAGGTGCGCCGAACGTCGGCTCTGGTGCCCCGCAAGTGCAGGGCATGGCGAGTGAGACGGTCATCACCGGCGACGA GATCAACGCCCGCCCGGCAACGCGTCCCGGGGAAGTGCTGGAGGCCGTGCCCGGCCTGATCGTCACGCAGCACTCCGGCG AAGGCAAAGCCAATCAGTATTTTCTGCGCGGCTACAATCTCGATCACGGCACCGATCTCGCGCTGTTCGTCGACGACGTG CCGGTCAACATGCGCACCCATGCGCACGGCCAGGGCTATGCCGATCTCAACTGGCTGATGCCCGAGACGATCGGCCGCGT CGACGTCCGCAAGGGCCCCTACTTCGCCGACGAAGGCGACTTCGCCTCGGTGGGCAGCGTGCATATCGGGCTGGTGGACA GCGTGCCCAAGGCGATCGCGCAGATGACGGCGGGCAGCTTCGGCTATCGCCGCTTCTTCGGCATGGACTCGGTGCATGCC GGCGATGGGCATCTCCTGATCGCAGGCGAGGCCGGCCGCTACGACGGCCCGTGGACCACGCCGGACGATGCCAAGAAGCT CAACGGCCTGATGCGCTATTCGCAGGGCACCGCGACCGACGGCTTCTCGATCACCGGCATGGCCTATGCGAACCGCTGGA CCTCGACCGACCAGGTGCCGGAGCGAGCGATCACCTCGGGCCTGCTCGGCCGCTATGACGCGATCGATCCAACCGACGGC GGCAAGACCAACCGCTTCGCCTTGTCAGGCCGCATCGCCGGCAGCGACGATGCCGGGTCCTGGAAGGCCAACGCCTATGT GGTGAAGAGCCAGCTCGACCTCTACAACAACTTCACCTATTGGTTGCGCGATCAGGATAATGGCGACCAGTTTCACCAGC ACGACGACCGGCTGATGCTCGGCGCCAACGCGTCGCGCACCTTGAACGGCAGCTTTGCAGGGCAGCCGATGGAGACGACG TTCGGCATCCAGACGCGCTACGACGACATCGCGCTGGCGCTGAGCTACACGGCGCAGCGAGCGTATCTGAGCTCCGTCCG CAACGACAAGGTCGGCGAAGGCAGCGTCGGAGTCTATGTTGAGAACACGGTGCGCTGGACCGACTGGCTGCGCACAACCA TCGGCTATCGCGGCGACTACTACCAGACCCACGTCTACTCGTACTTTAATGGCAACAACACCGGCGATGCCTCCGCGAGT CTCGGCAGCCCGAAATTCCGCATGGTGCTCGGGCCATTCAACCAGACCGAGTTCTTCCTCGGCGCCGGCTACGGCATGCA CAGCAACGATGCACGCGGCGCGACGACGACGGACGATCCGAACGCGCCGGGCAACCGGATCGACTCCTCGCCGCTGCTGG TCCGCACCAAGGGTGCCGAGGTCGGCGTGCGCACGCGCGTCATTCCGGGGCTCGACTCCTCGTTGAGCCTGTTCATGCTG AACCAGGATTCCGAGATCCTGTTCTCCGGCGATGCGGGCGACACCGAAGCCAGCCGGCCCAGCCGGCGCTACGGCTTCGA GTTCACCAATCACTATCGCCCGGCGTCGTGGGTCGACATCGATGCCGACCTCGCGATGACGCATGCCCGGTTCGTCGGCG AGGATGCCGATCAGGCGACGACCTATGCCCAGCTGGTCGGTTCGGGCGCGCCGTCCGAGGTGCTGCGCGGCAACGCGCCC GGCAACTACATCCCCAACGCGCCGTCGATGATCGCTTCCGCCGGCATCACGCTCGGGGAAAAGACCGGCTGGTTCGGCGG CGTCCGCTGGCGCTATCTCGGATCGACGCCGCTGACCGAGGACAACTACTTCCGTTCGACCGCCACAAGCATCTTCAACG GCCGTATCGGCTTCCGCGACGCCAATGGCTGGCGCATCCAGCTCGACGTGCTGAACCTGTTCAACACCAAGGCCAACCAG ATCTCCTATGGCTATGGCTCGCTGCTGCCGAGCGATCAGCTCTACGCGGATTGCTACGGGAGCGCGCCCAAAGGACTGCC CGCGCAAGTGTGCCAGACCGGCGTGATGGATCGCGTGCTACACCCGATCGAGCCGCTGACGTTTCGGGTGACGGTGGCGG GCACGTTCTGA
Upstream 100 bases:
>100_bases TCTCTAACACTCGACAGCGGGGCGATCCAAGCGAGCTTGTCACGAGCCGACGAGGGCTCGCGGCAGACGATGACGCGCGT CCCGCCTGGGATCGAGGGGC
Downstream 100 bases:
>100_bases TCTGGAGTGATCCCGTCCTTTTCTTGTTCACCACTTCCCGCAATCGAGCAGCGGGGACGTGTGTGCTCGTTGCGGGCTCG GAGCAGACTGGATCAGCAGC
Product: putative iron transport outer membrane receptor
Products: NA
Alternate protein names: NB-Dependent Receptor Plug; Nb-Dependent Receptor; Outer Membrane Protein; NB-Dependent Receptor-Like Protein; NB-Dependent Outer Membrane Receptor; Outer Membrane Receptor; Outer Membrane Receptor Signal Peptide Protein; Iron Transport Outer Membrane Receptor; Outer Membrane Recepter Signal Peptide Protein; Outer Membrane Receptor For Iron Transport; NB Dependent/Ligand-Gated Channel; NB-Dependent Receptor Cobalamin Transporter; NB-Dependent Receptor Plug Domain Protein
Number of amino acids: Translated: 776; Mature: 775
Protein sequence:
>776_residues MAAMRWRGASVGVLLAALAQQAAAHPERVPAELPTVDVDAPKRTTRSKPKPQIRRDAQRAQPGVSRMPVTQPSAATAASA PSGAPNVGSGAPQVQGMASETVITGDEINARPATRPGEVLEAVPGLIVTQHSGEGKANQYFLRGYNLDHGTDLALFVDDV PVNMRTHAHGQGYADLNWLMPETIGRVDVRKGPYFADEGDFASVGSVHIGLVDSVPKAIAQMTAGSFGYRRFFGMDSVHA GDGHLLIAGEAGRYDGPWTTPDDAKKLNGLMRYSQGTATDGFSITGMAYANRWTSTDQVPERAITSGLLGRYDAIDPTDG GKTNRFALSGRIAGSDDAGSWKANAYVVKSQLDLYNNFTYWLRDQDNGDQFHQHDDRLMLGANASRTLNGSFAGQPMETT FGIQTRYDDIALALSYTAQRAYLSSVRNDKVGEGSVGVYVENTVRWTDWLRTTIGYRGDYYQTHVYSYFNGNNTGDASAS LGSPKFRMVLGPFNQTEFFLGAGYGMHSNDARGATTTDDPNAPGNRIDSSPLLVRTKGAEVGVRTRVIPGLDSSLSLFML NQDSEILFSGDAGDTEASRPSRRYGFEFTNHYRPASWVDIDADLAMTHARFVGEDADQATTYAQLVGSGAPSEVLRGNAP GNYIPNAPSMIASAGITLGEKTGWFGGVRWRYLGSTPLTEDNYFRSTATSIFNGRIGFRDANGWRIQLDVLNLFNTKANQ ISYGYGSLLPSDQLYADCYGSAPKGLPAQVCQTGVMDRVLHPIEPLTFRVTVAGTF
Sequences:
>Translated_776_residues MAAMRWRGASVGVLLAALAQQAAAHPERVPAELPTVDVDAPKRTTRSKPKPQIRRDAQRAQPGVSRMPVTQPSAATAASA PSGAPNVGSGAPQVQGMASETVITGDEINARPATRPGEVLEAVPGLIVTQHSGEGKANQYFLRGYNLDHGTDLALFVDDV PVNMRTHAHGQGYADLNWLMPETIGRVDVRKGPYFADEGDFASVGSVHIGLVDSVPKAIAQMTAGSFGYRRFFGMDSVHA GDGHLLIAGEAGRYDGPWTTPDDAKKLNGLMRYSQGTATDGFSITGMAYANRWTSTDQVPERAITSGLLGRYDAIDPTDG GKTNRFALSGRIAGSDDAGSWKANAYVVKSQLDLYNNFTYWLRDQDNGDQFHQHDDRLMLGANASRTLNGSFAGQPMETT FGIQTRYDDIALALSYTAQRAYLSSVRNDKVGEGSVGVYVENTVRWTDWLRTTIGYRGDYYQTHVYSYFNGNNTGDASAS LGSPKFRMVLGPFNQTEFFLGAGYGMHSNDARGATTTDDPNAPGNRIDSSPLLVRTKGAEVGVRTRVIPGLDSSLSLFML NQDSEILFSGDAGDTEASRPSRRYGFEFTNHYRPASWVDIDADLAMTHARFVGEDADQATTYAQLVGSGAPSEVLRGNAP GNYIPNAPSMIASAGITLGEKTGWFGGVRWRYLGSTPLTEDNYFRSTATSIFNGRIGFRDANGWRIQLDVLNLFNTKANQ ISYGYGSLLPSDQLYADCYGSAPKGLPAQVCQTGVMDRVLHPIEPLTFRVTVAGTF >Mature_775_residues AAMRWRGASVGVLLAALAQQAAAHPERVPAELPTVDVDAPKRTTRSKPKPQIRRDAQRAQPGVSRMPVTQPSAATAASAP SGAPNVGSGAPQVQGMASETVITGDEINARPATRPGEVLEAVPGLIVTQHSGEGKANQYFLRGYNLDHGTDLALFVDDVP VNMRTHAHGQGYADLNWLMPETIGRVDVRKGPYFADEGDFASVGSVHIGLVDSVPKAIAQMTAGSFGYRRFFGMDSVHAG DGHLLIAGEAGRYDGPWTTPDDAKKLNGLMRYSQGTATDGFSITGMAYANRWTSTDQVPERAITSGLLGRYDAIDPTDGG KTNRFALSGRIAGSDDAGSWKANAYVVKSQLDLYNNFTYWLRDQDNGDQFHQHDDRLMLGANASRTLNGSFAGQPMETTF GIQTRYDDIALALSYTAQRAYLSSVRNDKVGEGSVGVYVENTVRWTDWLRTTIGYRGDYYQTHVYSYFNGNNTGDASASL GSPKFRMVLGPFNQTEFFLGAGYGMHSNDARGATTTDDPNAPGNRIDSSPLLVRTKGAEVGVRTRVIPGLDSSLSLFMLN QDSEILFSGDAGDTEASRPSRRYGFEFTNHYRPASWVDIDADLAMTHARFVGEDADQATTYAQLVGSGAPSEVLRGNAPG NYIPNAPSMIASAGITLGEKTGWFGGVRWRYLGSTPLTEDNYFRSTATSIFNGRIGFRDANGWRIQLDVLNLFNTKANQI SYGYGSLLPSDQLYADCYGSAPKGLPAQVCQTGVMDRVLHPIEPLTFRVTVAGTF
Specific function: Cobalamin Receptor Protein. Also Acts As A Receptor For Bacteriophage Bf23 And Is Necessary For The Uptake Of E Colicins. [C]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83840; Mature: 83709
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAMRWRGASVGVLLAALAQQAAAHPERVPAELPTVDVDAPKRTTRSKPKPQIRRDAQRA CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHCCCCCCHHHHHHHHHC QPGVSRMPVTQPSAATAASAPSGAPNVGSGAPQVQGMASETVITGDEINARPATRPGEVL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHH EAVPGLIVTQHSGEGKANQYFLRGYNLDHGTDLALFVDDVPVNMRTHAHGQGYADLNWLM HHCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEECCCCCCCCCEEECC PETIGRVDVRKGPYFADEGDFASVGSVHIGLVDSVPKAIAQMTAGSFGYRRFFGMDSVHA HHHCCCEECCCCCEECCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHCCCCCEEC GDGHLLIAGEAGRYDGPWTTPDDAKKLNGLMRYSQGTATDGFSITGMAYANRWTSTDQVP CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHH ERAITSGLLGRYDAIDPTDGGKTNRFALSGRIAGSDDAGSWKANAYVVKSQLDLYNNFTY HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEECEEEEEEEEHHHHCCCEE WLRDQDNGDQFHQHDDRLMLGANASRTLNGSFAGQPMETTFGIQTRYDDIALALSYTAQR EEEECCCCCHHHCCCCCEEEECCCCCEECCCCCCCCCCCEECCEECCCCEEEEEHHHHHH AYLSSVRNDKVGEGSVGVYVENTVRWTDWLRTTIGYRGDYYQTHVYSYFNGNNTGDASAS HHHHHHCCCCCCCCCEEEEEECCEEHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCC LGSPKFRMVLGPFNQTEFFLGAGYGMHSNDARGATTTDDPNAPGNRIDSSPLLVRTKGAE CCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC VGVRTRVIPGLDSSLSLFMLNQDSEILFSGDAGDTEASRPSRRYGFEFTNHYRPASWVDI CCEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCEEEC DADLAMTHARFVGEDADQATTYAQLVGSGAPSEVLRGNAPGNYIPNAPSMIASAGITLGE CHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCEECC KTGWFGGVRWRYLGSTPLTEDNYFRSTATSIFNGRIGFRDANGWRIQLDVLNLFNTKANQ CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEEEEEHHCCCCCE ISYGYGSLLPSDQLYADCYGSAPKGLPAQVCQTGVMDRVLHPIEPLTFRVTVAGTF EECCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECC >Mature Secondary Structure AAMRWRGASVGVLLAALAQQAAAHPERVPAELPTVDVDAPKRTTRSKPKPQIRRDAQRA CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHCCCCCCHHHHHHHHHC QPGVSRMPVTQPSAATAASAPSGAPNVGSGAPQVQGMASETVITGDEINARPATRPGEVL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHH EAVPGLIVTQHSGEGKANQYFLRGYNLDHGTDLALFVDDVPVNMRTHAHGQGYADLNWLM HHCCCEEEEECCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEECCCCCCCCCEEECC PETIGRVDVRKGPYFADEGDFASVGSVHIGLVDSVPKAIAQMTAGSFGYRRFFGMDSVHA HHHCCCEECCCCCEECCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHCCCCCEEC GDGHLLIAGEAGRYDGPWTTPDDAKKLNGLMRYSQGTATDGFSITGMAYANRWTSTDQVP CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCHHHH ERAITSGLLGRYDAIDPTDGGKTNRFALSGRIAGSDDAGSWKANAYVVKSQLDLYNNFTY HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEECEEEEEEEEHHHHCCCEE WLRDQDNGDQFHQHDDRLMLGANASRTLNGSFAGQPMETTFGIQTRYDDIALALSYTAQR EEEECCCCCHHHCCCCCEEEECCCCCEECCCCCCCCCCCEECCEECCCCEEEEEHHHHHH AYLSSVRNDKVGEGSVGVYVENTVRWTDWLRTTIGYRGDYYQTHVYSYFNGNNTGDASAS HHHHHHCCCCCCCCCEEEEEECCEEHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCC LGSPKFRMVLGPFNQTEFFLGAGYGMHSNDARGATTTDDPNAPGNRIDSSPLLVRTKGAE CCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC VGVRTRVIPGLDSSLSLFMLNQDSEILFSGDAGDTEASRPSRRYGFEFTNHYRPASWVDI CCEEEEECCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCEEEC DADLAMTHARFVGEDADQATTYAQLVGSGAPSEVLRGNAPGNYIPNAPSMIASAGITLGE CHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCEECC KTGWFGGVRWRYLGSTPLTEDNYFRSTATSIFNGRIGFRDANGWRIQLDVLNLFNTKANQ CCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEEEEEHHCCCCCE ISYGYGSLLPSDQLYADCYGSAPKGLPAQVCQTGVMDRVLHPIEPLTFRVTVAGTF EECCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA