| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is livK [C]
Identifier: 146342438
GI number: 146342438
Start: 5780755
End: 5781894
Strand: Reverse
Name: livK [C]
Synonym: BRADO5597
Alternate gene names: 146342438
Gene position: 5781894-5780755 (Counterclockwise)
Preceding gene: 146342439
Following gene: 146342437
Centisome position: 77.54
GC content: 64.39
Gene sequence:
>1140_bases GTGAGATCGATCATCCTGGCCGGACTGTGCTCCGCCGTACTGCTGTCAGGAGCCGCCTACGCGCAATCCGGCGCCCCCAT CAAGATCGCAAACGTCGCCGAGCTTTCCGGCGGCGGCGCGACCGTCGGTACCAACTGGAAGAACGGCATCGACCTCGCCG TCGAGGAAATCAACGCCAAGGGCGGCATCCTCGGCCGCAAGATCGAGGTCAGCCACGCCGACTCGCAGTCGAACCCCGGC GTCGCCCGCGCGCAGGTGCAGAAAGCGCTCGACAGCGAGCCCTACGTGCTGCTCGGGCCGGGCTATTCCGGCTCGGTGAA GGTGACCGCGCCGCTGGCCGCTGAAGCCGGCATCACCCAGATCATGGGCGGCGAGGCGGCCGAGCTGACGCAGGCCGGCA ACAAGTTCCTGTTCCGCACTTCGTTCGGCCAGCAGTCCTCGATGCCGAAGGTCGCCAAGTACATCAACGATGAGCTGAAG GCGAAGTCGGTCGCGGTGGTCTGGGTCAACAACGATTTCGGCCGCGGCGGGCGCGACGTCATCACCAAGGAGTTCAACCG TCTCGGCATCAAGGTCGCCGCGGACCTCTCGACCGAAGCGGGCCAGGCGGACTTCGCCGCCGACGTCAGCAAGATCAAGG CGGCGGCACCTGATGCCGTCTTCATCTACGTCAACGAGGAAGAGAGCGCGCGCATCCTGAAAGAGATCAAGCGCCAGGGC GTGACCGCGCCGCTGATCGGCGAGACCACGCTGGTCGGCCAGAAGGTGATCGAACTCGCCGGCGATGCCGCCAACGGCGC CCGCGGCCACGTCGGCCTCACGACCGATGCGCCGGTCGAGGCTATCAAGGCGTTCCGCGACCGCTTCGTGAAGAAGTACA ACTACGTGCCCGACCATAACGGCCTGAAGGGCTACCTCGCCATCTACATGGTCAAGGCCACGACCGAGAAAATGGGCAAG GTCGATTCCAAGGGCTTTGCCGATGCATTGCACGGCTTCACCATCAAGACCTCGGCCGAGCCGAACATCCTGATGGATGT CACCTTCGACCAGAACGGCGACATCGATCGCCAGGGCTTCCTGGTCGAGGTCGTCGAAGGCAAGCAGGTCGTCAAGCAGG TGCTGCCAAAGCTGAACTAA
Upstream 100 bases:
>100_bases CAGGCGGTTGACGCCGCCTGAGCCGACCGCCAATACGCGGCGGAACACATCGTTCAAGCAAGAAACGCAAACAAGCGTTT AGAGCAGAGGAGGAAACAAC
Downstream 100 bases:
>100_bases CGAGACCGGTCGATCTGCGGCGCTGGAGGGGGACTGTCCAGCGTCGCCGTCACCCAAGGGCTCACGGGGAAACGATGTCC AATCTGCTCGACCTGATCGT
Product: branched chain amino-acid ABC transporter substrate-binding protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MRSIILAGLCSAVLLSGAAYAQSGAPIKIANVAELSGGGATVGTNWKNGIDLAVEEINAKGGILGRKIEVSHADSQSNPG VARAQVQKALDSEPYVLLGPGYSGSVKVTAPLAAEAGITQIMGGEAAELTQAGNKFLFRTSFGQQSSMPKVAKYINDELK AKSVAVVWVNNDFGRGGRDVITKEFNRLGIKVAADLSTEAGQADFAADVSKIKAAAPDAVFIYVNEEESARILKEIKRQG VTAPLIGETTLVGQKVIELAGDAANGARGHVGLTTDAPVEAIKAFRDRFVKKYNYVPDHNGLKGYLAIYMVKATTEKMGK VDSKGFADALHGFTIKTSAEPNILMDVTFDQNGDIDRQGFLVEVVEGKQVVKQVLPKLN
Sequences:
>Translated_379_residues MRSIILAGLCSAVLLSGAAYAQSGAPIKIANVAELSGGGATVGTNWKNGIDLAVEEINAKGGILGRKIEVSHADSQSNPG VARAQVQKALDSEPYVLLGPGYSGSVKVTAPLAAEAGITQIMGGEAAELTQAGNKFLFRTSFGQQSSMPKVAKYINDELK AKSVAVVWVNNDFGRGGRDVITKEFNRLGIKVAADLSTEAGQADFAADVSKIKAAAPDAVFIYVNEEESARILKEIKRQG VTAPLIGETTLVGQKVIELAGDAANGARGHVGLTTDAPVEAIKAFRDRFVKKYNYVPDHNGLKGYLAIYMVKATTEKMGK VDSKGFADALHGFTIKTSAEPNILMDVTFDQNGDIDRQGFLVEVVEGKQVVKQVLPKLN >Mature_379_residues MRSIILAGLCSAVLLSGAAYAQSGAPIKIANVAELSGGGATVGTNWKNGIDLAVEEINAKGGILGRKIEVSHADSQSNPG VARAQVQKALDSEPYVLLGPGYSGSVKVTAPLAAEAGITQIMGGEAAELTQAGNKFLFRTSFGQQSSMPKVAKYINDELK AKSVAVVWVNNDFGRGGRDVITKEFNRLGIKVAADLSTEAGQADFAADVSKIKAAAPDAVFIYVNEEESARILKEIKRQG VTAPLIGETTLVGQKVIELAGDAANGARGHVGLTTDAPVEAIKAFRDRFVKKYNYVPDHNGLKGYLAIYMVKATTEKMGK VDSKGFADALHGFTIKTSAEPNILMDVTFDQNGDIDRQGFLVEVVEGKQVVKQVLPKLN
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=263, Percent_Identity=28.1368821292776, Blast_Score=88, Evalue=8e-19, Organism=Escherichia coli, GI1789867, Length=263, Percent_Identity=28.5171102661597, Blast_Score=82, Evalue=4e-17,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 40036; Mature: 40036
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSIILAGLCSAVLLSGAAYAQSGAPIKIANVAELSGGGATVGTNWKNGIDLAVEEINAK CCHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEEEECCCCCEECCCCCCCHHHEEEECCCC GGILGRKIEVSHADSQSNPGVARAQVQKALDSEPYVLLGPGYSGSVKVTAPLAAEAGITQ CCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCCHHH IMGGEAAELTQAGNKFLFRTSFGQQSSMPKVAKYINDELKAKSVAVVWVNNDFGRGGRDV HCCCCHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHH ITKEFNRLGIKVAADLSTEAGQADFAADVSKIKAAAPDAVFIYVNEEESARILKEIKRQG HHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCC VTAPLIGETTLVGQKVIELAGDAANGARGHVGLTTDAPVEAIKAFRDRFVKKYNYVPDHN CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCC GLKGYLAIYMVKATTEKMGKVDSKGFADALHGFTIKTSAEPNILMDVTFDQNGDIDRQGF CCCEEEEEEEEEHHHHHHCCCCCCCHHHHHCCEEEEECCCCCEEEEEEECCCCCCCCCCE LVEVVEGKQVVKQVLPKLN EEEECCCHHHHHHHHCCCC >Mature Secondary Structure MRSIILAGLCSAVLLSGAAYAQSGAPIKIANVAELSGGGATVGTNWKNGIDLAVEEINAK CCHHHHHHHHHHHHHCCCHHHCCCCCEEEEEEEEECCCCCEECCCCCCCHHHEEEECCCC GGILGRKIEVSHADSQSNPGVARAQVQKALDSEPYVLLGPGYSGSVKVTAPLAAEAGITQ CCEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCCCCHHH IMGGEAAELTQAGNKFLFRTSFGQQSSMPKVAKYINDELKAKSVAVVWVNNDFGRGGRDV HCCCCHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHH ITKEFNRLGIKVAADLSTEAGQADFAADVSKIKAAAPDAVFIYVNEEESARILKEIKRQG HHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCC VTAPLIGETTLVGQKVIELAGDAANGARGHVGLTTDAPVEAIKAFRDRFVKKYNYVPDHN CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCC GLKGYLAIYMVKATTEKMGKVDSKGFADALHGFTIKTSAEPNILMDVTFDQNGDIDRQGF CCCEEEEEEEEEHHHHHHCCCCCCCHHHHHCCEEEEECCCCCEEEEEEECCCCCCCCCCE LVEVVEGKQVVKQVLPKLN EEEECCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA