| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is feoB [H]
Identifier: 146342429
GI number: 146342429
Start: 5770131
End: 5772008
Strand: Direct
Name: feoB [H]
Synonym: BRADO5588
Alternate gene names: 146342429
Gene position: 5770131-5772008 (Clockwise)
Preceding gene: 146342428
Following gene: 146342431
Centisome position: 77.38
GC content: 66.67
Gene sequence:
>1878_bases ATGGATAGCCCTCTGCTGCATCTGGCCCTGGTGGGGACACCCAACAGCGGCAAGACATCCCTATTCAACGCCCTGACGGG CAGTCGTCAGAAGGTCGCGAACTATCCTGGCGTCACCGTCGAGCGCAAAGAGGGCGCGTTCGTGACGCCGCAGGGGCGCC AGGTCTCGCTGGTCGACCTCCCCGGCACCTATTCGCTGCGCGGCCGCAGCCCGGACGAGGAAATCACCCGCGATTTCGTC CTGGGACGGGCCACCGGCGAGGTTCTGCCGGACCTCGTATTGTGTGTTGCCGATTCCACCAACCTCCGGTTGACGATCCG CCTCTTGCTCGAGCTCAAGAGCACCGGACGACCGCTGGCGCTGGTTCTCAACATGTTCGACATCGCCAAGCGCCGCGGCG TGACGGTCGATGTCGCCGCCCTGTCGCAGGCGCTCGGCGTGCCCGTGGTGACCTCGATCGCCGTCCGCAAGGGCGGGACC GACGACCTGCTGCAGCTGACCGATCGGCTGCTGTCCGAGGCAACTGCGGCAAGCGGCGATCGCGCCAATACCTGGCGGCC GCTGACCGTGCCGGAGCTGCGCGCCACCCAGCGCGAGGCCGACCGCATCATCGCATCGACCGTCAGCCTGCCGGAGCGGC CCGACACCTGGACGGCACGGATCGATTCCGTCGCTTTGCATCCGGTCGGCGGCCTGGTCATCCTGCTGGCCATTCTGTTC ATCATGTTCCAGGGCGTGTTCGCCTGGGCGCAGCCCTTGATGCAGCTGCTGTCGGCGGCCTTCGACGCGCTCGGACAGCT GGTTCATGACCAGCTGCCTGAAGGCCTGCTGCAGAGCTTCCTGCAGAACGGCGTGATCTCCGGCGTCGGCAGCGTGATCG TCTTCCTGCCGCAGATCATCATCATCTTCCTGTTTATCCTGTTGCTCGAAGATTTCGGCTACATGGCGCGCGCGGCGTTC CTGATGGACCGCATCATGGGCGGCGCCGGCCTGCACGGCCGCGCCTTCATCCCGCTGCTGTCGAGCTTCGCCTGCGCCAT TCCCGGCATCATGGCGACGCGCGTGATCGACAACCGCCGCGACCGCCTGACCACGATCCTGATCGCGCCGCTGATGACCT GCTCGGCACGCATCCCGGTCTATACGCTGATCATCTCGGCCTTCATCCCGCCGACCAAGGTCTGGGGCCTGATCAATCTG CAGGGCCTCGTGATGTTCGGGCTCTATGCGGCCGGGATCGTCAGCGCGCTGCTGGTGTCGTTCCTGGTCAAGTTCTTCCT GATGCGCGACTACCAGCCGGCGCCGTTCATGCTCGAGCTGCCCGACTACAAGATGCCGCGGCTGCGCAGCATCGCGATCG GCGTCTACACCCGCGCCAAGATGTTCCTGCAGCGCGCCGGCACCACGATCTTCGCGATGATGGTGCTGATCTGGTTCCTG GCCTCGTTCCCGCAGCCGCCTGCCGCCGCCACCGAGCCGGCGATCAATTACAGCCTGGCCGCGATGATCGGCCAGGCCAT TGCGCCGCTGCTCCATCCGGTCGGCTTCAACTGGCAGATCGCGGTGGCGCTGGTGCCGGGCATGGCGGCCCGCGAGGTCG CTGTGGCGGCGCTCGGCACGGTCTACGCGATCGAGGGCGGCAAGGAGGCGGCTGAGCAGATCGGCCAGGTGCTGGCCACC AAATGGAGCCTCGCGACCGCGCTGGCGCTGCTCGCCTGGTACATCTTCGCGCCGCAATGCGCTTCCACGCTCGCTGTCAT CCGCCGCGAGACCGGCAGCTGGCGCTGGATGGCAGTGACCTTCTTCTACATGTTCGCGCTGGCCTATGCGGCGGCATTCG CGACCTACCACATCGCGGTGGCGATGGGCGCGGGCTGA
Upstream 100 bases:
>100_bases GGATCCGATCGCCGTCCGGGTCGACAACATCACCGTCGCGGTCCGCCGGCGCGAGGCCATGGCCGTCATCGTGGCGTAGG CCGCGCGGGAAGCGTCGACC
Downstream 100 bases:
>100_bases GCCCACGCCCATCGGCCTCATCGCGCGATATGCAGCGCGAAGCCGTGGGCGTCGGAATCGCCAAGCCCGGGACGCAGCTG CATCGACGGGATCAGATAGT
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 625; Mature: 625
Protein sequence:
>625_residues MDSPLLHLALVGTPNSGKTSLFNALTGSRQKVANYPGVTVERKEGAFVTPQGRQVSLVDLPGTYSLRGRSPDEEITRDFV LGRATGEVLPDLVLCVADSTNLRLTIRLLLELKSTGRPLALVLNMFDIAKRRGVTVDVAALSQALGVPVVTSIAVRKGGT DDLLQLTDRLLSEATAASGDRANTWRPLTVPELRATQREADRIIASTVSLPERPDTWTARIDSVALHPVGGLVILLAILF IMFQGVFAWAQPLMQLLSAAFDALGQLVHDQLPEGLLQSFLQNGVISGVGSVIVFLPQIIIIFLFILLLEDFGYMARAAF LMDRIMGGAGLHGRAFIPLLSSFACAIPGIMATRVIDNRRDRLTTILIAPLMTCSARIPVYTLIISAFIPPTKVWGLINL QGLVMFGLYAAGIVSALLVSFLVKFFLMRDYQPAPFMLELPDYKMPRLRSIAIGVYTRAKMFLQRAGTTIFAMMVLIWFL ASFPQPPAAATEPAINYSLAAMIGQAIAPLLHPVGFNWQIAVALVPGMAAREVAVAALGTVYAIEGGKEAAEQIGQVLAT KWSLATALALLAWYIFAPQCASTLAVIRRETGSWRWMAVTFFYMFALAYAAAFATYHIAVAMGAG
Sequences:
>Translated_625_residues MDSPLLHLALVGTPNSGKTSLFNALTGSRQKVANYPGVTVERKEGAFVTPQGRQVSLVDLPGTYSLRGRSPDEEITRDFV LGRATGEVLPDLVLCVADSTNLRLTIRLLLELKSTGRPLALVLNMFDIAKRRGVTVDVAALSQALGVPVVTSIAVRKGGT DDLLQLTDRLLSEATAASGDRANTWRPLTVPELRATQREADRIIASTVSLPERPDTWTARIDSVALHPVGGLVILLAILF IMFQGVFAWAQPLMQLLSAAFDALGQLVHDQLPEGLLQSFLQNGVISGVGSVIVFLPQIIIIFLFILLLEDFGYMARAAF LMDRIMGGAGLHGRAFIPLLSSFACAIPGIMATRVIDNRRDRLTTILIAPLMTCSARIPVYTLIISAFIPPTKVWGLINL QGLVMFGLYAAGIVSALLVSFLVKFFLMRDYQPAPFMLELPDYKMPRLRSIAIGVYTRAKMFLQRAGTTIFAMMVLIWFL ASFPQPPAAATEPAINYSLAAMIGQAIAPLLHPVGFNWQIAVALVPGMAAREVAVAALGTVYAIEGGKEAAEQIGQVLAT KWSLATALALLAWYIFAPQCASTLAVIRRETGSWRWMAVTFFYMFALAYAAAFATYHIAVAMGAG >Mature_625_residues MDSPLLHLALVGTPNSGKTSLFNALTGSRQKVANYPGVTVERKEGAFVTPQGRQVSLVDLPGTYSLRGRSPDEEITRDFV LGRATGEVLPDLVLCVADSTNLRLTIRLLLELKSTGRPLALVLNMFDIAKRRGVTVDVAALSQALGVPVVTSIAVRKGGT DDLLQLTDRLLSEATAASGDRANTWRPLTVPELRATQREADRIIASTVSLPERPDTWTARIDSVALHPVGGLVILLAILF IMFQGVFAWAQPLMQLLSAAFDALGQLVHDQLPEGLLQSFLQNGVISGVGSVIVFLPQIIIIFLFILLLEDFGYMARAAF LMDRIMGGAGLHGRAFIPLLSSFACAIPGIMATRVIDNRRDRLTTILIAPLMTCSARIPVYTLIISAFIPPTKVWGLINL QGLVMFGLYAAGIVSALLVSFLVKFFLMRDYQPAPFMLELPDYKMPRLRSIAIGVYTRAKMFLQRAGTTIFAMMVLIWFL ASFPQPPAAATEPAINYSLAAMIGQAIAPLLHPVGFNWQIAVALVPGMAAREVAVAALGTVYAIEGGKEAAEQIGQVLAT KWSLATALALLAWYIFAPQCASTLAVIRRETGSWRWMAVTFFYMFALAYAAAFATYHIAVAMGAG
Specific function: It seems that the Fe(2+) uptake in C.jejuni cannot be attributed to feoB [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=733, Percent_Identity=32.4693042291951, Blast_Score=299, Evalue=3e-82,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011642 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 67636; Mature: 67636
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSPLLHLALVGTPNSGKTSLFNALTGSRQKVANYPGVTVERKEGAFVTPQGRQVSLVDL CCCCEEEEEEEECCCCCCHHHHHHHCCCHHHHCCCCCCEEECCCCCEECCCCCEEEEEEC PGTYSLRGRSPDEEITRDFVLGRATGEVLPDLVLCVADSTNLRLTIRLLLELKSTGRPLA CCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCEEHHHHHHHHHCCCCHHH LVLNMFDIAKRRGVTVDVAALSQALGVPVVTSIAVRKGGTDDLLQLTDRLLSEATAASGD HHHHHHHHHHHCCCEEEHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC RANTWRPLTVPELRATQREADRIIASTVSLPERPDTWTARIDSVALHPVGGLVILLAILF CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEECCHHHHHHHHHHHH IMFQGVFAWAQPLMQLLSAAFDALGQLVHDQLPEGLLQSFLQNGVISGVGSVIVFLPQII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHH IIFLFILLLEDFGYMARAAFLMDRIMGGAGLHGRAFIPLLSSFACAIPGIMATRVIDNRR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCH DRLTTILIAPLMTCSARIPVYTLIISAFIPPTKVWGLINLQGLVMFGLYAAGIVSALLVS HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLVKFFLMRDYQPAPFMLELPDYKMPRLRSIAIGVYTRAKMFLQRAGTTIFAMMVLIWFL HHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH ASFPQPPAAATEPAINYSLAAMIGQAIAPLLHPVGFNWQIAVALVPGMAAREVAVAALGT HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHH VYAIEGGKEAAEQIGQVLATKWSLATALALLAWYIFAPQCASTLAVIRRETGSWRWMAVT HEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHH FFYMFALAYAAAFATYHIAVAMGAG HHHHHHHHHHHHHHHHHHHEEECCC >Mature Secondary Structure MDSPLLHLALVGTPNSGKTSLFNALTGSRQKVANYPGVTVERKEGAFVTPQGRQVSLVDL CCCCEEEEEEEECCCCCCHHHHHHHCCCHHHHCCCCCCEEECCCCCEECCCCCEEEEEEC PGTYSLRGRSPDEEITRDFVLGRATGEVLPDLVLCVADSTNLRLTIRLLLELKSTGRPLA CCCEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHEECCCCCEEHHHHHHHHHCCCCHHH LVLNMFDIAKRRGVTVDVAALSQALGVPVVTSIAVRKGGTDDLLQLTDRLLSEATAASGD HHHHHHHHHHHCCCEEEHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC RANTWRPLTVPELRATQREADRIIASTVSLPERPDTWTARIDSVALHPVGGLVILLAILF CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEECCHHHHHHHHHHHH IMFQGVFAWAQPLMQLLSAAFDALGQLVHDQLPEGLLQSFLQNGVISGVGSVIVFLPQII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHH IIFLFILLLEDFGYMARAAFLMDRIMGGAGLHGRAFIPLLSSFACAIPGIMATRVIDNRR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHCCH DRLTTILIAPLMTCSARIPVYTLIISAFIPPTKVWGLINLQGLVMFGLYAAGIVSALLVS HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLVKFFLMRDYQPAPFMLELPDYKMPRLRSIAIGVYTRAKMFLQRAGTTIFAMMVLIWFL HHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH ASFPQPPAAATEPAINYSLAAMIGQAIAPLLHPVGFNWQIAVALVPGMAAREVAVAALGT HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHH VYAIEGGKEAAEQIGQVLATKWSLATALALLAWYIFAPQCASTLAVIRRETGSWRWMAVT HEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHH FFYMFALAYAAAFATYHIAVAMGAG HHHHHHHHHHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10688204 [H]