| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342400
Identifier: 146342400
GI number: 146342400
Start: 5743236
End: 5744360
Strand: Direct
Name: 146342400
Synonym: BRADO5558
Alternate gene names: NA
Gene position: 5743236-5744360 (Clockwise)
Preceding gene: 146342394
Following gene: 146342409
Centisome position: 77.02
GC content: 65.96
Gene sequence:
>1125_bases ATGAGCGCCAACGTGCATCAGCCAGAACAGCTTCCGCCTTCAGAACACTCGATCATCAGCGAACTCGAGGACGCCGTCCG CAGCGGCTCGTCCGAGAAACGTGTCAACACGCTCCGCCAGGTCACCAATCTGTTCCTGCACGATGGCGAACGCCTGAGCG AGGACCAGATCAAAGTGTTCGACAACGTGCTGTGCATGCTGGTCTCGCGCGTCGAGACCCGGGCGCGCGCCGAGCTCAGC AAGCATCTCGCCCCGGTCGATTATGCCCCGATCGACGTCATCCAGCAGCTGGCGCGCGACGACGAGATCTCGGTCGCCGA GAGCGTGCTGATGCACTCCACCCGCCTGACGGAGCACACGCTGGTCGAGGTCGCGACGACCAAGGGCCAGGACCACCTGA TGGCGATCTCGAGCCGTCCGCATCTGACCGAGGCCGTCACCGACATCATCGTCGATCGCGGCGAACGCCGTGTCATCCGC AAGCTCGCCAACAACCAGACCGCCCGCTTCTCCGAGACCGGCTACTCGGGGATGATGGCGCACGCCGAGGATGACGACGA GCTGACCGAGATCATCGGGCTGCGCGTCGACCTGCCCAGCAAACACCTGCGCGACCTCCTGCGCCGCGCCACCGACTCCG TTCGCGCCAAGCTGATGGCGTCGGCGCCGCCGGCGCTGCAACAGGAGATCAAGAAGGTCCTCAAGGGGATCGCGGATGCT GCGCGCAGTGATGGCGGCCTGATCGGCCGCGACTTCACGCTGGCCGAAGAGGCGGTCAAGCGCATGAAGGGGCTGAACGA GCTGAATGACTCCGCGATCGGCTTCTTCGCCGAGACCCGCCGCTTCGGCGAGGTCGCAGCCGCGCTCGGCCTGCTCAACA ACGTGCCCACCGAGATGATGGCCAAGGTGCTGGAAGGCCCGCGCACCGACATCGTCCTGATCCCCTGCCGCGCCGCCGGC CTGAGCTGGTCGGTGGTGGCGAAGATCCTGACCCACCGCCCGATCAAGCACGCCATCGACAGCGAGACCCTCAAGCTCGC CGAACGCGACTACGGCCGCCTGTCGCTCGACACCGCCCAGCGCACCCTGCGGTTCTGGATGGTGCACAACAAGGTGGAGA AGTGA
Upstream 100 bases:
>100_bases CCTAACGCATTGTTATCGCCCATGGCGAAAACTGGTTCCGCCGGGGAAACCTGCAGTGGACCAGACGCGCGTCGCTGCCG CTCCCGGACATCCGGACCAG
Downstream 100 bases:
>100_bases GCGGGACGGGCGAGCTCCCCTGAATTGATGCATCATCCTCCGTCGCAACCTCATCCCCCGCTGTCGTCCCGGCGAACGCC GGGACCCATACCGCGTGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MSANVHQPEQLPPSEHSIISELEDAVRSGSSEKRVNTLRQVTNLFLHDGERLSEDQIKVFDNVLCMLVSRVETRARAELS KHLAPVDYAPIDVIQQLARDDEISVAESVLMHSTRLTEHTLVEVATTKGQDHLMAISSRPHLTEAVTDIIVDRGERRVIR KLANNQTARFSETGYSGMMAHAEDDDELTEIIGLRVDLPSKHLRDLLRRATDSVRAKLMASAPPALQQEIKKVLKGIADA ARSDGGLIGRDFTLAEEAVKRMKGLNELNDSAIGFFAETRRFGEVAAALGLLNNVPTEMMAKVLEGPRTDIVLIPCRAAG LSWSVVAKILTHRPIKHAIDSETLKLAERDYGRLSLDTAQRTLRFWMVHNKVEK
Sequences:
>Translated_374_residues MSANVHQPEQLPPSEHSIISELEDAVRSGSSEKRVNTLRQVTNLFLHDGERLSEDQIKVFDNVLCMLVSRVETRARAELS KHLAPVDYAPIDVIQQLARDDEISVAESVLMHSTRLTEHTLVEVATTKGQDHLMAISSRPHLTEAVTDIIVDRGERRVIR KLANNQTARFSETGYSGMMAHAEDDDELTEIIGLRVDLPSKHLRDLLRRATDSVRAKLMASAPPALQQEIKKVLKGIADA ARSDGGLIGRDFTLAEEAVKRMKGLNELNDSAIGFFAETRRFGEVAAALGLLNNVPTEMMAKVLEGPRTDIVLIPCRAAG LSWSVVAKILTHRPIKHAIDSETLKLAERDYGRLSLDTAQRTLRFWMVHNKVEK >Mature_373_residues SANVHQPEQLPPSEHSIISELEDAVRSGSSEKRVNTLRQVTNLFLHDGERLSEDQIKVFDNVLCMLVSRVETRARAELSK HLAPVDYAPIDVIQQLARDDEISVAESVLMHSTRLTEHTLVEVATTKGQDHLMAISSRPHLTEAVTDIIVDRGERRVIRK LANNQTARFSETGYSGMMAHAEDDDELTEIIGLRVDLPSKHLRDLLRRATDSVRAKLMASAPPALQQEIKKVLKGIADAA RSDGGLIGRDFTLAEEAVKRMKGLNELNDSAIGFFAETRRFGEVAAALGLLNNVPTEMMAKVLEGPRTDIVLIPCRAAGL SWSVVAKILTHRPIKHAIDSETLKLAERDYGRLSLDTAQRTLRFWMVHNKVEK
Specific function: Unknown
COG id: COG5330
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41622; Mature: 41491
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANVHQPEQLPPSEHSIISELEDAVRSGSSEKRVNTLRQVTNLFLHDGERLSEDQIKVF CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH DNVLCMLVSRVETRARAELSKHLAPVDYAPIDVIQQLARDDEISVAESVLMHSTRLTEHT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LVEVATTKGQDHLMAISSRPHLTEAVTDIIVDRGERRVIRKLANNQTARFSETGYSGMMA HHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCC HAEDDDELTEIIGLRVDLPSKHLRDLLRRATDSVRAKLMASAPPALQQEIKKVLKGIADA CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ARSDGGLIGRDFTLAEEAVKRMKGLNELNDSAIGFFAETRRFGEVAAALGLLNNVPTEMM HCCCCCCCCCCHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AKVLEGPRTDIVLIPCRAAGLSWSVVAKILTHRPIKHAIDSETLKLAERDYGRLSLDTAQ HHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEHHHHH RTLRFWMVHNKVEK HHHHHHHHHHHCCC >Mature Secondary Structure SANVHQPEQLPPSEHSIISELEDAVRSGSSEKRVNTLRQVTNLFLHDGERLSEDQIKVF CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH DNVLCMLVSRVETRARAELSKHLAPVDYAPIDVIQQLARDDEISVAESVLMHSTRLTEHT HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH LVEVATTKGQDHLMAISSRPHLTEAVTDIIVDRGERRVIRKLANNQTARFSETGYSGMMA HHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCC HAEDDDELTEIIGLRVDLPSKHLRDLLRRATDSVRAKLMASAPPALQQEIKKVLKGIADA CCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ARSDGGLIGRDFTLAEEAVKRMKGLNELNDSAIGFFAETRRFGEVAAALGLLNNVPTEMM HCCCCCCCCCCHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AKVLEGPRTDIVLIPCRAAGLSWSVVAKILTHRPIKHAIDSETLKLAERDYGRLSLDTAQ HHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEHHHHH RTLRFWMVHNKVEK HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA